| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 62,822 | Δ16 bp | coding (428‑443/2907 nt) | rapA ← | RNA polymerase remodeling/recycling factor ATPase, RNA polymerase‑associated, ATP‑dependent RNA translocase |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 62822 | 62837 | 16 | 57 [0] | [0] 57 | rapA | RNA polymerase remodeling/recycling factor ATPase, RNA polymerase‑associated, ATP‑dependent RNA translocase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 62821 | 0 (0.000) | 55 (0.950) | 48/280 | 0.1 | 100% | coding (444/2907 nt) | rapA | RNA polymerase remodeling/recycling factor ATPase, RNA polymerase‑associated, ATP‑dependent RNA translocase |
| ? | NC_000913 | 62838 = | 0 (0.000) | coding (427/2907 nt) | rapA | RNA polymerase remodeling/recycling factor ATPase, RNA polymerase‑associated, ATP‑dependent RNA translocase | |||||
GTTGCTGATGCAGGATCATCCCGGCTTCAATGGTTTTCCCTAAACCCACTTCGTCAGCCAGCAGGACGCGCGGCGCGTGGCGGCGACCAACATCATGAGCGATGTTGAGCTGATGCGGGATCAGGCTGGTACGCTGACCGCGCAGGCCGCTGTACGGCATACGGAACTGTTCGCTGGAATATTTACGCGCGCGATAACGCAGCGCAAAGCGGTCCATACGGTCAATCTGCCCGGCAAACAGACGGTCCTGCGGTTTGCTGAACACCAGTTTGCTATCAAGG > NC_000913/62682‑62962 | gTTGCTGATGCAGGATCATCCCGGCTTCAATGGTTTTCCCTAAACCCACTTCGTCAGCCAGCAGGACGCGCGGCGCGTGGCGGCGACCAACATCATGAGCGCTGTTGAGCTGATGCGGGATCAGGCTGGTACGCTGACCGggc > 1:277529‑M1/1‑140 (MQ=255) tGATGCAGGATCATCCCGGCTTCAATGGTTTTCCCTAAACCCACTTCGTCAGCCAGCAGGACGCGCGGCGCGTGGCGGCGACCAACATCATGAGCGATGTTGAGCTGATGCGGGCTCAGGCTGGCACACTGACcggaatccgc > 1:906360/1‑135 (MQ=255) aTGCAGGATCACCCGGGCTTCCATGGTTTTCCCTAAACCCACTTCGTCAGCCAGCAGGACGCGCGGCGCGTGGCGGCGACCAACATCATGAGCGATGTTGAGCTGATGCGGGATCAGGCTGGTACGCTGACCGgcatacggaa < 2:199480‑M1/143‑11 (MQ=255) cagcccggcTTCGATGGTTTTCCCTAAACCCACGTCGTCAGCCAGCAGGACGCGCGGCGCGTGGCGGCGACCAACATCGTGAGCGATGTTGAGCTGATGCGGGATCAGGCTGGTACGCTGACCGgcatacggaactgttcgct < 2:79866‑M1/140‑20 (MQ=255) cgatgttgttccctagatCCACTTCGTCTGCCAGCAGGATGCGCGGCGCGTGGCGGCGACCAACATCAGTGTCGATGGTGAGCTGATGCGGGATCAGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatatttac < 1:271542‑M1/135‑31 (MQ=255) cAATGGTGGTCCCGAAGCCGCCTGCGTCCGCCAGCAGGACGCGCGGCGCGTGGCGGCGACCAACATCATGAGCGATGTTGAGCTGATGCGGGATCAGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatattgac < 1:412550‑M1/143‑31 (MQ=255) aTGGTTTTCCCTAAACCCACTTCGTCAGCCAGCAGGACCCGCGGCGCGTGGCGGCGACCAACATCATGAGCGATGTTGAGCTGATGCAGGATCAGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatatttacgc > 2:398072‑M1/1‑111 (MQ=255) ggTTTTCCCTAAACCCACTTCGTCAGCCAGCAGGACGCGCGGCGCGTGGCGGCGACCAACATCATGAGCGATGTTGAGCTGATGCGGGATCAGGCTGGTACGCTGAACGgaccacggaactgttagacgctatatttacgcgc > 1:873818‑M1/1‑109 (MQ=255) cccTAAACCCACTTCGTCAGCCAGCAGGACGCGCGGCGCGTGGCGGCGACCAACATCATGAGCGATGTTGAGCTGATGCGGGATCAGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatatttacgcgcgcgata < 2:947928‑M1/143‑41 (MQ=255) cTAAACCCACTTCGTCAGCCAGCAGGACGCGCGGCGCGTGGCGGCGACCAACATCATGAGCGATGTTGAGCTGATGCGGGATCAGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatatttacgcgcgcgatgac > 1:931091‑M1/1‑101 (MQ=255) tAAACCCACTTCGTCAGCCAGCAGGACGCGCGGCGCGTGGCGGCGACCAACATCATGAGCGATGTTGAGCTGATGCGGGATCAGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatatttacgcgcccgataacg > 2:767299‑M1/1‑100 (MQ=255) aaCCCACTTCGTCAGCCAGCAGGACGCGCGGCGCGTGGCGGCGACCAACATCATGAGCGATGTTGAGCTGATGCGGGATCAGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatatttacgcgcgcgataacgca < 2:544547‑M1/143‑46 (MQ=255) cccACTTCGTCAGCCAGCAGGACGCGCGGCGCGTGGCGGCGACCAACATCATGAGCGATGTTGAGCTGATGTGGGGGCAGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatatttccgagcgcgataacgcagc > 2:609450‑M1/1‑96 (MQ=255) cccACTTCGTCAGCCAGCAGGACGCGCGGCGCGTGGCGGCGACCAACATCATGAGCGATGTTGAGCTGATGCGGGATCAGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatatttacgcgcgcgataacgcagc < 2:919984‑M1/143‑48 (MQ=255) aCTTCGTCAGCCAGCAGGACGCGCGGCGCGTGGCGGCGACCAACATCATGAGCGATGTTGAGCTGATGCGGGATCAGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatatttacgcgcgcgataacgcagcgca < 1:398303‑M1/143‑51 (MQ=255) ttCGTCAGCCAGCAGGACGCGCGGCGCGTGGCGGCGACCAACATCATGAGCGATGTTGAGCTGATGCGGGATCAGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatatttacgcgcgcgataacgcagcgcaaa < 2:445751‑M1/143‑53 (MQ=255) tCGTCAGCCAGCAGGACGCGCGGCGCGTGGCGGCGACCAACATCATGAGCGATGTTGAGCTGATGCGGGATCAGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatatttacgcgcgcgataacgcagcgcaaag < 1:262891‑M1/143‑54 (MQ=255) gTCGGCCGGCAGGACGCGCGGCGCGTGGCGGCGACCAACATCATGAGCGATGTTGAGCTGATGCGGGATCAGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatatttacgcgcgcgataacgcagcgcaaagcg < 1:484157‑M1/143‑56 (MQ=255) tCAGCCAGCAGGACGCGCGGCGCGTGGCGGCGACCAACATCATGAGCGATGTTGAGCTGATGCGGGATCAGGCTGGTACGCTGACCGgcatacggagctgttcgcgggaatatttacgcgcgcgatagcgcagcgcaaagcgg > 2:222484‑M1/1‑87 (MQ=255) agccagcAGGACGCGCGGCGCGTGGCGGCGACCAACATCATGAGCGATGTTGAGCTGATGCGGGATCAGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatatttacgcgcgcgataacgcagcgcaaagcggtc < 2:254564‑M1/143‑59 (MQ=255) ccagcAGGACGCGCGGCGCGTGGCGGCGACCAACATCATGGGCGATGTTGAGCTGAGGCGGGATCAGGCTGGTACGCTGACCGgcatgcggaagtgttcgctgaaataataacgcgcgcgcgaacacagagcaaaacggtaca > 1:541009‑M1/1‑83 (MQ=255) ccagcAGGACGCGCGGCGCGTGGCGGCGACCAACATCATGAGCGATGTTGAGCTGATGCGGGATCAGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatatttacgcgcgcgatcacgcagcgcaaagcggtcca > 2:745839‑M1/1‑83 (MQ=255) cagcgcgcgcggcgcgTGGCGGCGACCAACATGATGAGCGATGTTGAGCTGATGCGGGATCAGGCTGGTACGCTGATCGgcatacgtaactgttcgctggaatatttacgcgcgcatgaacgtggctcaaagcggtccatacg < 1:618684‑M1/138‑65 (MQ=255) cagGACGCGCGGCGCGTGGCGGCGACCAACATCATGAGCGATGTTGAGCTGATGCGGGATCAGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatatttacgcgcgcgataacgcagcgcaaagcggtccatacg < 1:489515‑M1/143‑65 (MQ=255) gggtgcggggcgctgggcGGCGGCCAACATCATGAGCGATGTTGAGGTGATGCGGGATCAGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatatttacgcgcgcgataacgcagcgcaaagcggtccatacggt < 1:384725‑M1/139‑67 (MQ=255) ggACGCGCGGCGCGTGGCGGCGACCAACATCATGAGCGATGTTGAGCTGATGCGGGATCAGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatatttacgcgcgcgataacgcagcgcaaagcggtccatacggt < 2:567479‑M1/143‑67 (MQ=255) cggcgcgGGGCGGCGACCAACATCATGAGCGATGTTGAGCTGATGCGGGAGCAGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatatttacgcgcgcgataacgcagcgcaaagcggtccatacggtcaatctg < 1:281763‑M1/143‑74 (MQ=255) gcgcgTGGCGGCGACCAACATCATGAGCGATGTTGAGCTGATGCGGGATCAGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatatttacgcgcgcgataacgcagcgcaaagcggtccatacggtccatctgcc > 2:270582‑M1/1‑68 (MQ=255) cgTGGCGGCGACCAACATCATGAGCGATGTTGAGCTGATGCGGGATCAGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatatttacgcgcgcgataacgcagcgcaaagcggtccatacggtcaatctgcccgg < 2:503015‑M1/143‑79 (MQ=255) gggcggcgACCAGCATCATGAGCGATGTTGGGCTGAGGCGGGATCAGGCGGGTGCGCGGACCGgcatacggaactgttcgctgggatatttacgcgcgcgataacgcagcgcaaagcggtccatacggtcaatctgcccggca < 1:489104‑M1/142‑81 (MQ=255) ggcgggcagcgacatcatgagcgATGTTGAGCTGATGCGGGATCAGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatatttacgcgcgcgataacgcagcgcaaagcggtccatacggtcaatctgcccggcaa < 1:868694‑M1/132‑82 (MQ=255) gcggcgACCAACATCATGAGCGATGTTGAGCTGATGCGGGATCAGGCTGGTACGCTGACCGgcatacgggacggttcgctggaatatttacgcgcgcgataacgcagcgcaaagcggtccatacggccaagctgcccggcaaa > 1:561167‑M1/1‑61 (MQ=255) cggcgACCAACATCATGAGCGATGTTGAGCTGATGCGGGATCAGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatatttacgcgcgcgagaacgcagcgcaaagcgggccatacgggcaatctgcccggcaacc > 1:416309‑M1/1‑60 (MQ=255) aCCAACATCATGAGCGATGTTGAGCTGATGCGGGATCAGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatatttacgcgcgcgataacgcagcgcaaagcggtccatacggtcaatctgcccggcaaacagacg < 2:892336‑M1/143‑89 (MQ=255) ggagcgagcgtgagctgatgcGGGATCAGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatatctacgcgcgcgataacgcagcgcaaagcggtccatacggtcaatctgcccggcaaacagacggtcctgcggt < 1:834692‑M1/133‑99 (MQ=255) aGCGATGTGGAGCTGATGCGTGATCAGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatatttacgcgcgaaataactcagcgcaaagcggtccatacggtcaatctgcccggcaaacagacggtcctgcggttt < 2:277300‑M1/143‑101 (MQ=255) gCGATGGTGAGCGGAAGCGGGAGCAGGCGGGTACGCGGACCGgcatacggaactgttcgctggaatatttacgcgcgcgataacgcagcgcaaagcggtccatacggtcaatctgcccggcaaacagacggtcctgcggtttg < 2:263007‑M1/143‑102 (MQ=255) cGATGTTGAGCTGATGCGGGATCAGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatatttacgcgcgcgataacgcagcgcaaagcggtccatacggtcgatctgcccggcaaacagacggtccggcggtttgc > 2:661152‑M1/1‑41 (MQ=255) tgtgGAGCTGATGCGGGATCAGGCTGGTACGCTGACCGgcatccggagctgtgcgctggaatatttccgcgcgcgataacgcagcgcaaagcggtccatacggtcaatctgcccggcaaacagacggtcctgcggtttgctga < 2:463304‑M1/143‑106 (MQ=255) gTTGAGCTGAGGCGGGATCAGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatatttacgcgcgcgataacgcagcgcaaagcggtccatacggtcaatctgcccggcaaacagacggtcctgcggtttgctgaa < 1:271533‑M1/143‑107 (MQ=255) ggaGCTGATGCGGGAGCAGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatattgacgcgcgcgataacgcagcgcaaagcggtccatacggtcaatctgcccggcaaacagacggtcctgcggtttgctgaaca < 1:97338‑M1/142‑109 (MQ=255) cTGATGCGGGATCAGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatatttacgcgcgcgataacgcagcgcaaagcggtccatacggtcgatctgcccggcaaacagacggtccttcggtttgctgaacaccag > 2:84838‑M1/1‑31 (MQ=255) gATGCGGGATCAGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatatttacgcgcgcgataacgcagcgcaaagcggtccatacggtcaatctgcccggcaaacagacggtcctgcggtttgctgaacaccagtt > 2:432291‑M1/1‑29 (MQ=255) gCGGGATCAGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatatttacgcgcgcgataacgcagcgcaaagcggtccatacggtcaatctgcccggcaaacagacggtcctgcggtttgctgaacaccagtttgc > 1:994718‑M1/1‑26 (MQ=255) gATCAGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatatttacgcgcgcgataacgcagcgcaaagcggtccatacggtcaatctgcccggcaaacagacggtcctgcggtttgctgaacaccagtttgctatc > 1:149782‑M1/1‑22 (MQ=255) gATCAGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatatttacgcgcgcgataacgcagcacaaagcggtccatacggtcaatctgcccggcaaacagacggtcctgcggtttgctgaacaccagtttgcgatc > 2:731226‑M1/1‑22 (MQ=255) tCAGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatatttacgcgcgcgataacgcagcgcaaagcggtccatacggtcaatctgcccggcaaacagacggtcctgcggtttgctgaacaccagtttgctatcaa < 2:588650‑M1/143‑124 (MQ=255) cAGGCGGGTACGCTGACCGgcatacggaactgttcgctggaatatttacgcgcgcgataacgcagcgcaaagcggtccatacggtcaatctgcccggcaaacagacggtcctgcggtttgctgaacaccagtttgctatcaag < 1:7912‑M1/143‑125 (MQ=255) aGGCTGGTACGCTGACCGgcatacggaactgttcgctggaatatttacgcgcgcgataacgcagcgcaaagcggtccatacggtcaatctgcccggcaaacagacggtcctgccatttgctgcacaccagctcgctatcaagg > 1:347575‑M1/1‑18 (MQ=255) ggCTGGTACGCTGACCGgcatacggaactgttcgctggaatatttacgcgcgcgataacgcagcgcaaagcggtcgatacggtccatctgcccggcaaacagacggtactgcggtttgctggacacaaggttgcttacaagga > 1:279869‑M1/1‑17 (MQ=255) ggCTGGCACGCTGAGCGgcagacggcactgttcgctggaatatttacgcgcgcgataacgcagcgcaaagcggtccatacggtcaatctgccgggcaaacagacggtcctgcggtttgctgaataccagtttgctatcaagga < 1:831763‑M1/143‑127 (MQ=255) gCTGGTACGCTGACCGgcatacggaactgttcgctggaatatttacgcgcgcgataacgcagcgcaaagcggtccatacggtcaatctgcccggcaaacagacggtcctgcggtttgctgaacaccagttccgtatcaaggaa > 1:543467‑M1/1‑16 (MQ=255) gTACGCTGACCGgcatacgtaactgttcgctgaaatatttacgcgcgcgataacgcagcgcaaagcggtccatacggtcaatctgcccggcaaacagacggtcctgcggtttgctgaacaccagtttgctatcaaggaaaact < 2:277529‑M1/143‑132 (MQ=255) aCGCTGACCGgcctacggaactgttcgttggaatatttacgcgcgcgataacgcagcgcaaagcggtccatacggtcaatctgcccggcaaacagacggtcctgcggtttgctgaacaccagtttgctatcaaggaaaacttc < 1:728559‑M1/143‑134 (MQ=255) tGACCGgcatacggaactgttcgctggaatatttacgcgcgcgataacgcagcgcaaagcggtccatacggtcaatctgcccggcaaacagacggtcctgcggtttgctgaacaccagtttgctatcaaggaaaacttcacgc > 2:806935‑M1/1‑6 (MQ=255) ccGgcatacggaactgttcgctggaatatttacgcgcgcgataacgcagcgcaaagcggtccatacggtcaatctgcccggcaaacagacggtcctgcggtttgctgaacaccagtttgctatcaaggaaaacttcacgcagg < 1:665621‑M1/143‑141 (MQ=255) cGgcatacggaactgttcgctggaatatttacgcgcgcgataacgccgcgcacagcggtccatacggtcaatctgcccggcaaacagacggtccagcggtttgctgcacacccgtttggtatcaaggcaacgttcacgcaggg > 1:663229‑M1/1‑2 (MQ=255) | GTTGCTGATGCAGGATCATCCCGGCTTCAATGGTTTTCCCTAAACCCACTTCGTCAGCCAGCAGGACGCGCGGCGCGTGGCGGCGACCAACATCATGAGCGATGTTGAGCTGATGCGGGATCAGGCTGGTACGCTGACCGCGCAGGCCGCTGTACGGCATACGGAACTGTTCGCTGGAATATTTACGCGCGCGATAACGCAGCGCAAAGCGGTCCATACGGTCAATCTGCCCGGCAAACAGACGGTCCTGCGGTTTGCTGAACACCAGTTTGCTATCAAGG > NC_000913/62682‑62962 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |