| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 759,508 | (TGAACGTGCTGG)2→1 | coding (803‑814/2802 nt) | sucA → | 2‑oxoglutarate decarboxylase, thiamine triphosphate‑binding |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 759508 | 759519 | 12 | 24 [0] | [0] 24 | sucA | 2‑oxoglutarate decarboxylase, thiamine triphosphate‑binding |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 759507 | 0 (0.000) | 23 (0.660) | 18/260 | 1.0 | 100% | coding (802/2802 nt) | sucA | 2‑oxoglutarate decarboxylase, thiamine triphosphate‑binding |
| ? | NC_000913 | 759520 = | 0 (0.000) | coding (815/2802 nt) | sucA | 2‑oxoglutarate decarboxylase, thiamine triphosphate‑binding | |||||
AAACGCTTCTCGCTGGAAGGCGGTGACGCGTTAATCCCGATGCTTAAAGAGATGATCCGCCACGCTGGCAACAGCGGCACCCGCGAAGTGGTTCTCGGGATGGCGCACCGTGGTCGTCTGAACGTGCTGGTGAACGTGCTGGGTAAAAAACCGCAAGACTTGTTCGACGAGTTCGCCGGTAAACATAAAGAACACCTCGGCACGGGTGACGTGAAATACCACATGGGCTTCTCGTCTGACTTCCAGACCGATGGCGGCCTGGTGCACCTGGCGCTGGCGTTT > NC_000913/759378‑759659 | ttccctggcgcaaaacgcttctcgctggaaggcggtgacgcgttaatcccgatgcttaaagagatgatccgccacgctggcaacagcggcacccgcgaagtggtgctcgggatggcgcaccgtggtcgtctgaacgtgctggg > 1:473774‑M2/143‑143 (MQ=255) tggaaggcggtcacgcgtcaatcccgatgcttaaagagatgatccgccacgctggcaacagcggcacccgcgaagtggttctcgggatggcgcaccgtggtcgtctgaacgtgctggGTAAAAAACCGCAAGACTTGTTcgac < 1:246940‑M2/26‑1 (MQ=255) gcggtgacgcgttaatcccgatgcttaaagagatgatccggcacgctggcaacagcggcacgcgcgtagtggttgtggggatggcgcgccgtgggcgtcggaacgggctggGTAAAAAACCGCAAGACTTGTTCGACGAGTTc > 2:528390‑M2/112‑143 (MQ=255) gcggtgacgcgttaatcccgatgcttaaagagatgatccgccacgctggcaacagcggcccccgcgcagtggttctcgggatggcgcaccgtggtcgtctgaacgtgctggGTAGAAAACCGCACGACGTGTTCGACGAGTTc > 2:35493‑M2/112‑143 (MQ=255) gcggtgacgcgttaatcccgatgcttaaagagatgatccgccacgctggcaacagcggcacccgcgaagtggttctcgggatggcgcaccgtggtcgtctgcacgtgctggGTAAAAAACCGCAAGACTTGTTCGACGAGTTc > 1:549145‑M2/112‑143 (MQ=255) tgacgcgttaatcccgatgcttaaagagatgatccgccacgctggcaacagcggcacccgcgaagtggttctcgggatggcgcaccgtggtcgtctgaacgtgctggGTAAAAAACCGCAAGACTTGTTCGACGAGTTCGCCg < 1:27689‑M2/36‑1 (MQ=255) gcgttaatcccgatgcttaaagagatgatccgccacgctggcaacagcggcacccgcgaagtggttctcgggatggcgcaccgtggtcgtctgaacgtgctggGTAAAAAACCGCAAGACTTGTTCGACGAGTTCGCCGGTaa > 1:208913‑M2/104‑143 (MQ=255) gccgcatgcttaaagagaggatccgccactctggcaacagcggcacccgcgaagtggttctcgggatggcgcaccgtggtcgtctgaacgtgctggGTAAAATACCGCAAGACTGGTTCGACGAGTTCGCCGGTAAACATaaa < 1:494144‑M2/47‑1 (MQ=255) ccgatgcttaaagagatgatccgccacgctggcaacagcggcacccgcgaagtggttctcgggatggcgcaccgtggtcgtctgaacgtgctggGTAAAAAACCGCAAGACTTGTTCGACGAGTTCGCCGGTAACCCTAAAGa > 1:253066‑M2/95‑143 (MQ=255) cgatgcttaaagagatgatccgccacgctggcaacagcggcacccgcgaagtggttctcgggatggcgcaccgtggtcgtctgaacgtgctggGTAAAAAACCGCAAGACTTGTTCGACGAGTTCGCCGGTAAACATAAAGaa < 1:605379‑M2/50‑1 (MQ=255) aaagagatgatccgccacgctggcaacagcggcacccgcgaagtggttctcgggatggcgcaccgtggtcgtctgaacgtgctggGTAAAAAACCGCAAGGCTTGTTCGACGAGTTCGCCGGTAAACATAAAGAACACCTCgg > 1:318612‑M2/86‑143 (MQ=255) gatccgccacgctggcaacagcggcacccgcgaagtggttctcgggatggcgcaccgtggtcgtctgaacgggctggGGAACAAACCGCAAGACTTGTTCGACGAGTGCGCCGCTAAACATAAAAGACACCCCGGCACGGGTg > 2:586265‑M2/78‑143 (MQ=255) ctctagcaacagccggacccgcgaattgggtctcggcatggcgcaccgtgctcgtccgaacgtgctgtGTAAAAAACCGCAGGACTTGTTCGACGAGTTCGCCGGTAAACATAAAGACCACCTCGGCACGGGTGACGTGAAAt < 2:622985‑M2/75‑1 (MQ=255) ggcacccgcgaagtggttctcgggatggcgcaacgtggtcgcctgaacgtgctggGTAAAAAACCGCAAGACTTGTTCGACGAGTTCGCCGGTAAACATAAAGAACACCTCGGCACGGGTGACGTGAAATACCACATGGGCtt < 1:541571‑M2/88‑1 (MQ=255) gggaagtggtgcgcgggagggcgcaccgtgggggtctgaaggggctggGTAAAAAACCGCAAGACTTGTTCGACGAGTTCGCCGGTAAACATAAAGAACACGTCGGAAGGGGGGACGTGAAATACCACATGGGCTTCTCGTCt < 2:247258‑M2/95‑1 (MQ=255) gcgaagtggttctcgggatggcgcaacgtggtcgtctgaacgggcgggGTAAAAAACCGCAAGACTTGTTCGACGAGTTCGCCGGTAAACATAAAGAACACCTCGGCACGGGTGACGTGAAATACCACATGGGCTTCTCGTCt < 1:85566‑M2/95‑1 (MQ=255) gaagtggttctcgggatggcgcaccgtggtcgtctgaacgtgctggGTAAAAAACCGCAAGACTTGTTCGACGAGTTCGCCGGTAAACATAAAGAACACCTCGGCACGGGTGACGTGAAATACCGCATGGGCTTCTCGTCTGa < 1:40917‑M2/97‑1 (MQ=255) tctcgggatggcgcaccgtggtcgtctgaacgtgctggGTAAAAAACCGCCAGACTTGTTCGACGAGTTCGCCGGTAAACATAAAGAACACCTCTGCACGGGTGACGTGAACTACGCCATTGGCTTCTCGTCTGActtcctct > 1:421074‑M2/39‑140 (MQ=255) tctcgggatggcgcaccgtggtcgtctgaacgtgctggGTAAAAAACCGCAAGACTTGTTCGACGAGTTCGCCGGTAAACATAAAGAACACCTCGGCACGGGTGACGTGAAATACCACATGGGCTTCTCGTCTGACTTCCAGa > 1:526804‑M2/39‑143 (MQ=255) caccgtggtcggctgagcgggctggGTAAAAATCCGCAAGACGTGTTCGACGAGGTCGCCGGTAAACATAAAGAGCACCTCGGCACGGGTGACGTGAAATACCACATGGGCTTCTCGTCTGACTTCCAGACCGATGGCGGCCt < 2:438339‑M2/118‑1 (MQ=255) caccgtgggcggctgagcgtgctggGTGAAAGTCCGCACGACGCGTACGACGCGGTCGCCGGTAAACATAAAGAGCACCTCGGCACGGGTGACGTGAAATACCACATGGGCTTCTCGTCTGACTTCCAGACCGATGGCGGCCt < 2:284681‑M2/118‑1 (MQ=255) gtcgtctgaacgtgctggGTAAAAAACCGCAAGACTTGTTCGACGAGTTCGCCGGTAAACATAAAGAACACCTCGGCACGGGTGACGTGAAATACCACATGGGCTTCTCGTCTGACTTCCAGACCGATGGCGGCCTGGTGCAc < 1:74138‑M2/125‑1 (MQ=255) tcgtctgaacgtgctggGTAAAAAACCGCAAGACTTGTTCGACGAGTTCGCCGGTAAGCATAAAGAACACCTCGGCACGGGTGACGTGAAATACCACATGGGCTTCTCGTCTGACTTCCAGACCGATGGCGGCCTGGTGCAcc > 1:413033‑M2/18‑143 (MQ=255) tggGTAAAAAACCGCAAGACTTGTTCGACGAGTTCGCCGGTAAACATAAAGAACACCTCGGCACGGGTGACGTGAAATACCACATGGGCTTCTCGTCTGACTTCCAGACCGATGGCGGCCTGGTGCACGTGGCGCTGGCGttt > 1:630244‑M2/4‑143 (MQ=255) | AAACGCTTCTCGCTGGAAGGCGGTGACGCGTTAATCCCGATGCTTAAAGAGATGATCCGCCACGCTGGCAACAGCGGCACCCGCGAAGTGGTTCTCGGGATGGCGCACCGTGGTCGTCTGAACGTGCTGGTGAACGTGCTGGGTAAAAAACCGCAAGACTTGTTCGACGAGTTCGCCGGTAAACATAAAGAACACCTCGGCACGGGTGACGTGAAATACCACATGGGCTTCTCGTCTGACTTCCAGACCGATGGCGGCCTGGTGCACCTGGCGCTGGCGTTT > NC_000913/759378‑759659 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |