mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4388347 = | 146 (1.090) | 4 (0.030) | 4/480 | NT | 2.7% | coding (1024/3324 nt) | mscM | mechanosensitive channel protein, miniconductance |
| ? | NC_000913 | 4388514 = | 142 (1.070) | coding (857/3324 nt) | mscM | mechanosensitive channel protein, miniconductance | |||||
| * | ? | NC_000913 | 3864771 = | 193 (1.440) | 3 (0.020) | 3/474 | NT | 1.5% | coding (1503/1662 nt) | yidE | putative transporter |
| ? | NC_000913 | 3865103 = | 203 (1.550) | coding (1171/1662 nt) | yidE | putative transporter | |||||
| * | ? | NC_000913 | 2882234 = | 128 (0.950) | 4 (0.030) | 4/450 | NT | 3.3% | coding (404/483 nt) | casB | CRISP RNA (crRNA) containing Cascade antiviral complex protein |
| ? | NC_000913 | 2882252 = | 117 (0.940) | coding (386/483 nt) | casB | CRISP RNA (crRNA) containing Cascade antiviral complex protein | |||||
| * | ? | NC_000913 | = 2878034 | 121 (0.900) | 4 (0.030) | 4/428 | NT | 3.6% | intergenic (+416/+535) | iap/ygbF | aminopeptidase in alkaline phosphatase isozyme conversion/CRISPR adaptation ssRNA endonuclease |
| ? | NC_000913 | 2878281 = | 109 (0.920) | intergenic (+663/+288) | iap/ygbF | aminopeptidase in alkaline phosphatase isozyme conversion/CRISPR adaptation ssRNA endonuclease | |||||
| * | ? | NC_000913 | = 2671662 | 123 (0.920) | 6 (0.050) | 6/474 | NT | 4.7% | coding (438/813 nt) | hcaB | 2,3‑dihydroxy‑2,3‑dihydrophenylpropionate dehydrogenase |
| ? | NC_000913 | = 2671671 | 126 (0.960) | coding (447/813 nt) | hcaB | 2,3‑dihydroxy‑2,3‑dihydrophenylpropionate dehydrogenase | |||||
| * | ? | NC_000913 | = 2643100 | 122 (0.910) | 4 (0.030) | 4/458 | NT | 3.1% | intergenic (‑256/+29) | rodZ/rlmN | MreB assembly cytoskeletal protein/dual specificity 23S rRNA m(2)A2503, tRNA m(2)A37 methyltransferase, SAM‑dependent |
| ? | NC_000913 | = 2643110 | 136 (1.070) | intergenic (‑266/+19) | rodZ/rlmN | MreB assembly cytoskeletal protein/dual specificity 23S rRNA m(2)A2503, tRNA m(2)A37 methyltransferase, SAM‑dependent | |||||
| * | ? | NC_000913 | = 1828681 | 89 (0.660) | 4 (0.030) | 4/468 | NT | 4.5% | coding (1054/1479 nt) | astD | succinylglutamic semialdehyde dehydrogenase |
| ? | NC_000913 | = 1828695 | 86 (0.660) | coding (1040/1479 nt) | astD | succinylglutamic semialdehyde dehydrogenase | |||||
| * | ? | NC_000913 | = 1817436 | 107 (0.800) | 4 (0.030) | 4/482 | NT | 3.7% | coding (1065/1353 nt) | chbF | phospho‑chitobiase; general 6‑phospho‑beta‑glucosidase activity |
| ? | NC_000913 | 1817440 = | 104 (0.780) | coding (1061/1353 nt) | chbF | phospho‑chitobiase; general 6‑phospho‑beta‑glucosidase activity | |||||
| * | ? | NC_000913 | 1060593 = | 105 (0.780) | 3 (0.020) | 3/476 | NT | 2.8% | coding (1338/2547 nt) | torA | trimethylamine N‑oxide (TMAO) reductase I, catalytic subunit |
| ? | NC_000913 | = 1060589 | 102 (0.780) | coding (1334/2547 nt) | torA | trimethylamine N‑oxide (TMAO) reductase I, catalytic subunit | |||||
| * | ? | NC_000913 | = 105258 | 120 (0.890) | 3 (0.020) | 3/470 | NT | 2.6% | intergenic (+14/‑47) | ftsA/ftsZ | ATP‑binding cell division FtsK recruitment protein/GTP‑binding tubulin‑like cell division protein |
| ? | NC_000913 | = 105268 | 112 (0.860) | intergenic (+24/‑37) | ftsA/ftsZ | ATP‑binding cell division FtsK recruitment protein/GTP‑binding tubulin‑like cell division protein | |||||