Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
MC JC | NC_000913 | 3,720,634 | Δ1,442 bp | IS150‑mediated | insJ–insK | insJ, insK |
Missing coverage evidence... | ||||||||||
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seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | NC_000913 | 3720634 | 3722075 | 1442 | 107 [0] | [0] 101 | insJ–insK | insJ,insK |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 3720633 | 0 (0.000) | 101 (1.400) | 40/68 | 0.0 | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
? | NC_000913 | 3722076 = | 0 (0.000) | intergenic (+27/+252) | insK/glyS | IS150 conserved protein InsB/glycine‑‑tRNA ligase subunit beta |
Only 100 of 107 total aligned reads displayed.
ATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGA > NC_000913/3720599‑3720667 | aTTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAt > 1:3542725/1‑35 (MQ=255) aTTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAt < 1:6973225/35‑1 (MQ=255) aTTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAt < 1:1226725/35‑1 (MQ=255) aTTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAt < 1:2673622/35‑1 (MQ=255) aTTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAt < 1:2043053/35‑1 (MQ=255) aTTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAt < 1:6268415/35‑1 (MQ=255) ttCCCCGCCTCCTGTGTTGATTTCCAACGAGTATa > 1:1454021‑M1/1‑34 (MQ=255) ttCCCAGCCTCCTGTGTTGATTTCCAACGAGTATa < 1:1086815‑M1/35‑2 (MQ=255) ttCCCAGCCTCCTGTGTTGATTTCCAACGAGTATa < 1:68042‑M1/35‑2 (MQ=255) ttCCCAGCCTCCTGTGTTGATTTCCAACGAGTATa > 1:2315331‑M1/1‑34 (MQ=255) ttCCCAGCCTCCTGTGTTGATTTCCAACGAGTATa > 1:6492388‑M1/1‑34 (MQ=255) tCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaa < 1:6089973‑M1/35‑3 (MQ=255) tCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaa < 1:4844713‑M1/35‑3 (MQ=255) tCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaa < 1:5161525‑M1/35‑3 (MQ=255) cccAGCCTCCTGTGTTGATTTCCAACGAGTATaac > 1:1955185‑M1/1‑32 (MQ=255) cccAGCCTCCTGTGTTGATTTCCAACGAGTATaac < 1:4163094‑M1/35‑4 (MQ=255) cccAGCCTCCTGTGTTGATTTCCAACGAGTATaac > 1:1986950‑M1/1‑32 (MQ=255) cccAGCCTCCTGTGTTGATTTCCAACGAGTATaac < 1:483656‑M1/35‑4 (MQ=255) cccAGCCTCCTGTGTTGATTTCCAACGAGTATaac > 1:665038‑M1/1‑32 (MQ=255) ccAGCCTCCTGTGTTGATTTCCAACGAGTATaact > 1:13372‑M1/1‑31 (MQ=255) cAGCCTCCTGTGTTGATTTCCAACGAGTATaactt < 1:7466642‑M1/35‑6 (MQ=255) cAGCCTCCTGTGTTGATTTCCAACGAGTATaactt < 1:4642287‑M1/35‑6 (MQ=255) aGCCTCCTGTGTTGATTTCCAACGAGTATaacttt < 1:1629354‑M1/35‑7 (MQ=255) aGCCTCCTGTGTTGATTTCCAACGAGTATaacttt > 1:2798842‑M1/1‑29 (MQ=255) gCCTCCTGTGTTGATTTCCAACGAGTATaactttg < 1:89965‑M1/35‑8 (MQ=255) ctcctGTGTTGATTTCCAACGAGTATaactttgat < 1:7403102‑M1/35‑10 (MQ=255) tcctGTGTTGATTTCCAACGAGTATaactttgatt > 1:1783786‑M1/1‑25 (MQ=255) tcctGTGTTGATTTCCAACGAGTATaactttgatt < 1:94625‑M1/35‑11 (MQ=255) tcctGTGTTGATTTCCAACGAGTATaactttgatt < 1:461387‑M1/35‑11 (MQ=255) tcctGTGTTGATTTCCAACGAGTATaactttgatt > 1:6766802‑M1/1‑25 (MQ=255) tcctGTGTTGATTTCCAACGAGTATaactttgatt < 1:5997961‑M1/35‑11 (MQ=255) cctGTGTTGATTTCCAACGAGTATaactttgattt < 1:2220263‑M1/35‑12 (MQ=255) cctGTGTTGATTTCCAACGAGTATaactttgattt < 1:526757‑M1/35‑12 (MQ=255) cctGTGTTGATTTCCAACGAGTATaactttgattt < 1:5383226‑M1/35‑12 (MQ=255) cctGTGTTGATTTCCAACGAGTATaactttgattt < 1:1846729‑M1/35‑12 (MQ=255) ctGTGTTGATTTCCAACGAGTATaactttgattta < 1:5120050‑M1/35‑13 (MQ=255) ctGTGTTGATTTCCAACGAGTATaactttgattta < 1:6648230‑M1/35‑13 (MQ=255) ctGTGTTGATTTCCAACGAGTATaactttgattta < 1:7503629‑M1/35‑13 (MQ=255) ctGTGTTGATTTCCAACGAGTATaactttgattta < 1:7189511‑M1/35‑13 (MQ=255) ctGTGTTGATTTCCAACGAGTATaactttgattta < 1:4132153‑M1/35‑13 (MQ=255) ctGTGTTGATTTCCAACGAGTATaactttgattta < 1:2288419‑M1/35‑13 (MQ=255) tgtgTTGATTTCCAACGAGTGTaactttgatttat < 1:2031410‑M1/35‑14 (MQ=255) tgtgTTGATTTCCAACGAGTATaactttgatttat < 1:1943036‑M1/35‑14 (MQ=255) tgtgTTGATTTCCAACGAGTATaactttgatttat < 1:1942992‑M1/35‑14 (MQ=255) tgtgTTGATTTCCAACGAGTATaactttgatttat < 1:4813820‑M1/35‑14 (MQ=255) tgtgTTGATTTCCAACGAGTATaactttgatttat < 1:1519044‑M1/35‑14 (MQ=255) gtgtTGATTTCCAACGAGTATaactttgatttata < 1:3472510‑M1/35‑15 (MQ=255) gtgtTGATTTCCAACGAGTATaactttgatttata < 1:701301‑M1/35‑15 (MQ=255) gtgtTGATTTCCAACGAGTATaactttgatttata < 1:2804961‑M1/35‑15 (MQ=255) gtgtTGATTTCCAACGAGTATaactttgatttata < 1:1252242‑M1/35‑15 (MQ=255) gtgtTGATTTCCAACGAGTATaactttgatttata < 1:3325139‑M1/35‑15 (MQ=255) tgtTGATTTCCAACGAGTATaactttgatttatag > 1:5453091‑M1/1‑20 (MQ=255) tgtTGATTTCCAACGAGTATaactttgatttatag > 1:123783‑M1/1‑20 (MQ=255) tgtTGATTTCCAACGAGTATaactttgatttatag < 1:4634182‑M1/35‑16 (MQ=255) tgtTGATTTCCAACGAGTATaactttgatttatag < 1:1268314‑M1/35‑16 (MQ=255) gtTGATTTCCAACGAGTATaactttgatttatagc > 1:6398266‑M1/1‑19 (MQ=255) ttGATTTCCAACGAGTATaactttgatttatagtc > 1:829686‑M1/1‑18 (MQ=255) ttGATTTCCAACGAGTATaactttgatttatagtc > 1:2119635‑M1/1‑18 (MQ=255) ttGATTTCCAACGAGTATaactttgatttatagtc > 1:2368303‑M1/1‑18 (MQ=255) ttGATTTCCAACGAGTATaactttgatttatagtc < 1:753642‑M1/35‑18 (MQ=255) ttGATTTCCAACGAGTATaactttgatttatagtc > 1:2927090‑M1/1‑18 (MQ=255) gATTTCCAACGAGTATaactttgatttatagtcag > 1:4203730‑M1/1‑16 (MQ=255) gATTTCCAACGAGTATaactttgatttatagtcag > 1:5496023‑M1/1‑16 (MQ=255) aTTTCCAACGAGTATaactttgatttatagtcagg > 1:6464027‑M1/1‑15 (MQ=255) aTTTCCAACGAGTATaactttgatttatagtcagg > 1:6391391‑M1/1‑15 (MQ=255) tCCAACGAGTATaactttgatttatagtcaggtgg > 1:709233‑M1/1‑12 (MQ=255) cAACGAGTATaactttgatttatagtcaggtgggg > 1:5254456‑M1/1‑10 (MQ=255) aaCGAGTATaactttgatttatagtcaggtggggc > 1:1646513‑M1/1‑9 (MQ=255) aaCGAGTATaactttgatttatagtcaggtggggc < 1:286642‑M1/35‑27 (MQ=255) aCGAGTATaactttgatttatagtcaggtggggct > 1:5291507‑M1/1‑8 (MQ=255) aCGAGTATaactttgatttatagtcaggtggggct < 1:7508697‑M1/35‑28 (MQ=255) aCGAGTATaactttgatttatagtcaggtggggct < 1:1203909‑M1/35‑28 (MQ=255) aCGAGTATaactttgatttatagtcaggtggggct > 1:5620540‑M1/1‑8 (MQ=255) cGAGTATaactttgatttatagtcaggtggggctt > 1:3404942‑M1/1‑7 (MQ=255) cGAGTATaactttgatttatagtcaggtggggctt > 1:47347‑M1/1‑7 (MQ=255) cGAGTATaactttgatttatagtcaggtggggctt > 1:3869798‑M1/1‑7 (MQ=255) gAGTATaactttgatttatagtcaggtggggcttt < 1:7650784‑M1/35‑30 (MQ=255) gAGTATaactttgatttatagtcaggtggggcttt < 1:1401057‑M1/35‑30 (MQ=255) gAGTATaactttgatttatagtcaggtggggcttt < 1:2682189‑M1/35‑30 (MQ=255) gAGTATaactttgatttatagtcaggtggggcttt < 1:3681736‑M1/35‑30 (MQ=255) aGTATaactttgatttatagtcaggtggggctttt > 1:822943‑M1/1‑5 (MQ=255) aGTATaactttgatttatagtcaggtggggctttt > 1:2304342‑M1/1‑5 (MQ=255) gTATaactttgatttatagtcaggtggggcttttc > 1:5842753‑M1/1‑4 (MQ=255) gTATaactttgatttatagtcaggtggggcttttc < 1:5769494‑M1/35‑32 (MQ=255) gTATaactttgatttatagtcaggtggggcttttc < 1:5387027‑M1/35‑32 (MQ=255) gTATaactttgatttatagtcaggtggggcttttc > 1:2432812‑M1/1‑4 (MQ=255) gTATaactttgatttatagtcaggtggggcttttc > 1:6831000‑M1/1‑4 (MQ=255) gTATaactttgatttatagtcaggtggggcttttc > 1:3768612‑M1/1‑4 (MQ=255) tataactttgatttatagtcaggtggggcttttct > 1:274294‑M1/1‑3 (MQ=255) ataactttgatttatagtcaggtggggcttttctc > 1:4407293‑M1/1‑2 (MQ=255) ataactttgatttatagtcaggtggggcttttctc > 1:6547392‑M1/1‑2 (MQ=255) ataactttgatttatagtcaggtggggcttttctc > 1:5355545‑M1/1‑2 (MQ=255) ataactttgatttatagtcaggtggggcttttctc > 1:5355516‑M1/1‑2 (MQ=255) ataactttgatttatagtcaggtggggcttttctc > 1:1001608‑M1/1‑2 (MQ=255) ataactttgatttatagtcaggtggggcttttctc > 1:2010864‑M1/1‑2 (MQ=255) taactttgatttatagtcaggtggggcttttctct > 1:6443903‑M1/1‑1 (MQ=255) taactttgatttatagtcaggtggggcttttctct > 1:2159572‑M1/1‑1 (MQ=255) taactttgatttatagtcaggtggggcttttctct > 1:1968837‑M1/1‑1 (MQ=255) taactttgatttatagtcaggtggggcttttctct > 1:1645727‑M1/1‑1 (MQ=255) taactttgatttatagtcaggtggggcttttctct > 1:1065889‑M1/1‑1 (MQ=255) | ATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGA > NC_000913/3720599‑3720667 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |