| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 2,045,633 | IS1 (–) +9 bp | coding (652‑660/1086 nt) | rfbB ← | dTDP‑glucose 4,6 dehydratase, NAD(P)‑binding |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 1974039 | NA (NA) | 54 (1.090) | 38/150 | 0.3 | 88.8% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | REL606 | = 2045641 | 6 (0.140) | coding (652/1086 nt) | rfbB | dTDP‑glucose 4,6 dehydratase, NAD(P)‑binding | |||||
| * | ? | REL606 | = 2035093 | NA (NA) | 77 (1.560) | 50/150 | 0.0 | 91.8% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | REL606 | 2045633 = | 6 (0.140) | coding (660/1086 nt) | rfbB | dTDP‑glucose 4,6 dehydratase, NAD(P)‑binding | |||||
CGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCGACTGGTAACCATCCGATTGAAACGTTGCTGCCGTTGTATCATCTCCATGCTGCAGGTTTCGAATTCGAAG > REL606/1973966‑1974113 | cGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCt > 1:336583/1‑76 (MQ=31) gTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCg > 2:870447/1‑76 (MQ=34) ggAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCGAc > 2:1417109/1‑76 (MQ=38) cTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCGACTGGt > 1:378803/1‑76 (MQ=255) gCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCGACTGGTaa < 1:567485/76‑1 (MQ=255) cATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATACGTTGGAGTCATTACCCTCGACTGGTAAc > 2:1470563/1‑76 (MQ=255) aTGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCGACTGGTAAcc > 2:1487710/1‑76 (MQ=255) aTGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCGACTGGTAAcc < 1:633960/76‑1 (MQ=255) aTGACAAAGTCATCGGGCATTATCAGAACATAAAACACTATCAATAAGTTGGAGACATTACCCTCGACTGGCAAcc > 2:496361/1‑76 (MQ=14) tGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCGACTGGTAACCa > 2:834168/1‑76 (MQ=255) aCAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCGACTGGTAACCATc < 1:221076/76‑1 (MQ=255) aaaGTCATCGGGCATTATCTGAACATAAAACGCTATCAATAAGTTGGAGTCATTACCCTCGACTGGTAACCATCCg < 1:487021/76‑1 (MQ=255) aaaGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCGACTGGTAACCATCCg < 1:1400993/76‑1 (MQ=255) aaaGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCGACTGGTAACCATCCg > 2:92735/1‑76 (MQ=255) aaGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCGACTGGTAACCATCCGa > 1:969482/1‑76 (MQ=255) aaGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCGACTGGTAACCATCCGa < 1:1285524/76‑1 (MQ=255) aGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCGACTGGTAACCATCCGAt < 2:915053/76‑1 (MQ=255) tCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCGACTGGTAACCATCCGATTg > 2:297275/1‑76 (MQ=255) cATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCGACTGGTAACCATCCGATTGa < 2:1180466/76‑1 (MQ=255) tCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCGACTGGTAACCATCCGATTGaaa < 2:1422254/76‑1 (MQ=255) tCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCGACTGGTAACCATCCGATTGaaa < 2:1235245/76‑1 (MQ=255) tCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCGACTGGTAACCATCCGATTGaaa < 2:970683/76‑1 (MQ=255) cGGGCATTATCTGAACATAAAACACTATCAATCAGTTGGAGTCATTACCCTCGACTGGTAACCATCCGATTGAAAc > 2:676443/1‑76 (MQ=255) gCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCGACTGGTAACCATCCGATTGAAACGtt > 1:1013847/1‑76 (MQ=255) gCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCGACTGGTAACCATCCGATTGAAACGtt < 1:446803/76‑1 (MQ=255) cATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCGACTGGTAACCATCCGATTGAAACGTtg > 1:783152/1‑76 (MQ=255) aTTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCGACTGGTAACCATCCGATTGAAACGTtgc > 1:798035/1‑76 (MQ=255) ttATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCGACTGGTAACCATCCGATTGAAACGTtgct > 2:420736/1‑76 (MQ=255) ttATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCGACTGGTAACCATCCGATTGAAACGTtgct > 1:560729/1‑76 (MQ=255) tATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCGACTGGTAACCATCCGATTGAAACGTtgctg < 2:1338025/76‑1 (MQ=255) ggAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCGACTGGTAACCATCCGATTGAAACGTTGCTGCCGt > 1:645137/2‑76 (MQ=255) aaCATAAAACACTATCAATAAGTTGGAGTCATTACCCTCGACTGGTAACCATCCGATTGAAACGTTGCTGCCGTTg < 2:1363673/76‑1 (MQ=255) aCATAAAACACTATCAATAAGTTGGAGTCATTACCCTCGACTGGTAACCATCCGATTGAAACGTTGCTGCCGTTGt < 1:317521/76‑1 (MQ=255) aaaaaCACTATCAATAAGTGGGAGTCATTCCCCTCGACTGGTAACCATCCGATTGAAACGTTGCTGCCGTTGTatc < 1:933771/75‑1 (MQ=255) aaaaCACTATCAATAAGTTGGAGTCATTACCCTCGACTGGTAACCATCCGATTGAAACGTTGCTGCCGTTGTatca < 1:46829/76‑1 (MQ=255) aaaaCACTATCAATAAGTTGGAGTCATTACCCTCGACTGGTAACCATCCGATTGAAACGTTGCTGCCGTTGTatca > 2:340666/1‑76 (MQ=255) aaaaCACTATCAATAAGTTGGAGTCATTACCCTCGACTGGTAACCATCCGATTGAAACGTTGCTGCCGTTGTatca > 2:616503/1‑76 (MQ=255) aaaaCACTATCAATAAGTTGGAGTCATTACCCTCGACTGGTAACCATCCGATTGAAACGTTGCTGCCGTTGTatca < 1:124463/76‑1 (MQ=255) aaaCACTATCAATAAGTTGGAGTCATTACCCTCGACTGGTAACCATCCGATTGAAACGTTGCTGCCGTTGTatcat < 1:134663/76‑1 (MQ=255) acacTATCAATAAGTTGGAGTCATTACCCTCGACTGGTAACCATCCGATTGAAACGTTGCTGCCGTTGTATCAtct < 2:539109/76‑1 (MQ=255) cacTATCAATAAGTTGGAGTCATTACCCTCGACTGGTAACCATCCGATTGAAACGTTGCTGCCGTTGTATCAtctc > 1:1512850/1‑76 (MQ=255) acTATCAATAAGTTGGAGTCATTACCCTCGACTGGTAACCATCCGATTGAAACGTTGCTGCCGTTGTATCATCTcc > 2:809957/1‑76 (MQ=255) tATCAATAAGTTGGAGTCATTCCCCTCGACTGGTAACCATCCGATTGAAACGTTGCTGCCGTTGTATCATCTCCAt < 2:340226/76‑1 (MQ=255) aTAAGTTGGAGTCATTACCCTCGACTGGTAACCATCCGATTGAAACGTTGCTGCCGTTGTATCATCTCCAtgctgc > 2:722220/1‑76 (MQ=255) tAAGTTGGAGTCATTACCCTCGACTGGTAACCATCCGATTGAAACGTTGCTGCCGTTGTATCATCTCCATGCTGCa > 2:175091/1‑76 (MQ=255) aGTGGGAGTCATTACCCTCGACTGGTAACCATCCGATTGAAACGTTGCTGCCGTTGTATCATCTCCATGCTGCAgg < 2:1312242/76‑1 (MQ=255) gTTGGAGTCATTACCCTCGACTGGTAACCATCCGATTGAAACGTTGCTGCCGTTGTATCATCTCCATGCTGCAGGt > 1:1111487/1‑76 (MQ=255) tGGAGTCATTACCCTCGACTGGTAACCATCCGATTGAAACGTTGCTGCCGTTGTATCATCTCCATGCTGCAGGttt > 2:1522855/1‑76 (MQ=255) tGGAGTCATTACCCTCGACTGGTAACCATCCGATTGAAACGTTGCTGCCGTTGTATCATCTCCATGCTGCAGGttt < 1:515042/76‑1 (MQ=255) ggAGTCATTACCCTCGACTGGTAACCATCCGATTGAAACGTTGCTGCCGTTGTATCATCTCCATGCTGCAGGTttc < 2:183281/76‑1 (MQ=255) aGTCATTACCCTCGACTGGTAACCATCCGATTGAAACGTTGCTGCCGTTGTATCATCTCCATGCTGCAGGTttcga > 1:933775/1‑76 (MQ=255) aGTCATTACCCTCGACTGGTAACCATCCGATTGAAACGTTGCTGCCGTTGTATCATCTCCATGCTGCAGGTttcga < 1:773606/76‑1 (MQ=255) cATTACCCTCGACTGGTAACCATCCGATTGAAACGTTGCTGCCGTTGTATCATCTCCATGCTGCAGGTttcgaatt > 2:1462326/1‑76 (MQ=255) cATTACCCTCGACTGGTAACCATCCGATTGAAACGTTGCTGCCGTTGTATCATCTCCATGCTGCAGGTttcgaatt > 2:1398024/1‑76 (MQ=255) cATTACCCTCGACTGGTAACCATCCGATTGAAACGTTGCTGCCGTTGTATCATCTCCATGCTGCAGGTttcgaatt < 1:79498/76‑1 (MQ=255) aTTCCCCTCGACTGGTAACCATCCGATTGAAACGTTGCTGCCGTTGTATCATCTCCATGCTGCAGGTttcgaattc < 1:662110/76‑1 (MQ=255) tACCCTCGACTGGTAACCATCCGATTGAAACGTTGCTGCCGTTGTATCATCTCCATGCTGCAGGTttcgaattcga > 1:924727/1‑76 (MQ=255) aCCCTCGACTGGTAACCATCCGATTGAAACGTTGCTGCCGTTGTATCATCTCCATGCTGCAGGTttcgaattcgaa > 2:410937/1‑76 (MQ=255) aCCCTCGACTGGTAACCATCCGATTGAAACGTTGCTGCCGTTGTATCATCTCCATGCTGCAGGTttcgaattcgaa > 2:1418942/1‑76 (MQ=255) aCCCTCGACTGGTAACCATCCGATTGAAACGTTGCTGCCGTTGTATCATCTCCATGCTGCAGGTttcgaattcgaa > 1:131466/1‑76 (MQ=255) cccTCGACTGGTAACCATCCGATTGAAACGTTGCTGCCGTTGTATCATCTCCATGCTGCAGGTTTCGAATTCGAAg > 2:50648/1‑76 (MQ=255) cccTCGACTGGTAACCATCCGATTGAAACGTTGCTGCCGTTGTATCATCTCCATGCTGCAGGTTTCGAATTCGAAg < 2:598053/76‑1 (MQ=255) | CGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCGACTGGTAACCATCCGATTGAAACGTTGCTGCCGTTGTATCATCTCCATGCTGCAGGTTTCGAATTCGAAG > REL606/1973966‑1974113 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |