| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,720,634 | Δ1,442 bp | IS150‑mediated | insJ–insK | insJ, insK |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3720634 | 3722075 | 1442 | 107 [0] | [0] 101 | insJ–insK | insJ,insK |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3720633 | 0 (0.000) | 101 (1.400) | 40/68 | 0.0 | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | NC_000913 | 3722076 = | 0 (0.000) | intergenic (+27/+252) | insK/glyS | IS150 conserved protein InsB/glycine‑‑tRNA ligase subunit beta | |||||
Only 100 of 101 total aligned reads displayed.
TTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3720600‑3720633‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACTTTGATTTATAGTCAGGTGGGGCTTTTCTCT > NC_000913/3722076‑3722109 TTCCCCGCCTCCTGTGTTGATTTCCAACGAGTATA > 1:1454021/1‑35TTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATA > 1:6492388/1‑35TTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATA > 1:2315331/1‑35TTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATA < 1:68042/35‑1TTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATA < 1:1086815/35‑1 TCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAA < 1:4844713/35‑1 TCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAA < 1:5161525/35‑1 TCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAA < 1:6089973/35‑1 CCCAGCCTCCTGTGTTGATTTCCAACGAGTATAAC > 1:1955185/1‑35 CCCAGCCTCCTGTGTTGATTTCCAACGAGTATAAC < 1:483656/35‑1 CCCAGCCTCCTGTGTTGATTTCCAACGAGTATAAC > 1:665038/1‑35 CCCAGCCTCCTGTGTTGATTTCCAACGAGTATAAC < 1:4163094/35‑1 CCCAGCCTCCTGTGTTGATTTCCAACGAGTATAAC > 1:1986950/1‑35 CCAGCCTCCTGTGTTGATTTCCAACGAGTATAACT > 1:13372/1‑35 CAGCCTCCTGTGTTGATTTCCAACGAGTATAACTT < 1:4642287/35‑1 CAGCCTCCTGTGTTGATTTCCAACGAGTATAACTT < 1:7466642/35‑1 AGCCTCCTGTGTTGATTTCCAACGAGTATAACTTT < 1:1629354/35‑1 AGCCTCCTGTGTTGATTTCCAACGAGTATAACTTT > 1:2798842/1‑35 AGCCTCCTGGGTTGATTTCCAACGAGTATAACTTT > 1:1756712/1‑35 GCCTCCTGTGTTGATTTCCAACGAGTATAACTTTG < 1:89965/35‑1 CTCCTGTGTTGATTTCCAACGAGTATAACTTTGAT < 1:7403102/35‑1 TCCTGTGTTGATTTCCAACGAGTATAACTTTGATT < 1:5997961/35‑1 TCCTGTGTTGATTTCCAACGAGTATAACTTTGATT < 1:461387/35‑1 TCCTGTGTTGATTTCCAACGAGTATAACTTTGATT > 1:6766802/1‑35 TCCTGTGTTGATTTCCAACGAGTATAACTTTGATT < 1:94625/35‑1 TCCTGTGTTGATTTCCAACGAGTATAACTTTGATT > 1:1783786/1‑35 CCTGTGTTGATTTCCAACGAGTATAACTTTGATTT < 1:2220263/35‑1 CCTGTGTTGATTTCCAACGAGTATAACTTTGATTT < 1:5383226/35‑1 CCTGTGTTGATTTCCAACGAGTATAACTTTGATTT < 1:526757/35‑1 CCTGTGTTGATTTCCAACGAGTATAACTTTGATTT < 1:1846729/35‑1 CTGTGTTGATTTCCAACGAGTATAACTTTGATTTA < 1:2288419/35‑1 CTGTGTTGATTTCCAACGAGTATAACTTTGATTTA < 1:6648230/35‑1 CTGTGTTGATTTCCAACGAGTATAACTTTGATTTA < 1:7503629/35‑1 CTGTGTTGATTTCCAACGAGTATAACTTTGATTTA < 1:4132153/35‑1 CTGTGTTGATTTCCAACGAGTATAACTTTGATTTA < 1:5120050/35‑1 CTGTGTTGATTTCCAACGAGTATAACTTTGATTTA < 1:7189511/35‑1 TGTGTTGATTTCCAACGAGTGTAACTTTGATTTAT < 1:2031410/35‑1 TGTGTTGATTTCCAACGAGTATAACTTTGATTTAT < 1:4813820/35‑1 TGTGTTGATTTCCAACGAGTATAACTTTGATTTAT < 1:1942992/35‑1 TGTGTTGATTTCCAACGAGTATAACTTTGATTTAT < 1:1943036/35‑1 TGTGTTGATTTCCAACGAGTATAACTTTGATTTAT < 1:1519044/35‑1 GTGTTGATTTCCAACGAGTATAACTTTGATTTATA < 1:3472510/35‑1 GTGTTGATTTCCAACGAGTATAACTTTGATTTATA < 1:1252242/35‑1 GTGTTGATTTCCAACGAGTATAACTTTGATTTATA < 1:3325139/35‑1 GTGTTGATTTCCAACGAGTATAACTTTGATTTATA < 1:2804961/35‑1 GTGTTGATTTCCAACGAGTATAACTTTGATTTATA < 1:701301/35‑1 TGTTGATTTCCAACGAGTATAACTTTGATTTATAG < 1:4634182/35‑1 TGTTGATTTCCAACGAGTATAACTTTGATTTATAG < 1:1268314/35‑1 TGTTGATTTCCAACGAGTATAACTTTGATTTATAG < 1:3532358/35‑1 TGTTGATTTCCAACGAGTATAACTTTGATTTATAG > 1:123783/1‑35 TGTTGATTTCCAACGAGTATAACTTTGATTTATAG > 1:5453091/1‑35 GTTGATTTCCAACGAGTATAACTTTGATTTATAGc > 1:6398266/1‑34 GTTGATTTCCAACGAGTATAACTTTGATTTATAGT < 1:4856262/35‑1 TTGATTTCCAACGAGTATAACTTTGATTTATAGTC > 1:2368303/1‑35 TTGATTTCCAACGAGTATAACTTTGATTTATAGTC > 1:829686/1‑35 TTGATTTCCAACGAGTATAACTTTGATTTATAGTC > 1:2927090/1‑35 TTGATTTCCAACGAGTATAACTTTGATTTATAGTC < 1:753642/35‑1 TTGATTTCCAACGAGTATAACTTTGATTTATAGTC > 1:2119635/1‑35 GATTTCCAACGAGTATAACTTTGATTTATAGTCAG < 1:6857790/35‑1 GATTTCCAACGAGTATAACTTTGATTTATAGTCAG > 1:4203730/1‑35 GATTTCCAACGAGTATAACTTTGATTTATAGTCAG > 1:5496023/1‑35 ATTTCCAACGAGTATAACTTTGATTTATAGTCAGG > 1:6464027/1‑35 ATTTCCAACGAGTATAACTTTGATTTATAGTCAGG > 1:6391391/1‑35 TCCAACGAGTATAACTTTGATTTATAGTCAGGTGG > 1:709233/1‑35 CAACGAGTATAACTTTGATTTATAGTCAGGTGGGG > 1:5254456/1‑35 AACGAGTATAACTTTGATTTATAGTCAGGTGGGGC < 1:286642/35‑1 AACGAGTATAACTTTGATTTATAGTCAGGTGGGGC > 1:1646513/1‑35 ACGAGTATAACTTTGATTTATAGTCAGGTGGGGCT < 1:1203909/35‑1 ACGAGTATAACTTTGATTTATAGTCAGGTGGGGCT < 1:7508697/35‑1 ACGAGTATAACTTTGATTTATAGTCAGGTGGGGCT > 1:5291507/1‑35 ACGAGTATAACTTTGATTTATAGTCAGGTGGGGCT > 1:5620540/1‑35 CGAGTATAACTTTGATTTATAGTCAGGTGGGGCTT > 1:3404942/1‑35 CGAGTATAACTTTGATTTATAGTCAGGTGGGGCTT > 1:3869798/1‑35 CGAGTATAACTTTGATTTATAGTCAGGTGGGGCTT > 1:47347/1‑35 GAGTATAACTTTGATTTATAGTCAGGTGGGGCTTT < 1:7650784/35‑1 GAGTATAACTTTGATTTATAGTCAGGTGGGGCTTT < 1:2682189/35‑1 GAGTATAACTTTGATTTATAGTCAGGTGGGGCTTT < 1:3681736/35‑1 GAGTATAACTTTGATTTATAGTCAGGTGGGGCTTT < 1:1401057/35‑1 AGTATAACTTTGATTTATAGTCAGGTGGGGCTTTT > 1:2304342/1‑35 AGTATAACTTTGATTTATAGTCAGGTGGGGCTTTT > 1:822943/1‑35 GTATAACTTTGATTTATAGTCAGGTGGGGCTTTTC > 1:5842753/1‑35 GTATAACTTTGATTTATAGTCAGGTGGGGCTTTTC > 1:2432812/1‑35 GTATAACTTTGATTTATAGTCAGGTGGGGCTTTTC > 1:3768612/1‑35 GTATAACTTTGATTTATAGTCAGGTGGGGCTTTTC > 1:6831000/1‑35 GTATAACTTTGATTTATAGTCAGGTGGGGCTTTTC < 1:5387027/35‑1 GTATAACTTTGATTTATAGTCAGGTGGGGCTTTTC < 1:5769494/35‑1 TATAACTTTGATTTATAGTCAGGTGGGGCTTTTCT > 1:274294/1‑35 ATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTC > 1:1001608/1‑35 ATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTC > 1:4407293/1‑35 ATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTC > 1:2010864/1‑35 ATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTC > 1:6547392/1‑35 ATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTC > 1:5355516/1‑35 ATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTC > 1:5355545/1‑35 ATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTC < 1:5967955/35‑1 ATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTC > 1:2303448/1‑35 TAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCT > 1:1968837/1‑35 TAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCT > 1:1645727/1‑35 TAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCT > 1:2159572/1‑35 TAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCT > 1:6443903/1‑35 TAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCT > 1:1065889/1‑35 TTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3720600‑3720633‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACTTTGATTTATAGTCAGGTGGGGCTTTTCTCT > NC_000913/3722076‑3722109 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |