breseq  version 0.32.0  revision 6ff6de7d1b87 mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Marginal new junction evidence (sorted from low to high skew)
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4436130	136 (1.060)	3 (0.020)	3/504	NT	2.0%	coding (437/1944 nt)	cpdB	2':3'‑cyclic‑nucleotide 2'‑phosphodiesterase
	?	NC_000913	= 4436331	166 (1.310)					coding (236/1944 nt)	cpdB	2':3'‑cyclic‑nucleotide 2'‑phosphodiesterase
*	?	NC_000913	= 3594260	140 (1.100)	3 (0.020)	3/506	NT	2.0%	coding (1220/1278 nt)	livM	branched‑chain amino acid ABC transporter permease
	?	NC_000913	= 3594475	148 (1.170)					coding (1005/1278 nt)	livM	branched‑chain amino acid ABC transporter permease
*	?	NC_000913	= 3579386	153 (1.200)	3 (0.020)	3/490	NT	2.2%	coding (259/696 nt)	yhhW	quercetinase activity in vitro
	?	NC_000913	= 3579469	115 (0.940)					coding (176/696 nt)	yhhW	quercetinase activity in vitro
*	?	NC_000913	3312740 =	149 (1.170)	3 (0.020)	3/500	NT	2.1%	coding (36/945 nt)	truB	tRNA pseudouridine synthase B: tRNA pseudouridine(55) synthase and putative tmRNA pseudouridine(342) synthase
	?	NC_000913	3312985 =	132 (1.050)					coding (192/402 nt)	rbfA	30s ribosome binding factor
*	?	NC_000913	3051050 =	155 (1.210)	3 (0.020)	3/484	NT	2.1%	intergenic (‑385/+63)	gcvT/ubiI	aminomethyltransferase, tetrahydrofolate‑dependent, subunit (T protein) of glycine cleavage complex/2‑octaprenylphenol hydroxylase, FAD‑dependent
	?	NC_000913	3051233 =	131 (1.080)					coding (1083/1203 nt)	ubiI	2‑octaprenylphenol hydroxylase, FAD‑dependent
*	?	NC_000913	= 909508	148 (1.160)	3 (0.020)	3/508	NT	2.0%	coding (1542/1719 nt)	poxB	pyruvate dehydrogenase, thiamine triphosphate‑binding, FAD‑binding
	?	NC_000913	909512 =	149 (1.170)					coding (1538/1719 nt)	poxB	pyruvate dehydrogenase, thiamine triphosphate‑binding, FAD‑binding