Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
MC JC | NC_000913 | 3,651,293 | Δ2,422 bp | [yhiS]–yhiS | [yhiS], insH‑11, yhiS |
Missing coverage evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | NC_000913 | 3651293 | 3653714 | 2422 | 197 [0] | [0] 197 | [yhiS]–yhiS | [yhiS],insH‑11,yhiS |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 3651292 | 0 (0.000) | 189 (1.320) | 77/94 | 0.0 | 100% | pseudogene (2/746 nt) | yhiS | putative uncharacterized protein YhiS |
? | NC_000913 | 3653715 = | 0 (0.000) | intergenic (+2/‑246) | yhiS/slp | putative uncharacterized protein YhiS/starvation lipoprotein |
Only 100 of 197 total aligned reads displayed.
CCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATGTCAATTGACTTTACCCCAGGTATAATAAATACATATCACGGCGATATT > NC_000913/3651244‑3651341 | ccAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATa > 1:2579491‑M1/1‑49 (MQ=255) cAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATat > 2:4075189‑M1/1‑48 (MQ=255) cAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATat < 2:3259967‑M1/50‑3 (MQ=255) cAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATat < 2:229122‑M1/50‑3 (MQ=255) cAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATat > 2:2195300‑M1/1‑48 (MQ=255) aaTTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATatt < 1:424773‑M1/50‑4 (MQ=255) aTTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattg < 1:2279899‑M1/50‑5 (MQ=255) tttAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattga < 1:1191459‑M1/50‑6 (MQ=255) tttAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattga > 2:1150101‑M1/1‑45 (MQ=255) tAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattgat > 1:3584293‑M1/1‑43 (MQ=255) tAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattgat > 1:1444211‑M1/1‑43 (MQ=255) tAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattgat < 2:893634‑M1/49‑7 (MQ=255) aaCATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattgattat > 2:2763805‑M1/1‑41 (MQ=255) aaCATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattgattat < 2:1093295‑M1/50‑10 (MQ=255) aaCATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattgattat < 1:72279‑M1/50‑10 (MQ=255) aaCATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattgatta < 1:4776143‑M1/49‑9 (MQ=255) aaCATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattgatta < 1:4731355‑M1/49‑9 (MQ=255) aCATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattgattatt < 2:534826‑M1/50‑11 (MQ=255) aCATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattgattatt < 1:4554228‑M1/50‑11 (MQ=255) aCATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattgattatt < 1:1004734‑M1/50‑11 (MQ=255) aCATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattgattatt < 1:2535705‑M1/50‑11 (MQ=255) aCATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattgattat > 2:3067183‑M1/1‑40 (MQ=255) cATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattgattatta < 2:2498777‑M1/50‑12 (MQ=255) cATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattgattatta < 2:718064‑M1/50‑12 (MQ=255) cATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattgattatta < 1:3948478‑M1/50‑12 (MQ=255) cATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattgattat > 1:2803710‑M1/1‑39 (MQ=255) aTCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattgattattag > 1:4500593‑M1/1‑38 (MQ=255) aTCTTAGCATAAAACAAATGATGAATAAGGAATTTTATattgattattag > 1:2359283‑M1/1‑38 (MQ=255) cTTAGCATAAAACAAATGATGAATAAGGAATTTTATattgattattagca > 2:4148730‑M1/1‑36 (MQ=255) ttAGCATAAAACAAATGATGAATAAGGAATTTTATattgattattagcac > 1:1637120‑M1/1‑35 (MQ=255) aGCATAAAACAAATGATGAATAAGGAATTTTATattgattattagcactt > 1:4984910‑M1/1‑33 (MQ=255) aGCATAAAACAAATGATGAATAAGGAATTTTATattgattattagcact < 2:4582751‑M1/49‑17 (MQ=255) aGCATAAAACAAATGATGAATAAGGAATTTTATattgattattagca < 2:2254172‑M1/47‑15 (MQ=255) aGCATAAAACAAATGATGAATAAGGAATTTTATattgattattagca < 2:3713854‑M1/47‑15 (MQ=255) aGCATAAAACAAATGATGAATAAGGAATTTTATattgattattagca < 1:3463468‑M1/47‑15 (MQ=255) aGCATAAAACAAATGATGAATAAGGAATTTTATattgattattagca < 1:1807631‑M1/47‑15 (MQ=255) aGCATAAAACAAATGATGAATAAGGAATTTTATattgattattagc < 2:3379293‑M1/46‑14 (MQ=255) gCATAAAACAAATGATGAATAAGGAATTTTATattgattattagcacttt < 2:4368295‑M1/50‑19 (MQ=255) gCATAAAACAAATGATGAATAAGGAATTTTATattgattattagcactt > 2:4540380‑M1/1‑32 (MQ=255) gCATAAAACAAATGATGAATAAGGAATTTTATattgattattagcactt > 2:5115170‑M1/1‑32 (MQ=255) gCATAAAACAAATGATGAATAAGGAATTTTATattgattattagcactt < 2:836674‑M1/49‑18 (MQ=255) gCATAAAACAAATGATGAATAAGGAATTTTATattgattattagcactt < 2:1665193‑M1/49‑18 (MQ=255) cATAAAACAAATGATGAATAAGGAATTTTATattgattattagcacttta < 2:5662910‑M1/50‑20 (MQ=255) cATAAAACAAATGATGAATAAGGAATTTTATattgattattagcacttta < 2:2445722‑M1/50‑20 (MQ=255) aTAAAACAAATGATGAATAAGGAATTTTATattgattattagcactttat < 2:2425711‑M1/50‑21 (MQ=255) aTAAAACAAATGATGAATAAGGAATTTTATattgattattagcacttta > 1:5230486‑M1/1‑30 (MQ=255) tAAAACAAATGATGAATAAGGAATTTTATattgattattagcactttat > 2:4742782‑M1/1‑29 (MQ=255) aaaaCAAATGATGAATAAGGAATTTTATattgattattagcactttataa > 2:1036746‑M1/1‑28 (MQ=255) aaaaCAAATGATGAATAAGGAATTTTATattgattattagcactttataa > 2:318826‑M1/1‑28 (MQ=255) aaaaCAAATGATGAATAAGGAATTTTATattgattattagcactttataa > 1:3151633‑M1/1‑28 (MQ=255) aaaCAAATGATGAATAAGGAATTTTATattgattattagcactttataat < 2:2858407‑M1/50‑24 (MQ=255) aaaCAAATGATGAATAAGGAATTTTATattgattattagcactttataa < 2:2051102‑M1/49‑23 (MQ=255) aaaCAAATGATGAATAAGGAATTTTATattgattattagcactttataa < 1:1003977‑M1/49‑23 (MQ=255) aaCAAATGATGAATAAGGAATTTTATattgattattagcactttataatc < 2:2505401‑M1/50‑25 (MQ=255) aaCAAATGATGAATAAGGAATTTTATattgattattagcactttataatc < 2:4499267‑M1/50‑25 (MQ=255) aCAAATGATGAATAAGGAATTTTATattgattattagcactttataatca < 2:2568189‑M1/50‑26 (MQ=255) aCAAATGATGAATAAGGAATTTTATattgattattagcactttataatca < 1:967432‑M1/50‑26 (MQ=255) aCAAATGATGAATAAGGAATTTTATattgattattagcactttataatca > 1:1377462‑M1/1‑25 (MQ=255) cAAATGATGAATAAGGAATTTTATattgattattagcactttataatcat < 1:870831‑M1/50‑27 (MQ=255) cAAATGATGAATAAGGAATTTTATattgattattagcactttataatcat < 1:4127753‑M1/50‑27 (MQ=255) cAAATGATGAATAAGGAATTTTATattgattattagcactttataatcat > 2:4017885‑M1/1‑24 (MQ=255) aaaTGATGAATAAGGAATTTTATattgattattagcactttataatcatt < 1:3852918‑M1/50‑28 (MQ=255) aaTGATGAATAAGGAATTTTATattgattattagcactttataatcattg < 2:4879901‑M1/50‑29 (MQ=255) aaTGATGAATAAGGAATTTTATattgattattagcactttataatcattg < 1:293259‑M1/50‑29 (MQ=255) aaTCATGAATAAGGAATTTTATattgattattagcactttataatcatt > 1:168881‑M1/1‑22 (MQ=255) atgatgAATAAGGAATTTTATattgattattagcactttataatcattga < 2:2988436‑M1/50‑30 (MQ=255) atgatgAATAAGGAATTTTATattgattattagcactttataatcattg > 1:2593878‑M1/1‑21 (MQ=255) tgatgaATAAGGAATTTTATattgattattagcactttataatcattgaa < 1:3704286‑M1/50‑31 (MQ=255) gatgaATAAGGAATTTTATattgattattagcactttataatcattgaa > 2:647384‑M1/1‑19 (MQ=255) gatgaATAAGGAATTTTATattgattattagcactttataatcattgaa > 1:2116677‑M1/1‑19 (MQ=255) atgaATAAGGAATTTTATattgattattagcactttataatcattgaata < 1:3095548‑M1/50‑33 (MQ=255) atgaATAAGGAATTTTATattgattattagcactttataatcattgaata < 1:3414882‑M1/50‑33 (MQ=255) atgaATAAGGAATTTTATattgattattagcactttataatcattgaata < 1:1854247‑M1/50‑33 (MQ=255) atgaATAAGGAATTTTATattgattattagcactttataatcattgaata < 1:780162‑M1/50‑33 (MQ=255) atgaATAAGGAATTTTATattgattattagcactttataatcattgaat < 1:5295742‑M1/49‑32 (MQ=255) tgaATAAGGAATTTTATattgattattagcactttataatcattgaataa < 1:5202843‑M1/50‑34 (MQ=255) tgaATAAGGAATTTTATattgattattagcactttataatcattgaata > 1:3989125‑M1/1‑17 (MQ=255) gaATAAGGAATTTTATattgattattagcactttataatcattgaataa > 2:5469754‑M1/1‑16 (MQ=255) aaTAAGGAATTTTATattgattattagcactttataatcattgaataaaa < 1:4446031‑M1/50‑36 (MQ=255) aaTAAGGAATTTTATattgattattagcactttataatcattgaataaaa < 1:5412555‑M1/50‑36 (MQ=255) aaTAAGGAATTTTATattgattattagcactttataatcattgaataaa > 2:1529269‑M1/1‑15 (MQ=255) aTAAGTAATTTTATattgattattagcactttataatcattgaataaaaa < 2:4950335‑M1/50‑37 (MQ=255) aTAAGGAATTTTATattgattattagcactttataatcattgaataaaaa < 2:5221591‑M1/50‑37 (MQ=255) tAAGGAATTTTATattgattattagcactttataatcattgaataaaaat < 2:446265‑M1/50‑38 (MQ=255) aGGAATTTTATattgattattagcactttataatcattgaataaaaata < 1:5608098‑M1/49‑39 (MQ=255) aGGAATTTTATattgattattagcactttataatcattgaataaaaata < 1:436652‑M1/49‑39 (MQ=255) ggAATTTTATattgattattagcactttataatcattgaataaaaa > 2:394230‑M1/1‑10 (MQ=255) gAATTTTATattgattattagcactttataatcattgaataaaaatagat > 1:3003267‑M1/1‑9 (MQ=255) gAATTTTATattgattattagcactttataatcattgaataaaaatagat < 1:5152735‑M1/50‑42 (MQ=255) aaTTTTATattgattattagcactttataatcattgaataaaaatagatt < 2:4774178‑M1/50‑43 (MQ=255) aTTTTATattgattattagcactttataatcattgaataaaaatagattt > 1:3810648‑M1/1‑7 (MQ=255) ttttATattgattattagcactttataatcattgaataaaaatagatttt < 1:124531‑M1/50‑45 (MQ=255) ttttATattgattattagcactttataatcattgaataaaaatagattt > 1:4078359‑M1/1‑6 (MQ=255) ttttATattgattattagcactttataatcattgaataaaaatagattt > 1:64109‑M1/1‑6 (MQ=255) tttATattgattattagcactttataatcattgaataaaaatagatttta > 1:3788901‑M1/1‑5 (MQ=255) tatattgattattagcactttataatcattgaataaaaatagattttatg > 2:2266640‑M1/1‑3 (MQ=255) tatattgattattagcactttataatcattgaataaaaatagattttat < 2:126600‑M1/49‑47 (MQ=255) atattgattattagcactttataatcattgaataaaaatagattttatg > 1:2183279‑M1/1‑2 (MQ=255) tattgattattagcactttataatcattgaataaaaatagattttatgta < 2:1827893‑M1/50‑50 (MQ=255) tattgattattagcactttataatcattgaataaaaatagattttatgta < 2:4125360‑M1/50‑50 (MQ=255) | CCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATGTCAATTGACTTTACCCCAGGTATAATAAATACATATCACGGCGATATT > NC_000913/3651244‑3651341 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |