| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,651,293 | Δ2,422 bp | [yhiS]–yhiS | [yhiS], insH‑11, yhiS | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3651293 | 3653714 | 2422 | 140 [0] | [0] 139 | [yhiS]–yhiS | [yhiS],insH‑11,yhiS |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3651292 | 0 (0.000) | 131 (1.200) | 68/94 | 0.0 | 100% | pseudogene (2/746 nt) | yhiS | putative uncharacterized protein YhiS |
| ? | NC_000913 | 3653715 = | 0 (0.000) | intergenic (+2/‑246) | yhiS/slp | putative uncharacterized protein YhiS/starvation lipoprotein | |||||
Only 100 of 145 total aligned reads displayed.
ATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651242‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > NC_000913/3653715‑3653763 ATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTA > 1:753636/1‑50 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT < 1:3898231/50‑1 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTA < 1:379889/49‑1 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTA > 1:3954941/1‑49 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATAT > 1:1372330/1‑50 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATAT < 1:3925188/50‑1 AATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT > 1:4351729/1‑50 AATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT > 1:3665394/1‑50 AATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT > 1:705874/1‑50 AATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT < 1:8131025/50‑1 TTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGA < 1:4050815/50‑1 TTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGA < 1:4636141/50‑1 TTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGA < 1:5708577/50‑1 TTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGA > 1:7991025/1‑50 TTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGA < 1:2670578/50‑1 TTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT > 1:3553878/1‑50 AAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATT < 1:5002874/49‑1 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT < 1:8475699/50‑1 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT > 1:3283425/1‑50 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTA < 1:3538174/49‑1 ACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATT < 1:7832329/50‑1 CATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTA < 1:2050326/50‑1 ATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAG > 1:7640711/1‑50 ATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAG < 1:7500952/50‑1 ATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAG > 1:3021294/1‑50 ATCTGAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAG < 1:5716881/50‑1 TCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAG > 1:1558108/1‑49 TCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAG > 1:2331080/1‑49 CTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCA > 1:1998801/1‑50 TAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACT > 1:3116588/1‑50 TAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACT > 1:8141271/1‑50 TAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACT > 1:7070855/1‑50 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACT < 1:7718566/49‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCA < 1:2133409/47‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTT < 1:4698833/50‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTT > 1:776340/1‑49 CATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA < 1:5281933/50‑1 ATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTAT < 1:2665553/50‑1 TAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATA < 1:2833987/50‑1 TAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATA < 1:8261487/50‑1 TAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATA < 1:6675044/50‑1 AAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAA > 1:921456/1‑50 AAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAA > 1:6147339/1‑50 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT < 1:4149937/50‑1 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT < 1:5754453/50‑1 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT < 1:7317376/50‑1 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT > 1:1373650/1‑50 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT > 1:5140906/1‑50 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT > 1:909831/1‑50 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT > 1:2252704/1‑50 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT > 1:1983494/1‑50 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT < 1:4337330/50‑1 AAACAAATGATGAATAAGGAAATTTATATTGATTATTAGCACTTTATAA < 1:7469275/49‑1 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCA > 1:8219283/1‑50 CAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCAT < 1:1773704/50‑1 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT < 1:3715348/50‑1 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT < 1:5951925/50‑1 AATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT > 1:7632974/1‑49 AATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT > 1:3153389/1‑49 AATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT > 1:2433461/1‑49 ATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGA < 1:5345753/50‑1 TGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA < 1:5401565/50‑1 TGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA < 1:7401516/50‑1 GATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA > 1:5894537/1‑49 GATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA > 1:1186656/1‑49 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA < 1:7207853/50‑1 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA < 1:2004147/50‑1 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAAT < 1:7160844/49‑1 TGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAA < 1:232512/50‑1 TGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAA < 1:2296159/50‑1 TGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA > 1:3508864/1‑49 AATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAA < 1:3016804/50‑1 AATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAA < 1:5459896/49‑1 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAAT < 1:6675090/50‑1 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:2761976/1‑49 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATA < 1:8582408/49‑1 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATA < 1:6458219/49‑1 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:5410945/1‑47 GGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGA < 1:7900846/50‑1 GAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGAT < 1:1812686/50‑1 GAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGAT < 1:2229193/50‑1 AATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATT < 1:6964903/50‑1 AATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATT < 1:7526079/50‑1 ATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT < 1:7538943/50‑1 ATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT < 1:1460275/50‑1 ATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT < 1:2143329/50‑1 ATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT < 1:5986971/50‑1 TTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTT < 1:5265366/50‑1 TTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTT < 1:2933729/50‑1 TTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT > 1:5526421/1‑49 TTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT > 1:6374364/1‑49 TTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTAT > 1:3976240/1‑50 TTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTA < 1:6035261/49‑1 TATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG > 1:5363594/1‑50 TATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG > 1:2284122/1‑50 TATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG > 1:2406733/1‑50 ATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG < 1:3761291/49‑1 ATATTGATTATTAGCACTTTATAATCATCGAATAAAAATAGATTTTATG < 1:209298/49‑1 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA < 1:4489399/50‑1 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGT < 1:6767561/49‑1 ATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651242‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > NC_000913/3653715‑3653763 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |