| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 2,045,633 | IS1 (–) +9 bp | coding (652‑660/1086 nt) | rfbB ← | dTDP‑glucose 4,6 dehydratase, NAD(P)‑binding |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 1974039 | NA (NA) | 54 (1.090) | 38/150 | 0.3 | 88.8% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | REL606 | = 2045641 | 6 (0.140) | coding (652/1086 nt) | rfbB | dTDP‑glucose 4,6 dehydratase, NAD(P)‑binding | |||||
| * | ? | REL606 | = 2035093 | NA (NA) | 77 (1.560) | 50/150 | 0.0 | 91.8% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | REL606 | 2045633 = | 6 (0.140) | coding (660/1086 nt) | rfbB | dTDP‑glucose 4,6 dehydratase, NAD(P)‑binding | |||||
Only 100 of 136 total aligned reads displayed.
GGTATATAACGCTCGAGCATGATCCTCTACATACAACCAGTCGCGGATCTGATCTCCTTTGCCATAAATAGGTAATGCCTTACCTTCCAGTGCATTAAGAATAACCAGTGGAATAAGCTTTTCCGGGAAATGATAAGGACCATAGTTGT > REL606/2045558‑2045706 | ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacct < 1:925510‑M2/1‑1 (MQ=255)ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacct < 2:747180‑M2/1‑1 (MQ=255)ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacct > 2:454074‑M2/76‑76 (MQ=255)ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacct > 1:1563339‑M2/76‑76 (MQ=255)ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacct > 2:279580‑M2/76‑76 (MQ=255)cggatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacct < 2:835821‑M2/1‑1 (MQ=255) tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTg < 1:964521‑M2/2‑1 (MQ=255) tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTg > 1:1153048‑M2/75‑76 (MQ=255) gTATATAACGCTCGAGCATGATCCTCTACATACAACCAGTCGCGGATCTGATCTCCTTTGCCATAAATAGGTAATg < 2:1123977/76‑1 (MQ=255) gTATATAACGCTCGAGCATGATCCTCTACATACAACCAGTCGCGGATCTGATCTCCTTTGCCATAAATAGGTAATg < 2:1148588/76‑1 (MQ=255) gTATATAACGCTCGAGCATGATCCTCTACATACAACCAGTCGCGGATCTGATCTCCTTTGCCATAAATAGGTAATg < 2:22676/76‑1 (MQ=255) tatataACGCTCGAGCATGATCCTCTACATACAACCAGTCGCGGATCTGATCTCCTTTGCCATAAATAGGTAATGc > 2:1374732/1‑76 (MQ=255) atagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTGcc > 1:645238‑M2/73‑76 (MQ=255) tataACGCTCGAGCATGATCCTCTACATACAACCAGTCGCGGATCTGATCTCCTTTGCCATAAATAGGTAATGCCt > 2:1514212/1‑76 (MQ=255) ataACGCTCGAGCATGATCCTCTACATACAACCAGTCGCGGATCTGATCTCCTTTGCCATAAATAGGTAATGCCtt > 1:573142/1‑76 (MQ=255) gaaccagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTGCCTTa < 1:425327‑M2/7‑1 (MQ=255) gaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTGCCTTa < 1:977475‑M2/7‑1 (MQ=255) aaacagaagccactggagcaccacaaaaacaccatcatccactaaatcagtaagttggcagcatcaccTGCCTTAc > 2:1224818‑M2/69‑76 (MQ=255) gCTCGAGCATGATCCTCTACATACAACCAGTCGCGGATCTGATCTCCTTTGCCATAAATAGGTAATGCCTTACCgg > 2:1118783‑M2/1‑74 (MQ=255) cTCGAGCATGATCCTCTACATACAACCAGTCGCGGCTCTGATCTCCTTTGCCATAAATAGGTAATGCCTTACCggt < 2:1449248‑M2/76‑4 (MQ=255) cTCGAGCATGATCCTCTACATACAACCAGTCGCGGATCTGATCTCCTTTGCCATAAATAGGTAATGCCTTACCggt < 2:225395‑M2/76‑4 (MQ=255) cTCGAGCATGATCCTCTACATACAACCAGCCGCGGATCTTACATCCTTTGCCCTTAAAAGGTAATGCCTTACCggt < 1:722886‑M2/76‑4 (MQ=255) agaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTGCCTTACCTTc > 2:1222875‑M2/65‑76 (MQ=255) agccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTGCCTTACCTTCCAg < 2:1319276‑M2/15‑1 (MQ=255) gCATGATCCTCTACATACAACCAGTCGCGGATCTGATCTCCTTTGCCATAAATAGGTAATGCCTTACCggtaatga > 2:326110‑M2/1‑68 (MQ=255) gCATGATCCTCTACATACAACCAGTCGCGGATCTGATCTCCTTTGCCATAAATAGGTAATGCCTTACCTTCCAGTg < 1:1516556/76‑1 (MQ=255) actggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTGCCTTACCTTCCAGTGCa > 1:139481‑M2/58‑76 (MQ=255) aTGATCCTCTACATACAACCAGTCGCGGATCTGATCTCCTTTGCCATAAATAGGTAATGCCTTACCggtaatgact < 1:1065045‑M2/76‑11 (MQ=255) ggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTGCCTTACCTTCCAGTGCATTa < 1:1545300‑M2/22‑1 (MQ=255) tCCTCTACATACAACCAGTCGCGGATCTGATCTCCTTTGCCATAAATAGGTAATGCCTTACCggtaatgactccaa > 1:1490114‑M2/1‑62 (MQ=255) gagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTGCCTTACCTTCCAGTGCATTaa < 2:1174837‑M2/23‑1 (MQ=255) gagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTGCCTTACCTTCCAGTGCATTaa > 2:1251306‑M2/54‑76 (MQ=255) gagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTGCCTTACCTTCCAGTGCATTaa < 2:1544381‑M2/23‑1 (MQ=255) ccTCTACATACAACCAGTCGCGGATCTGATCTCCTTTGCCATAAATAGGTAATGCCTTACCggtaatgactccaac < 1:662331‑M2/76‑16 (MQ=255) tctACATACAACCAGTCGCGGATCTGATCTCCTTTGCCATAAATAGGTAATGCCTTACCggtaatgactccaactt < 2:639006‑M2/76‑18 (MQ=255) tctACATACAACCAGTCGCGGATCTGATCTCCTTTGCCATAAATAGGTAATGCCTTACCggtaatgactccaactt > 1:471890‑M2/1‑59 (MQ=255) cacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTGCCTTACCTTCCAGTGCATTAAGaa < 1:204440‑M2/26‑1 (MQ=255) ctACATACAACCAGTCGCGGATCTGATCTCCTTTGCCATAAATAGGTAATGCCTTACCggtaatgactccaactta > 2:1378127‑M2/1‑58 (MQ=255) tacatacaACCAGTCGCGGATCTGATCTCCTTTGCCGTAAATAGGTAATGCCTTACCggtaatgactccaacttat > 2:790833‑M2/1‑57 (MQ=255) tacatacaACCAGTCGCGGATCTGATCTCCTTTGCCATAAATAGGTAATGCCTTACCggtaatgactccaacttat > 2:790842‑M2/1‑57 (MQ=255) tacatacaACCAGTCGCGGATCTGATCTCCTTTGCCATAAATAGGTAATGCCTTACCggtaatgactccaacttat < 2:934260‑M2/76‑20 (MQ=255) tacatacaACCAGTCGCGGATCTGATCTCCTTTGCCATAAATAGGTAATGCCTTACCggtaatgactccaacttat > 1:1155373‑M2/1‑57 (MQ=255) cctcaaaaacaccatcatacactaagtcagtaagttggcagcatcaccTGCCTTACCTTCCAGTGCATTAAGAATa < 1:498576‑M2/28‑1 (MQ=255) catacaACCAGTCGCGGATCTGATCTCCTTTGCCATAAATAGGTAATGCCTTACCggtaatgactccaacttattg > 2:1511836‑M2/1‑55 (MQ=255) caaaaacaccatcatacactaaatcagtaagttggcagcatcaccTGCCTTACCTTCCAGTGCATTAAGAATAaca > 2:600136‑M2/46‑75 (MQ=255) caaaaacaccatcatacactaaatcagtaagttggcagcatcaccTGCCTTACCTTCCAGTGCATTAAGAATAaca > 2:600121‑M2/46‑75 (MQ=255) caaaaacaccatcatacactaaatcagtaagttggcagcatcaccTGCCTTACCTTCCAGTGCATTAAGAATAAcc > 2:1146650‑M2/46‑76 (MQ=255) tacaACCAGTCGCGGATCTGATCTCCTTTGCCATAAATAGGTAATGCCTTACCggtaatgactccaacttattgat > 1:755576‑M2/1‑53 (MQ=255) aaaaacaccatcatacactaaatcagtaagttggcagcatcaccTGCCTTACCTTCCAGTGCATTAAGAATAACCa > 2:917547‑M2/45‑76 (MQ=255) aacaccatcatacactaaatcagtaagttggcagcatcaccTGCCTTACCTTCCAGTGCATTAAGAATAACCAGTg < 1:761354‑M2/35‑1 (MQ=255) acaccatcatacactaaatcagtaagttggcagcatcaccTGCCTTACCTTCCAGTGCATTAAGAATAACCAGTgg < 1:1114017‑M2/36‑1 (MQ=255) cAGTCGCGGATCTGATCTCCTTTGCCATAAATAGGTAATGCCTTACCTTCCAGTGCATTAAGAATAACCAGTGGaa < 2:1010844/76‑1 (MQ=255) gTCGCGGATCTGATCTCCTTTGCCATAAATAGGTAATGCCTTACCggtaatgactccaacttattgatagtgtttt > 1:585574‑M2/1‑45 (MQ=255) atcatacactaaatcagtaagttggcagcatcaccTGCCTTACCTTCCAGTGCATTAAGAATAACCAGTGGAATaa < 2:178736‑M2/41‑1 (MQ=255) atcatacactaaatcagtaagttggcagcatcaccTGCCTTACCTTCCAGTGCATTAAGAATAACCAGTGGAATaa > 1:436992‑M2/36‑76 (MQ=255) tcatacactaaatcagtaagttggcagcatcaccTGCCTTACCTTCCAGTGCATTAAGAATAACCAGTGGAATAAg < 1:1241858‑M2/42‑1 (MQ=255) tacactaaatcagtaagttggcagcatcaccTGCCTTACCTTCCAGTGCATTAAGAATAACCAGTGGAATAAGCtt < 1:1579026‑M2/45‑1 (MQ=255) tacactaaatcagtaagttggcagcatcaccTGCCTTACCTTCCAGTGCATTAAGAATAACCAGTGGAATAAGCtt > 1:1525864‑M2/32‑76 (MQ=255) ggATCTGATCTCCTTTGCCATAAATAGGTAATGCCTTACCggtaatgactccaacttattgatagtgttttatgtt > 2:542654‑M2/1‑40 (MQ=255) acactaaatcagtaagttggcagcatcaccTGCCTTACCTTCCAGTGCATTAAGAATAACCAGTGGAATAAGCttt > 2:619403‑M2/31‑76 (MQ=255) cactaaatcagtaagttggcagcatcaccTGCCTTACCTTCCAGTGCATTAAGAATAACCAGTGGAATAAGCtttt > 1:1261786‑M2/30‑76 (MQ=255) cactaaatcagtaagttggcagcatcaccTGCCTTACCTTCCAGTGCATTAAGAATAACCAGTGGAATAAGCtttt < 1:480985‑M2/47‑1 (MQ=255) cactaaatcagtaagttggcagcatcaccTGCCTTACCTTCCAGTGCATTAAGAATAACCAGTGGAATAAGCtttt < 1:1011712‑M2/47‑1 (MQ=255) cactaaatcagtaagttggcagcatcaccTGCCTTACCTTCCAGTGCATTAAGAATAACCAGTGGAATAAGCtttt > 1:1458091‑M2/30‑76 (MQ=255) tctgatctCCTTTGCCATAAATAGGTAATGCCTTACCggtaatgactccaacttattgatagtgttttatgttcag < 1:828198‑M2/76‑40 (MQ=255) actaaatcagtaagttggcagcatcaccTGCCTTACCTTCCAGTGCATTAAGAATAACCAGTGGAATAAGCTTTTc > 1:1398805‑M2/29‑76 (MQ=255) ctgatctCCTTTGCCATAAATAGGTAATGCCTTACCggtaatgactccaacttattgatagtgttttatgttcaga > 1:1428991‑M2/1‑36 (MQ=255) tgatctCCTTTGCCATAAATAGGTAATGCCTTACCggtaatgactccaacttattgatagtgttttatgttcagat < 1:608668‑M2/76‑42 (MQ=255) tgatctCCTTTGCCATAAATAGGTAATGCCTTACCggtaatgactccaacttattgatagtgttttatgttcagat < 1:583225‑M2/76‑42 (MQ=255) gatctCCTTTGCCATAAATAGGTAATGCCTTACCggtaatgactccaacttattgatagtgttttatgttcagata < 1:431621‑M2/76‑43 (MQ=255) gatctCCTTTGCCATAAATAGGTAATGCCTTACCTTCCAGTGCATTAAGAATAACCAGTGGAATAAGCTTTTCCgg > 2:1539077/1‑76 (MQ=255) atctCCTTTGCCATAAATAGGTAATGCCTTACCggtaatgactccaacttattgatagtgttttatgttcagataa > 1:292360‑M2/1‑33 (MQ=255) tctcCTTTGCCATAAATAGGTAATGCCTTACCggtaatgactccaacttattgatagtgttttatgttcagataat > 2:425645‑M2/1‑32 (MQ=255) tcagtaagttggcagcatcaccTGCCTTACCTTCCAGTGCATTAAGAATAACCAGTGGAATAAGCTTTTCCGGGaa < 2:928590‑M2/54‑1 (MQ=255) ctcCTTTGCCATAAATAGGTAATGCCTTACCggtaatgactccaacttattgatagtgttttatgttcagataatg > 1:1482194‑M2/1‑31 (MQ=255) tcCTTTGCCATAAATAGGTAATGCCTTACCggtaatgactccaacttagtgatagtgttttatgttcagataatgc > 2:1405361‑M2/1‑30 (MQ=255) aagttggcagcatcaccTGCCTTACCTTCCAGTGCATTAAGAATAACCAGTGGAATAAGCTTTTCCGGGAAATGAt > 2:288420‑M2/18‑76 (MQ=255) aagttggcagcatcaccTGCCTTACCTTCCAGTGCATTAAGAATAACCAGTGGAATAAGCTTTTCCGGGAAATGAt > 2:755735‑M2/18‑76 (MQ=255) tGCCATAAATAGGTAATGCCTTACCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgat < 1:1143352‑M2/76‑52 (MQ=255) agttggcagcatccccTGCCTTACCTTCCAGTGCATTAAGAATAACCAGTGGAATAAGCTTTTCCGGGAAATGATa < 1:403078‑M2/60‑1 (MQ=255) gttggcagcatcaccTGCCTTACCTTCCAGTGCATTAAGAATAACCAGTGGAATAAGCTTTTCCGGGAAATGATaa > 1:1111651‑M2/16‑76 (MQ=255) gttggcagcatcaccTGCCTTACCTTCCAGTGCATTAAGAATAACCAGTGGAATAAGCTTTTCCGGGAAATGATaa < 1:292734‑M2/61‑1 (MQ=255) ttggcagcatcaccTGCCTTACCTTCCAGTGCATTAAGAATAACCAGTGGAATAAGCTTTTCCGGGAAATGATAAg > 2:792923‑M2/15‑76 (MQ=255) tggcagcatcaccTGCCTTACCTTCCAGTGCATTAAGAATAACCAGTGGAATAAGCTTTTCCGGGaa < 1:1010244‑M2/54‑1 (MQ=255) tggcagcatcaccTGCCTTACCTTCCAGTGCATTAAGAATAACCAGTGGAATAAGCTTTTCCGGGaa > 2:1010244‑M2/14‑67 (MQ=255) tAAATAGGTAATGCCTTACCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactt > 1:1003526‑M2/1‑20 (MQ=255) aaaTAGGTAATGCCTTACCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt < 2:112142‑M2/76‑58 (MQ=255) aaaTAGGTAATGCCTTACCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt > 2:1328387‑M2/1‑19 (MQ=255) agcatcaccTGCCTTACCTTCCAGTGCATTAAGAATAACCAGTGGAATAAGCTTTTCCGGGAAATGATAAGGACCa > 2:838920‑M2/10‑76 (MQ=255) aTAGGTAATGCCTTACCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgt > 1:832157‑M2/1‑17 (MQ=255) tAGGTAATGCCTTACCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtc > 1:488280‑M2/1‑16 (MQ=255) catcaccTGCCTTACCTTCCAGTGCATTAAGAATAACCAGTGGAATAAGCTTTTCCGGGAAATGATAAGGACCATa < 1:500372‑M2/69‑1 (MQ=255) atcaccTGCCTTACCTTCCAGTGCATTAAGAATAACCAGTGGAATAAGCTTTTCCGGGAAATGATAAGGACcatcg > 1:472737‑M2/7‑74 (MQ=255) atcaccTGCCTTACCTTCCAGTGCATTAAGAATAACCAGTGGAATAAGCTTTTCCGGGAAATGATAAGGACCATAg < 1:926430‑M2/70‑1 (MQ=255) atcaccTGCCTTACCTTCCAGTGCATTAAGAATAACCAGTGGAATAAGCTTTTCCGGGAAATGATAAGGACCATAg > 1:472724‑M2/7‑76 (MQ=255) caccTGCCTTACCTTCCAGTGCATTAAGAATAACCAGTGGAATAAGCTTTTCCGGGAAATGATAAGGACCATagta < 1:1336214‑M2/72‑2 (MQ=255) caccTGCCTTACCTTCCAGTGCATTAAGAATAACCAGTGGAATAAGCTTTTCCGGGAAATGATAAGGACCATAgtt > 2:749531‑M2/5‑76 (MQ=255) caccTGCCTTACCTTCCAGTGCATTAAGAATAACCAGTGGAATAAGCTTTTCCGGGAAATGATAAGGACCATAgtt < 1:1336192‑M2/72‑1 (MQ=255) tAATGCCTTACCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgc < 1:1323557‑M2/76‑65 (MQ=255) accTGCCTTACCTTCCAGTGCATTAAGAATAACCAGTGGAATAAGCTTTTCCGGGAAATGATAAGGACCATAgttg > 2:490936‑M2/4‑76 (MQ=255) | GGTATATAACGCTCGAGCATGATCCTCTACATACAACCAGTCGCGGATCTGATCTCCTTTGCCATAAATAGGTAATGCCTTACCTTCCAGTGCATTAAGAATAACCAGTGGAATAAGCTTTTCCGGGAAATGATAAGGACCATAGTTGT > REL606/2045558‑2045706 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |