| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 2,045,633 | IS1 (–) +9 bp | coding (652‑660/1086 nt) | rfbB ← | dTDP‑glucose 4,6 dehydratase, NAD(P)‑binding |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 1974039 | NA (NA) | 54 (1.090) | 38/150 | 0.3 | 88.8% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | REL606 | = 2045641 | 6 (0.140) | coding (652/1086 nt) | rfbB | dTDP‑glucose 4,6 dehydratase, NAD(P)‑binding | |||||
| * | ? | REL606 | = 2035093 | NA (NA) | 77 (1.560) | 50/150 | 0.0 | 91.8% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | REL606 | 2045633 = | 6 (0.140) | coding (660/1086 nt) | rfbB | dTDP‑glucose 4,6 dehydratase, NAD(P)‑binding | |||||
TAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATATCCTTGTGATAATATTTATTATAAAGTCTTGATATGATATATAATTTGCACGATAAAAATGATACTGA > REL606/2035023‑2035167 | tAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAat < 2:291395/76‑1 (MQ=32) aGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAata < 1:1457213/76‑1 (MQ=34) gAAACAGAAGCCACTGGAGCCCCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCCCCCAAatat < 1:650446/76‑1 (MQ=255) gAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAatat < 1:1158284/76‑1 (MQ=35) aaCAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATATcc > 2:871729/1‑76 (MQ=39) aaCAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATATcc > 1:1514104/1‑76 (MQ=39) cAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATATCCtt > 2:1568598/1‑76 (MQ=255) cAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATATCCtg > 2:986589/1‑75 (MQ=255) aGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATATCCTtg > 2:1225763/1‑76 (MQ=255) aaGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATATCCTtgtg > 2:989671/1‑76 (MQ=255) aaGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATATCCTtgtg < 1:1205780/76‑1 (MQ=255) ccACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATATCCTTGTGata < 1:353663/76‑1 (MQ=255) cACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATATCCTTGTGataa > 1:802514/1‑76 (MQ=255) cTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATATCCTTGTGataata < 2:473864/76‑1 (MQ=255) cTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATATCCTTGTGataata < 2:1479818/76‑1 (MQ=255) tGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATATCCTTGTGATAatat < 2:234550/76‑1 (MQ=255) aCCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATATCCTTGTGATAATATttatta > 2:11178/1‑76 (MQ=255) ccTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATATCCTTGTGATAATATTtattat > 2:1466886/1‑76 (MQ=255) cAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATATCCTTGTGATAATATTTATTATaaa > 1:220986/1‑76 (MQ=255) cAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATATCCTTGTGATAATATTTATTATaaa < 2:1243232/76‑1 (MQ=255) acacCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATATCCTTGTGATAATATTTATTATAAAGTCtt < 1:98472/76‑1 (MQ=255) catcatACACTAAATCAGTAAGTTGGCAGCATCACCCAAATATCCTTGTGATAATATTTATTATAAAGTCTtgata < 2:1218624/76‑1 (MQ=255) atcatACACTAAATCAGTAAGTTGGCAGCATCACCCAAATATCCTTGTGATAATATTTATTATAAAGTCTtgatat > 1:1555197/1‑76 (MQ=255) atcatACAATAAATCAGTAAGTTGGCAGCATCACCCAAATATCCTTGTGATAATATTTATTATAAAGTCTtgatat > 2:1476952/1‑76 (MQ=255) catACACTAAATCAGTAAGTTGGCAGCATCACCCAAATATCCTTGTGATAATATTTATTATAAAGTCTtgatatga < 1:1549759/76‑1 (MQ=255) atACACTAAATCAGTAAGTTGGCAGCATCACCCAAATATCCTTGTGATAATATTTATTATAAAGTCTtgatatgat > 2:136302/1‑76 (MQ=255) atACACTAAATCAGTAAGTTGGCAGCATCACCCAAATATCCTTGTGATAATATTTATTATAAAGTCTtgatatgat < 1:457734/76‑1 (MQ=255) acTAAATCAGTAAGTTGGCAGCATCACCCAAATATCCTTGTGATAATATTTATTATAAAGTCTTGATATGatatat < 1:1180044/76‑1 (MQ=255) cTAAATCAGTAAGTTGGCAGCATCACCCAAATATCCTTGTGATAATATTTATTATAAAGTCTTGATATGAtatata < 1:7942/76‑1 (MQ=255) tAAATCAGTAAGTTGGCAGCATCACCCAAATATCCTTGTGATAATATTTATTATAAAGTCTTGATATGATATATaa < 1:625002/76‑1 (MQ=255) aaaTCAGTAAGTTGGCAGCATCACCCAAATATCCTTGTGATAATATTTATTATAAAGTCTTGATATGATATATAAt < 2:902008/76‑1 (MQ=255) tCAGTAAGTTGGCAGCATCACCCAAATATCCTTGTGATAATATTTATTATAAAGTCTTGATATGATATATAATTTg < 2:1014943/76‑1 (MQ=255) cAGTAAGTTGGCAGCATCACCCAAATATCCTTGTGATAATATTTATTATAAAGTCTTGATATGATATATAATTTGc > 2:1078036/1‑76 (MQ=255) cAGTAAGTTGGCAGCATCACCCAAATATCCTTGTGATAATATTTATTATAAAGTCTTGATATGATATATAATTTGc > 2:1555300/1‑76 (MQ=255) aGTAAGTTGGCAGCATCACCCAAATATCCTTGTGATAATATTTATTATAAAGTCTTGATATGATATATAATTTGCa < 2:938999/76‑1 (MQ=255) tAAGTTGGCAGCATCACCCAAATATCCTTGTGATAATATTTATTATAAAGTCTTGATATGATATATAATTTGCACg > 2:1485026/1‑76 (MQ=255) aaGTTGGCAGCATCACCCAAATATCCTTGTGATAATATTTATTATAAAGTCTTGATATGATATATAATTTGCACGa > 2:1435390/1‑76 (MQ=255) aGTTGGGAGCATCACCCAAATATCCTTGTGATAATATTTATTATAAAGTCTTGATATGATATATAATTTGCACGAt < 2:484938/76‑1 (MQ=255) aGTTGGCAGCATCACCCAAATATCCTTGTGATAATATTTATTATAAAGTCTTGATATGATATATAACTTGCACGAt > 1:1277210/1‑76 (MQ=255) ttGGCAGCATCACCCAAATATCCTTGTGATAATATTTATTATAAAGTCTTGATATGATATATAATTTGCACGATaa > 1:1541346/1‑76 (MQ=255) ttGGCAGCATCACCCAAATATCCTTGTGATAATATTTATTATAAAGTCTTGATATGATATATAATTTGCACGATaa > 2:645642/1‑76 (MQ=255) gcagcaTCACCCAAATATCCTTGTGATAATATTTATTATAAAGTCTTGATATGATATATAATTTGCACGATaaaaa < 1:737128/76‑1 (MQ=255) cagcaTCACCCAAATATCCTTGTGATAATATTTATTATAAAGTCTTGATATGATATATAATTTGCACGATAAAAAt > 1:1013063/1‑76 (MQ=255) cagcaTCACCCAAATATCCTTGTGATAATATTTATTATAAAGTCTTGATATGATATATAATTTGCACGATAAAAAt > 1:614023/1‑76 (MQ=255) gcaTCACCCAAATATCCTTGTGATAATATTTATTATAAAGTCTTGATATGATATATAATTTGCACGATAAAAATGa < 1:1290189/76‑1 (MQ=255) tCACCCAAATATCCTTGTGATAATATTTATTATAAAGTCTTGATATGATATATAATTTGCACGATAAAAATGATAc > 2:343644/1‑76 (MQ=255) tCACCCAAATATCCTTGTGATAATATTTATTATAAAGTCTTGATATGATATATAATTTGCACGATAAAAATGATAc > 2:1573263/1‑76 (MQ=255) tCACCCAAATATCCTTGTGATAATATTTATTATAAAGTCTTGATATGATATATAATTTGCACGATAAAAATGATAc < 1:989671/76‑1 (MQ=255) tCACCCAAATATCCTTGTGATAATATTTATTATAAAGTCTTGATATGATATATAATTTGCACGATAAAAATGATAc < 1:1568093/76‑1 (MQ=255) cccAAATATCCTTGTGATAATATTTATTATAAAGTCTTGATATGATATATAATTTGCACGATAAAAATGATACTGa > 1:83669/1‑76 (MQ=255) cccAAATATCCTTGTGATAATATTTATTATAAAGTCTTGATATGATATATAATTTGCACGATAAAAATGATACTGa > 1:414121/1‑76 (MQ=255) | TAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATATCCTTGTGATAATATTTATTATAAAGTCTTGATATGATATATAATTTGCACGATAAAAATGATACTGA > REL606/2035023‑2035167 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |