| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 759,508 | (TGAACGTGCTGG)2→1 | coding (803‑814/2802 nt) | sucA → | 2‑oxoglutarate decarboxylase, thiamine triphosphate‑binding |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 759508 | 759519 | 12 | 24 [0] | [0] 24 | sucA | 2‑oxoglutarate decarboxylase, thiamine triphosphate‑binding |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 759507 | 0 (0.000) | 23 (0.660) | 18/260 | 1.0 | 100% | coding (802/2802 nt) | sucA | 2‑oxoglutarate decarboxylase, thiamine triphosphate‑binding |
| ? | NC_000913 | 759520 = | 0 (0.000) | coding (815/2802 nt) | sucA | 2‑oxoglutarate decarboxylase, thiamine triphosphate‑binding | |||||
TTCCCTGGCGCAAAACGCTTCTCGCTGGAAGGCGGTGACGCGTTAATCCCGATGCTTAAAGAGATGATCCGCCACGCTGGCAACAGCGGCACCCGCGAAGTGGTTCTCGGGATGGCGCACCGTGGTCGTCTGAACGTGCTGGTGAACGTGCTGGGTAAAAAACCGCAAGACTTGTTCGACGAGTTCGCCGGTAAACATAAAGAACACCTCGGCACGGGTGACGTGAAATACCACATGGGCTTCTCGTCTGACTTCCAGACCGATGGCGGCCTGGTGCACCTG > NC_000913/759366‑759647 | ttCCCTGGCGCAAAACGCTTCTCGCTGGAAGGCGGTGACGCGTTAATCCCGATGCTTAAAGAGATGATCCGCCACGCTGGCAACAGCGGCACCCGCGAAGTGGTGCTCGGGATGGCGCACCGTGGTCGTCTGAACGTGCTGGg > 1:473774‑M1/1‑142 (MQ=255) tGGAAGGCGGTCACGCGTCAATCCCGATGCTTAAAGAGATGATCCGCCACGCTGGCAACAGCGGCACCCGCGAAGTGGTTCTCGGGATGGCGCACCGTGGTCGTCTGAACGTGCTGGgtaaaaaaccgcaagacttgttcgac < 1:246940‑M1/143‑27 (MQ=255) gCGGTGACGCGTTAATCCCGATGCTTAAAGAGATGATCCGGCACGCTGGCAACAGCGGCACGCGCGTAGTGGTTGTGGGGATGGCGCGCCGTGGGCGTCGGAACGGGCTGGgtaaaaaaccgcaagacttgttcgacgagttc > 2:528390‑M1/1‑111 (MQ=255) gCGGTGACGCGTTAATCCCGATGCTTAAAGAGATGATCCGCCACGCTGGCAACAGCGGCCCCCGCGCAGTGGTTCTCGGGATGGCGCACCGTGGTCGTCTGAACGTGCTGGgtagaaaaccgcacgacgtgttcgacgagttc > 2:35493‑M1/1‑111 (MQ=255) gCGGTGACGCGTTAATCCCGATGCTTAAAGAGATGATCCGCCACGCTGGCAACAGCGGCACCCGCGAAGTGGTTCTCGGGATGGCGCACCGTGGTCGTCTGCACGTGCTGGgtaaaaaaccgcaagacttgttcgacgagttc > 1:549145‑M1/1‑111 (MQ=255) tGACGCGTTAATCCCGATGCTTAAAGAGATGATCCGCCACGCTGGCAACAGCGGCACCCGCGAAGTGGTTCTCGGGATGGCGCACCGTGGTCGTCTGAACGTGCTGGgtaaaaaaccgcaagacttgttcgacgagttcgccg < 1:27689‑M1/143‑37 (MQ=255) gcgTTAATCCCGATGCTTAAAGAGATGATCCGCCACGCTGGCAACAGCGGCACCCGCGAAGTGGTTCTCGGGATGGCGCACCGTGGTCGTCTGAACGTGCTGGgtaaaaaaccgcaagacttgttcgacgagttcgccggtaa > 1:208913‑M1/1‑103 (MQ=255) gccgcatgcttAAAGAGAGGATCCGCCACTCTGGCAACAGCGGCACCCGCGAAGTGGTTCTCGGGATGGCGCACCGTGGTCGTCTGAACGTGCTGGgtaaaataccgcaagactggttcgacgagttcgccggtaaacataaa < 1:494144‑M1/138‑48 (MQ=255) ccGATGCTTAAAGAGATGATCCGCCACGCTGGCAACAGCGGCACCCGCGAAGTGGTTCTCGGGATGGCGCACCGTGGTCGTCTGAACGTGCTGGgtaaaaaaccgcaagacttgttcgacgagttcgccggtaaccctaaaga > 1:253066‑M1/1‑94 (MQ=255) cGATGCTTAAAGAGATGATCCGCCACGCTGGCAACAGCGGCACCCGCGAAGTGGTTCTCGGGATGGCGCACCGTGGTCGTCTGAACGTGCTGGgtaaaaaaccgcaagacttgttcgacgagttcgccggtaaacataaagaa < 1:605379‑M1/143‑51 (MQ=255) aaaGAGATGATCCGCCACGCTGGCAACAGCGGCACCCGCGAAGTGGTTCTCGGGATGGCGCACCGTGGTCGTCTGAACGTGCTGGgtaaaaaaccgcaaggcttgttcgacgagttcgccggtaaacataaagaacacctcgg > 1:318612‑M1/1‑85 (MQ=255) gatCCGCCACGCTGGCAACAGCGGCACCCGCGAAGTGGTTCTCGGGATGGCGCACCGTGGTCGTCTGAACGGGCTGGggaacaaaccgcaagacttgttcgacgagtgcgccgctaaacataaaagacaccccggcacgggtg > 2:586265‑M1/1‑77 (MQ=255) ctctagcaacaGCCGGACCCGCGAATTGGGTCTCGGCATGGCGCACCGTGCTCGTCCGAACGTGCTGTgtaaaaaaccgcaggacttgttcgacgagttcgccggtaaacataaagaccacctcggcacgggtgacgtgaaat < 2:622985‑M1/138‑76 (MQ=255) ggCACCCGCGAAGTGGTTCTCGGGATGGCGCAACGTGGTCGCCTGAACGTGCTGGgtaaaaaaccgcaagacttgttcgacgagttcgccggtaaacataaagaacacctcggcacgggtgacgtgaaataccacatgggctt < 1:541571‑M1/143‑89 (MQ=255) gggaaGTGGTGCGCGGGAGGGCGCACCGTGGGGGTCTGAAGGGGCTGGgtaaaaaaccgcaagacttgttcgacgagttcgccggtaaacataaagaacacgtcggaaggggggacgtgaaataccacatgggcttctcgtct < 2:247258‑M1/141‑96 (MQ=255) gcgAAGTGGTTCTCGGGATGGCGCAACGTGGTCGTCTGAACGGGCGGGgtaaaaaaccgcaagacttgttcgacgagttcgccggtaaacataaagaacacctcggcacgggtgacgtgaaataccacatgggcttctcgtct < 1:85566‑M1/143‑96 (MQ=255) gAAGTGGTTCTCGGGATGGCGCACCGTGGTCGTCTGAACGTGCTGGgtaaaaaaccgcaagacttgttcgacgagttcgccggtaaacataaagaacacctcggcacgggtgacgtgaaataccgcatgggcttctcgtctga < 1:40917‑M1/143‑98 (MQ=255) tctcGGGATGGCGCACCGTGGTCGTCTGAACGTGCTGGgtaaaaaaccgccagacttgttcgacgagttcgccggtaaacataaagaacacctctgcacgggtgacgtgaactacgccattggcttctcgtctgacttcctct > 1:421074‑M1/1‑38 (MQ=255) tctcGGGATGGCGCACCGTGGTCGTCTGAACGTGCTGGgtaaaaaaccgcaagacttgttcgacgagttcgccggtaaacataaagaacacctcggcacgggtgacgtgaaataccacatgggcttctcgtctgacttccaga > 1:526804‑M1/1‑38 (MQ=255) cACCGTGGTCGGCTGAGCGGGCTGGgtaaaaatccgcaagacgtgttcgacgaggtcgccggtaaacataaagagcacctcggcacgggtgacgtgaaataccacatgggcttctcgtctgacttccagaccgatggcggcct < 2:438339‑M1/143‑119 (MQ=255) cACCGTGGGCGGCTGAGCGTGCTGGgtgaaagtccgcacgacgcgtacgacgcggtcgccggtaaacataaagagcacctcggcacgggtgacgtgaaataccacatgggcttctcgtctgacttccagaccgatggcggcct < 2:284681‑M1/143‑119 (MQ=255) gtcgtcTGAACGTGCTGGgtaaaaaaccgcaagacttgttcgacgagttcgccggtaaacataaagaacacctcggcacgggtgacgtgaaataccacatgggcttctcgtctgacttccagaccgatggcggcctggtgcac < 1:74138‑M1/143‑126 (MQ=255) tcgtcTGAACGTGCTGGgtaaaaaaccgcaagacttgttcgacgagttcgccggtaagcataaagaacacctcggcacgggtgacgtgaaataccacatgggcttctcgtctgacttccagaccgatggcggcctggtgcacc > 1:413033‑M1/1‑17 (MQ=255) tGGgtaaaaaaccgcaagacttgttcgacgagttcgccggtaaacataaagaacacctcggcacgggtgacgtgaaataccacatgggcttctcgtctgacttccagaccgatggcggcctggtgcacgtggcgctggcgttt > 1:630244‑M1/1‑3 (MQ=255) | TTCCCTGGCGCAAAACGCTTCTCGCTGGAAGGCGGTGACGCGTTAATCCCGATGCTTAAAGAGATGATCCGCCACGCTGGCAACAGCGGCACCCGCGAAGTGGTTCTCGGGATGGCGCACCGTGGTCGTCTGAACGTGCTGGTGAACGTGCTGGGTAAAAAACCGCAAGACTTGTTCGACGAGTTCGCCGGTAAACATAAAGAACACCTCGGCACGGGTGACGTGAAATACCACATGGGCTTCTCGTCTGACTTCCAGACCGATGGCGGCCTGGTGCACCTG > NC_000913/759366‑759647 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |