| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 2,045,633 | IS1 (–) +9 bp | coding (652‑660/1086 nt) | rfbB ← | dTDP‑glucose 4,6 dehydratase, NAD(P)‑binding |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 1974039 | NA (NA) | 54 (1.090) | 38/150 | 0.3 | 88.8% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | REL606 | = 2045641 | 6 (0.140) | coding (652/1086 nt) | rfbB | dTDP‑glucose 4,6 dehydratase, NAD(P)‑binding | |||||
| * | ? | REL606 | = 2035093 | NA (NA) | 77 (1.560) | 50/150 | 0.0 | 91.8% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | REL606 | 2045633 = | 6 (0.140) | coding (660/1086 nt) | rfbB | dTDP‑glucose 4,6 dehydratase, NAD(P)‑binding | |||||
TCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1973965‑1974039‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTAAGGCATTACCTATTTATGGCAAAGGAGATCAGATCCGCGACTGGTTGTATGTAGAGGATCATGCTCGAGC < REL606/2045641‑2045568 TCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCG < 1:890798/76‑1TCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCG < 1:192437/76‑1TCGGTGGAGCTGCATGACAAAGACATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCG > 2:1456017/1‑76 CGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGATCATAAAACACTATCAATAAGTTGGAGTCATTACCGG < 2:1333663/76‑1 CGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGG > 1:960781/1‑76 GGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGGT < 1:1325070/76‑1 GTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGGTA < 2:785882/76‑1 TGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGGTAA > 2:1351114/1‑76 TGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGGTAA > 1:422553/1‑76 GGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGGTAAG < 2:133520/76‑1 GCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGGTAAGGCATTA < 1:1323557/76‑1 GACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGGTAAGGCATTACCTA > 1:488280/1‑76 GACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGGTAAGGCATTACCTA > 1:488295/1‑76 ACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGGTAAGGCATTACCTAT > 1:832157/1‑76 AAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGGTAAGGCATTACCTATTT < 2:112142/76‑1 AAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGGTAAGGCATTACCTATTT > 2:1328387/1‑76 AAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGGTAAGGCATTACCTATTTA > 1:1003526/1‑76 ATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGGTAAGGCATTACCTATTTATGGCA < 1:1143352/76‑1 GCATTATCTGAACATAAAACACTATCACTAAGTTGGAGTCATTACCGGTAAGGCATTACCTATTTATGGCAAAGGA > 2:1405361/1‑76 CATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGGTAAGGCATTACCTATTTATGGCAAAGGAG > 1:1482194/1‑76 ATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGGTAAGGCATTACCTATTTATGGCAAAGGAGA > 2:425645/1‑76 TTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGGTAAGGCATTACCTATTTATGGCAAAGGAGAT > 1:566592/1‑76 TTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGGTAAGGCATTACCTATTTATGGCAAAGGAGAT < 2:1360097/76‑1 TTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGGTAAGGCATTACCTATTTATGGCAAAGGAGAT > 1:292360/1‑76 TATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGGTAAGGCATTACCTATTTATGGCAAAGGAGATC < 1:431621/76‑1 ATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGGTAAGGCATTACCTATTTATGGCAAAGGAGATCA < 1:583225/76‑1 ATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGGTAAGGCATTACCTATTTATGGCAAAGGAGATCA < 1:608668/76‑1 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGGTAAGGCATTACCTATTTATGGCAAAGGAGATCAG > 1:1428991/1‑76 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGGTAAGGCATTACCTATTTATGGCAAAGGAGATCAGA < 1:828198/76‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGGTAAGGCATTACCTATTTATGGCAAAGGAGATCAGA > 1:1354986/1‑76 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGGTAAGGCATTACCTATTTATGGCAAAGGAGATCAGA > 1:303624/1‑76 AACATAAAACACTATCAATAAGTTGGAGTCATTACCGGTAAGGCATTACCTATTTATGGCAAAGGAGATCAGATCC > 2:542654/1‑76 TAAAACACTATCAATAAGTTGGAGTCATTACCGGTAAGGCATTACCTATTTATGGCAAAGGAGATCAGATCCGCGA > 2:1429328/1‑76 AAAACACTATCAATAAGTTGGAGTCATTACCGGTAAGGCATTACCTATTTATGGCAAAGGAGATCAGATCCGCGAC > 1:585574/1‑76 ATCAATAAGTTGGAGTCATTACCGGTAAGGCATTACCTATTTATGGCAAAGGAGATCAGATCCGCGACTGGTTGTA > 1:755576/1‑76 CAATAAGTTGGAGTCATTACCGGTAAGGCATTACCTATTTATGGCAAAGGAGATCAGATCCGCGACTGGTTGTATG > 2:1511836/1‑76 ATAAGTTGGAGTCATTACCGGTAAGGCATTACCTATTTATGGCAAAGGAGATCAGATCCGCGACTGGTTGTATGTA > 2:790842/1‑76 ATAAGTTGGAGTCATTACCGGTAAGGCATTACCTATTTATGGCAAAGGAGATCAGATCCGCGACTGGTTGTATGTA < 2:934260/76‑1 ATAAGTTGGAGTCATTACCGGTAAGGCATTACCTATTTATGGCAAAGGAGATCAGATCCGCGACTGGTTGTATGTA > 1:1155373/1‑76 ATAAGTTGGAGTCATTACCGGTAAGGCATTACCTATTTACGGCAAAGGAGATCAGATCCGCGACTGGTTGTATGTA > 2:790833/1‑76 TAAGTTGGAGTCATTACCGGTAAGGCATTACCTATTTATGGCAAAGGAGATCAGATCCGCGACTGGTTGTATGTAG > 2:1378127/1‑76 AAGTTGGAGTCATTACCGGTAAGGCATTACCTATTTATGGCAAAGGAGATCAGATCCGCGACTGGTTGTATGTAGA > 1:471890/1‑76 AAGTTGGAGTCATTACCGGTAAGGCATTACCTATTTATGGCAAAGGAGATCAGATCCGCGACTGGTTGTATGTAGA < 2:639006/76‑1 GTTGGAGTCATTACCGGTAAGGCATTACCTATTTATGGCAAAGGAGATCAGATCCGCGACTGGTTGTATGTAGAGG < 1:662331/76‑1 TTGGAGTCATTACCGGTAAGGCATTACCTATTTATGGCAAAGGAGATCAGATCCGCGACTGGTTGTATGTAGAGGA > 1:1490114/1‑76 GAGTCATTACCGGTAAGGCATTACCTATTTATGGCAAAGGAGATCAGATCCGCGACTGGTTGTATGTAGAGGATCA < 1:837370/76‑1 AGTCATTACCGGTAAGGCATTACCTATTTATGGCAAAGGAGATCAGATCCGCGACTGGTTGTATGTAGAGGATCAT < 1:1065045/76‑1 TCATTACCGGTAAGGCATTACCTATTTATGGCAAAGGAGATCAGATCCGCGACTGGTTGTATGTAGAGGATCATGC > 2:326110/1‑76 ATTACCGGTAAGGCATTACCTATTTATGGCAAAGGAGATCAGATCCGCGACTGGTTGTATGTAGAGGATCATGCTC < 1:1330789/76‑1 ACCGGTAAGGCATTACCTTTTAAGGGCAAAGGATGTAAGATCCGCGGCTGGTTGTATGTAGAGGATCATGCTCGAG < 1:722886/76‑1 ACCGGTAAGGCATTACCTATTTATGGCAAAGGAGATCAGATCCGCGACTGGTTGTATGTAGAGGATCATGCTCGAG < 1:714927/76‑1 ACCGGTAAGGCATTACCTATTTATGGCAAAGGAGATCAGATCCGCGACTGGTTGTATGTAGAGGATCATGCTCGAG < 2:225395/76‑1 ACCGGTAAGGCATTACCTATTTATGGCAAAGGAGATCAGAGCCGCGACTGGTTGTATGTAGAGGATCATGCTCGAG < 2:1449248/76‑1 CCGGTAAGGCATTACCTATTTATGGCAAAGGAGATCAGATCCGCGACTGGTTGTATGTAGAGGATCATGCTCGAGC > 2:1118783/1‑76 TCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1973965‑1974039‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTAAGGCATTACCTATTTATGGCAAAGGAGATCAGATCCGCGACTGGTTGTATGTAGAGGATCATGCTCGAGC < REL606/2045641‑2045568 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |