| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,651,293 | Δ2,422 bp | [yhiS]–yhiS | [yhiS], insH‑11, yhiS | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3651293 | 3653714 | 2422 | 140 [0] | [0] 139 | [yhiS]–yhiS | [yhiS],insH‑11,yhiS |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3651292 | 0 (0.000) | 131 (1.200) | 68/94 | 0.0 | 100% | pseudogene (2/746 nt) | yhiS | putative uncharacterized protein YhiS |
| ? | NC_000913 | 3653715 = | 0 (0.000) | intergenic (+2/‑246) | yhiS/slp | putative uncharacterized protein YhiS/starvation lipoprotein | |||||
Only 100 of 140 total aligned reads displayed.
TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATGTCAATTGACTTTACCCCAGGTATAATAAATACATATCACGGCGATATT > NC_000913/3651243‑3651341 | tCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT < 1:3898231‑M1/50‑1 (MQ=255) cAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATat > 1:1372330‑M1/1‑48 (MQ=255) cAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATat > 1:8012860‑M1/1‑48 (MQ=255) aaTTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATatt < 1:8131025‑M1/50‑4 (MQ=255) aaTTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATatt > 1:705874‑M1/1‑47 (MQ=255) aTTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATatt > 1:2769268‑M1/1‑46 (MQ=255) tttAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattga < 1:5984315‑M1/50‑6 (MQ=255) tttAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattga > 1:7991025‑M1/1‑45 (MQ=255) tttAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattga < 1:4050815‑M1/50‑6 (MQ=255) tttAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattga < 1:2109158‑M1/50‑6 (MQ=255) tttAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattga < 1:4636141‑M1/50‑6 (MQ=255) ttAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattgat > 1:3553878‑M1/1‑44 (MQ=255) aaaCATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattgatt < 1:5002874‑M1/49‑8 (MQ=255) aaCATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattgattat < 1:8475699‑M1/50‑10 (MQ=255) aaCATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattgattat < 1:7810237‑M1/50‑10 (MQ=255) aaCATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattgattat > 1:3283425‑M1/1‑41 (MQ=255) aCATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattgattatt < 1:7832329‑M1/50‑11 (MQ=255) aCATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattgattatt < 1:3089324‑M1/50‑11 (MQ=255) cATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattgattat > 1:4040643‑M1/1‑39 (MQ=255) aTCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattgattattag < 1:7500952‑M1/50‑13 (MQ=255) aTCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattgattattag > 1:7640711‑M1/1‑38 (MQ=255) aTCTGAGCATAAAACAAATGATGAATAAGGAATTTTATattgattattag < 1:5716881‑M1/50‑13 (MQ=255) tCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattgattattag > 1:1558108‑M1/1‑37 (MQ=255) tCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattgattattag > 1:2331080‑M1/1‑37 (MQ=255) cTTAGCATAAAACAAATGATGAATAAGGAATTTTATattgattattagca > 1:1998801‑M1/1‑36 (MQ=255) ttAGCATAAAACAAATGATGAATAAGGAATTTTATattgattattagcac > 1:8211396‑M1/1‑35 (MQ=255) tAGCATAAAACAAATGATGAATAAGGAATTTTATattgattattagcact > 1:3116588‑M1/1‑34 (MQ=255) aGCATAAAACAAATGATGAATAAGGAATTTTATattgattattagcact < 1:7718566‑M1/49‑17 (MQ=255) aGCATAAAACAAATGATGAATAAGGAATTTTATattgattattagca < 1:2133409‑M1/47‑15 (MQ=255) gCATAAAACAAATGATGAATAAGGAATTTTATattgattattagcacttt < 1:4698833‑M1/50‑19 (MQ=255) gCATAAAACAAATGATGAATAAGGAATTTTATattgattattagcacttt < 1:3549350‑M1/50‑19 (MQ=255) gCATAAAACAAATGATGAATAAGGAATTTTATattgattattagcacttt < 1:3904744‑M1/50‑19 (MQ=255) cATAAAACAAATGATGAATAAGGAATTTTATattgattattagcacttta < 1:5281933‑M1/50‑20 (MQ=255) aTAAAACAAATGATGAATAAGGAATTTTATattgattattagcactttat < 1:2665553‑M1/50‑21 (MQ=255) aTAAAACAAATGATGAATAAGGAATTTTATattgattattagcactttat < 1:5418731‑M1/50‑21 (MQ=255) aTAAAACAAATGATGAATAAGGAATTTTATattgattattagcacttta > 1:2261438‑M1/1‑30 (MQ=255) tAAAACAAATGATGAATAAGGAATTTTATattgattattagcactttat > 1:6439945‑M1/1‑29 (MQ=255) aaaaCAAATGATGAATAAGGAATTTTATattgattattagcactttataa > 1:6147339‑M1/1‑28 (MQ=255) aaaaCAAATGATGAATAAGGAATTTTATattgattattagcactttataa > 1:921456‑M1/1‑28 (MQ=255) aaaCAAATGATGAATAAGGAATTTTATattgattattagcactttataat < 1:7317376‑M1/50‑24 (MQ=255) aaaCAAATGATGAATAAGGAATTTTATattgattattagcactttataat < 1:5754453‑M1/50‑24 (MQ=255) aaaCAAATGATGAATAAGGAATTTTATattgattattagcactttataat > 1:909831‑M1/1‑27 (MQ=255) aaaCAAATGATGAATAAGGAATTTTATattgattattagcactttataat < 1:5159722‑M1/50‑24 (MQ=255) aaaCAAATGATGAATAAGGAATTTTATattgattattagcactttataat < 1:4337330‑M1/50‑24 (MQ=255) aaaCAAATGATGAATAAGGAATTTTATattgattattagcactttataat > 1:1373650‑M1/1‑27 (MQ=255) aaaCAAATGATGAATAAGGAAATTTATattgattattagcactttataa < 1:7469275‑M1/49‑23 (MQ=255) aaCAAATGATGAATAAGGAATTTTATattgattattagcactttataatc < 1:7643701‑M1/50‑25 (MQ=255) aCAAATGATGAATAAGGAATTTTATattgattattagcactttataatca < 1:2980420‑M1/50‑26 (MQ=255) aCAAATGATGAATAAGGAATTTTATattgattattagcactttataatca > 1:8219283‑M1/1‑25 (MQ=255) cAAATGATGAATAAGGAATTTTATattgattattagcactttataatcat < 1:3291056‑M1/50‑27 (MQ=255) cAAATGATGAATAAGGAATTTTATattgattattagcactttataatcat < 1:1773704‑M1/50‑27 (MQ=255) aaaTGATGAATAAGGAATTTTATattgattattagcactttataatcatt < 1:5951925‑M1/50‑28 (MQ=255) aaaTGATGAATAAGGAATTTTATattgattattagcactttataatcatt > 1:8342314‑M1/1‑23 (MQ=255) aaaTGATGAATAAGGAATTTTATattgattattagcactttataatcatt < 1:3715348‑M1/50‑28 (MQ=255) aaTGATGAATAAGGAATTTTATattgattattagcactttataatcatt > 1:2433461‑M1/1‑22 (MQ=255) atgatgAATAAGGAATTTTATattgattattagcactttataatcattga < 1:5345753‑M1/50‑30 (MQ=255) tgatgaATAAGGAATTTTATattgattattagcactttataatcattgaa < 1:7401516‑M1/50‑31 (MQ=255) tgatgaATAAGGAATTTTATattgattattagcactttataatcattgaa < 1:5401565‑M1/50‑31 (MQ=255) gatgaATAAGGAATTTTATattgattattagcactttataatcattgaa > 1:1186656‑M1/1‑19 (MQ=255) atgaATAAGGAATTTTATattgattattagcactttataatcattgaata < 1:2004147‑M1/50‑33 (MQ=255) atgaATAAGGAATTTTATattgattattagcactttataatcattgaata < 1:5782481‑M1/50‑33 (MQ=255) atgaATAAGGAATTTTATattgattattagcactttataatcattgaata < 1:7207853‑M1/50‑33 (MQ=255) atgaATAAGGAATTTTATattgattattagcactttataatcattgaat < 1:7160844‑M1/49‑32 (MQ=255) tgaATAAGGAATTTTATattgattattagcactttataatcattgaataa < 1:232512‑M1/50‑34 (MQ=255) tgaATAAGGAATTTTATattgattattagcactttataatcattgaataa < 1:7082708‑M1/50‑34 (MQ=255) tgaATAAGGAATTTTATattgattattagcactttataatcattgaataa < 1:2296159‑M1/50‑34 (MQ=255) tgaATAAGGAATTTTATattgattattagcactttataatcattgaata > 1:3508864‑M1/1‑17 (MQ=255) aaTAAGGAATTTTATattgattattagcactttataatcattgaataaaa < 1:3016804‑M1/50‑36 (MQ=255) tAAGGAATTTTATattgattattagcactttataatcattgaataaaaat < 1:216822‑M1/50‑38 (MQ=255) tAAGGAATTTTATattgattattagcactttataatcattgaataaaaat < 1:6675090‑M1/50‑38 (MQ=255) tAAGGAATTTTATattgattattagcactttataatcattgaataaaaa > 1:2761976‑M1/1‑13 (MQ=255) aaGGAATTTTATattgattattagcactttataatcattgaataaaaa > 1:4280350‑M1/1‑12 (MQ=255) aGGAATTTTATattgattattagcactttataatcattgaataaaaata < 1:8582408‑M1/49‑39 (MQ=255) aGGAATTTTATattgattattagcactttataatcattgaataaaaata < 1:6458219‑M1/49‑39 (MQ=255) aGGAATTTTATattgattattagcactttataatcattgaataaaaata < 1:4427373‑M1/49‑39 (MQ=255) aGGAATTTTATattgattattagcactttataatcattgaataaaaa > 1:5410945‑M1/1‑11 (MQ=255) aGGAATTTTATattgattattagcactttataatcattgaataaaaa > 1:562334‑M1/1‑11 (MQ=255) ggAATTTTATattgattattagcactttataatcattgaataaaaa > 1:6682490‑M1/1‑10 (MQ=255) gAATTTTATattgattattagcactttataatcattgaataaaaatagat < 1:1812686‑M1/50‑42 (MQ=255) gAATTTTATattgattattagcactttataatcattgaataaaaatagat < 1:2229193‑M1/50‑42 (MQ=255) aaTTTTATattgattattagcactttataatcattgaataaaaatagatt < 1:7526079‑M1/50‑43 (MQ=255) aTTTTATattgattattagcactttataatcattgaataaaaatagattt < 1:1460275‑M1/50‑44 (MQ=255) aTTTTATattgattattagcactttataatcattgaataaaaatagattt < 1:7538943‑M1/50‑44 (MQ=255) ttttATattgattattagcactttataatcattgaataaaaatagatttt < 1:5265366‑M1/50‑45 (MQ=255) ttttATattgattattagcactttataatcattgaataaaaatagatttt < 1:2933729‑M1/50‑45 (MQ=255) ttttATattgattattagcactttataatcattgaataaaaatagatttt < 1:7601824‑M1/50‑45 (MQ=255) ttttATattgattattagcactttataatcattgaataaaaatagattt > 1:5526421‑M1/1‑6 (MQ=255) ttATattgattattagcactttataatcattgaataaaaatagattttat > 1:3976240‑M1/1‑4 (MQ=255) ttATattgattattagcactttataatcattgaataaaaatagatttta < 1:6035261‑M1/49‑46 (MQ=255) tatattgattattagcactttataatcattgaataaaaatagattttatg > 1:2284122‑M1/1‑3 (MQ=255) tatattgattattagcactttataatcattgaataaaaatagattttatg > 1:2406733‑M1/1‑3 (MQ=255) tatattgattattagcactttataatcattgaataaaaatagattttatg > 1:5363594‑M1/1‑3 (MQ=255) atattgattattagcactttataatcattgaataaaaatagattttatg < 1:1884035‑M1/49‑48 (MQ=255) atattgattattagcactttataatcattgaataaaaatagattttatg > 1:6039482‑M1/1‑2 (MQ=255) atattgattattagcactttataatcattgaataaaaatagattttatg < 1:3761291‑M1/49‑48 (MQ=255) atattgattattagcactttataatcatcgaataaaaatagattttatg < 1:209298‑M1/49‑48 (MQ=255) tattgattattagcactttataatcattgaataaaaatagattttatgta < 1:4489399‑M1/50‑50 (MQ=255) tattgattattagcactttataatcattgaataaaaatagattttatgta < 1:6973100‑M1/50‑50 (MQ=255) tattgattattagcactttataatcattgaataaaaatagattttatgt < 1:6767561‑M1/49‑49 (MQ=255) tattgattattagcactttataatcattgaataaaaatagattttatgt < 1:3697431‑M1/49‑49 (MQ=255) | TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATGTCAATTGACTTTACCCCAGGTATAATAAATACATATCACGGCGATATT > NC_000913/3651243‑3651341 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |