| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,651,293 | Δ2,422 bp | [yhiS]–yhiS | [yhiS], insH‑11, yhiS | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3651293 | 3653714 | 2422 | 197 [0] | [0] 197 | [yhiS]–yhiS | [yhiS],insH‑11,yhiS |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3651292 | 0 (0.000) | 189 (1.320) | 77/94 | 0.0 | 100% | pseudogene (2/746 nt) | yhiS | putative uncharacterized protein YhiS |
| ? | NC_000913 | 3653715 = | 0 (0.000) | intergenic (+2/‑246) | yhiS/slp | putative uncharacterized protein YhiS/starvation lipoprotein | |||||
Only 100 of 199 total aligned reads displayed.
TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651243‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > NC_000913/3653715‑3653763 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTA > 1:4378385/1‑49 CCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATA > 1:2579491/1‑50 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATAT > 2:4075189/1‑50 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATAT < 2:3259967/50‑1 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATAT < 1:5638705/50‑1 AATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT < 1:424773/50‑1 AATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT > 2:1853279/1‑50 AATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT < 1:5070541/50‑1 ATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTG < 1:2279899/50‑1 ATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTG < 2:2206598/50‑1 TTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGA < 1:1191459/50‑1 TAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT > 1:3584293/1‑49 TAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT > 1:1444211/1‑49 TAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT < 2:893634/49‑1 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT > 2:2763805/1‑50 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTA < 1:4776143/49‑1 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTA < 1:4731355/49‑1 ACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATT < 1:4554228/50‑1 ACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATT < 2:534826/50‑1 ACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATT < 1:1004734/50‑1 ACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATT < 1:2535705/50‑1 ACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT > 2:3067183/1‑49 CATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTA < 2:718064/50‑1 CATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTA < 2:1272781/50‑1 CATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTA < 1:3948478/50‑1 CATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT > 1:2803710/1‑48 ATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAG > 1:2359283/1‑50 ATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAG > 1:4500593/1‑50 CTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCA > 2:4148730/1‑50 TTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCAC > 1:757890/1‑50 TTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCAC > 1:532364/1‑50 TTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCAC > 1:1637120/1‑50 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACT < 2:4582751/49‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACT < 1:820160/49‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCA < 2:3713854/47‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCA < 1:1807631/47‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCA < 1:3463468/47‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGC < 2:3379293/46‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTT < 2:4368295/50‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTT > 2:4540380/1‑49 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTT > 2:5115170/1‑49 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTT < 2:836674/49‑1 GCAGAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTT < 2:213970/50‑1 CATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA < 2:5662910/50‑1 ATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTAT < 1:5247754/50‑1 TAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTAT > 2:4742782/1‑49 AAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAA > 2:318826/1‑50 AAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAA > 1:3151633/1‑50 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT < 2:2858407/50‑1 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAA < 1:1003977/49‑1 AACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATC < 2:2505401/50‑1 AACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATC < 2:112988/50‑1 AACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATC < 2:4499267/50‑1 AACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT > 2:2260989/1‑49 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCA < 2:2568189/50‑1 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCA > 1:1377462/1‑50 CAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCAT > 2:4017885/1‑50 CAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCAT < 1:4127753/50‑1 CAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCAT > 2:2431213/1‑50 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT < 1:3852918/50‑1 AATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTG < 1:293259/50‑1 AATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTG < 2:4879901/50‑1 AATCATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT > 1:168881/1‑49 ATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGA < 2:2988436/50‑1 ATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTG > 1:2593878/1‑49 TGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA > 1:517344/1‑50 TGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA > 2:2270819/1‑50 TGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA < 1:3704286/50‑1 GATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA > 1:2116677/1‑49 GATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA > 2:647384/1‑49 GATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA > 2:247626/1‑49 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA < 1:3095548/50‑1 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA < 1:3414882/50‑1 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA < 1:1854247/50‑1 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA < 1:878234/50‑1 TGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA > 1:3989125/1‑49 GAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAA > 2:5469754/1‑49 AATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAA < 1:4446031/50‑1 ATAAGTAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA < 2:4950335/50‑1 ATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA < 2:5221591/50‑1 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAAT < 2:446265/50‑1 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:5528183/1‑49 GGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 2:394230/1‑46 GAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGAT > 1:5224535/1‑50 GAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGAT < 2:1051438/50‑1 GAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGAT > 1:3003267/1‑50 AATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATT < 2:4774178/50‑1 ATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT < 1:662486/50‑1 ATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT > 1:3810648/1‑50 TTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTT < 1:124531/50‑1 TTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT > 1:4078359/1‑49 TTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTA > 1:3788901/1‑50 TTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTA > 2:1007961/1‑50 TTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTA > 2:1675851/1‑50 TATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG > 1:4865536/1‑50 ATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG < 2:1158299/49‑1 ATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG > 1:2183279/1‑49 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA < 2:4125360/50‑1 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGT < 2:1632282/49‑1 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGT < 2:2324313/49‑1 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651243‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > NC_000913/3653715‑3653763 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |