mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 55 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_007779 | 4629467 = | 208 (1.080) | 4 (0.020) | 3/412 | NT | 2.2% | coding (3/645 nt) | Y75_RS25110 | YtjB family periplasmic protein |
| ? | NC_007779 | 4629612 = | 162 (0.870) | coding (38/969 nt) | serB | phosphoserine phosphatase | |||||
| * | ? | NC_007779 | 4597557 = | 232 (1.200) | 3 (0.020) | 3/412 | NT | 1.6% | coding (1221/1656 nt) | tsr | methyl‑accepting chemotaxis protein |
| ? | NC_007779 | 4597841 = | 137 (0.730) | coding (1505/1656 nt) | tsr | methyl‑accepting chemotaxis protein | |||||
| * | ? | NC_007779 | 4552337 = | 98 (0.510) | 3 (0.020) | 3/404 | NT | 2.2% | coding (2562/2637 nt) | fimD | fimbrial biogenesis usher protein FimD |
| ? | NC_007779 | 4552893 = | 178 (0.970) | coding (472/531 nt) | fimF | type 1 fimbria minor subunit FimF | |||||
| * | ? | NC_007779 | = 4315466 | 219 (1.140) | 4 (0.020) | 3/414 | NT | 1.8% | coding (193/1533 nt) | Y75_RS21330 | D‑allose ABC transporter ATP‑binding protein AlsA |
| ? | NC_007779 | = 4315659 | 227 (1.210) | intergenic (‑1/+126) | Y75_RS21330/Y75_RS21335 | D‑allose ABC transporter ATP‑binding protein AlsA/D‑allose transporter substrate‑binding protein | |||||
| * | ? | NC_007779 | 4266228 = | 158 (0.820) | 3 (0.020) | 3/418 | NT | 1.7% | coding (970/1038 nt) | dusA | tRNA dihydrouridine(20/20a) synthase DusA |
| ? | NC_007779 | 4266350 = | 201 (1.060) | intergenic (+54/‑80) | dusA/pspG | tRNA dihydrouridine(20/20a) synthase DusA/envelope stress response protein PspG | |||||
| * | ? | NC_007779 | = 4251423 | 174 (0.900) | 4 (0.020) | 3/408 | NT | 2.7% | coding (1050/1116 nt) | malK | maltose/maltodextrin ABC transporter ATP‑binding protein MalK |
| ? | NC_007779 | = 4251585 | 121 (0.660) | coding (25/1341 nt) | lamB | maltoporin LamB | |||||
| * | ? | NC_007779 | 3970002 = | 184 (0.950) | 4 (0.020) | 4/414 | NT | 2.3% | coding (822/1650 nt) | treF | alpha,alpha‑trehalase TreF |
| ? | NC_007779 | 3970183 = | 168 (0.900) | coding (641/1650 nt) | treF | alpha,alpha‑trehalase TreF | |||||
| * | ? | NC_007779 | 3941357 = | 350 (1.820) | 7 (0.040) | 7/408 | NT | 1.9% | coding (845/1680 nt) | bcsG | cellulose biosynthesis protein BcsG |
| ? | NC_007779 | 3941449 = | 406 (2.200) | coding (753/1680 nt) | bcsG | cellulose biosynthesis protein BcsG | |||||
| * | ? | NC_007779 | 3915539 = | 482 (2.500) | 9 (0.050) | 6/402 | NT | 2.1% | coding (443/912 nt) | glyQ | glycine‑‑tRNA ligase subunit alpha |
| ? | NC_007779 | 3915873 = | 371 (2.040) | coding (777/912 nt) | glyQ | glycine‑‑tRNA ligase subunit alpha | |||||
| * | ? | NC_007779 | 3898215 = | 432 (2.240) | 4 (0.020) | 4/408 | NT | 0.92% | coding (333/849 nt) | yiaJ | IclR family transcriptional regulator YiaJ |
| ? | NC_007779 | 3898477 = | 445 (2.410) | coding (595/849 nt) | yiaJ | IclR family transcriptional regulator YiaJ | |||||