| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,651,293 | Δ2,422 bp | [yhiS]–yhiS | [yhiS], insH‑11, yhiS | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3651293 | 3653714 | 2422 | 197 [0] | [0] 197 | [yhiS]–yhiS | [yhiS],insH‑11,yhiS |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3651292 | 0 (0.000) | 189 (1.320) | 77/94 | 0.0 | 100% | pseudogene (2/746 nt) | yhiS | putative uncharacterized protein YhiS |
| ? | NC_000913 | 3653715 = | 0 (0.000) | intergenic (+2/‑246) | yhiS/slp | putative uncharacterized protein YhiS/starvation lipoprotein | |||||
Only 100 of 197 total aligned reads displayed.
GGTAAAAGAATTCGCTTATCAAATCATTACCAGAATATAATACCATAATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > NC_000913/3653666‑3653763 | ccaatttaaacatcttagcataaaacaaatgatgaataaggaattttata > 1:2579491‑M2/50‑50 (MQ=255) caatttaaacatcttagcataaaacaaatgatgaataaggaattttatat > 2:4075189‑M2/49‑50 (MQ=255) caatttaaacatcttagcataaaacaaatgatgaataaggaattttatat < 2:3259967‑M2/2‑1 (MQ=255) caatttaaacatcttagcataaaacaaatgatgaataaggaattttatat < 2:229122‑M2/2‑1 (MQ=255) caatttaaacatcttagcataaaacaaatgatgaataaggaattttatat > 2:2195300‑M2/49‑50 (MQ=255) aatttaaacatcttagcataaaacaaatgatgaataaggaattttatAtt < 1:424773‑M2/3‑1 (MQ=255) atttaaacatcttagcataaaacaaatgatgaataaggaattttatATTg < 1:2279899‑M2/4‑1 (MQ=255) tttaaacatcttagcataaaacaaatgatgaataaggaattttatATTGa < 1:1191459‑M2/5‑1 (MQ=255) tttaaacatcttagcataaaacaaatgatgaataaggaattttatATTGa > 2:1150101‑M2/46‑50 (MQ=255) taaacatcttagcataaaacaaatgatgaataaggaattttatATTGat > 1:3584293‑M2/44‑49 (MQ=255) taaacatcttagcataaaacaaatgatgaataaggaattttatATTGat > 1:1444211‑M2/44‑49 (MQ=255) taaacatcttagcataaaacaaatgatgaataaggaattttatATTGat < 2:893634‑M2/6‑1 (MQ=255) aacatcttagcataaaacaaatgatgaataaggaattttatATTGattat > 2:2763805‑M2/42‑50 (MQ=255) aacatcttagcataaaacaaatgatgaataaggaattttatATTGattat < 2:1093295‑M2/9‑1 (MQ=255) aacatcttagcataaaacaaatgatgaataaggaattttatATTGattat < 1:72279‑M2/9‑1 (MQ=255) aacatcttagcataaaacaaatgatgaataaggaattttatATTGatta < 1:4776143‑M2/8‑1 (MQ=255) aacatcttagcataaaacaaatgatgaataaggaattttatATTGatta < 1:4731355‑M2/8‑1 (MQ=255) acatcttagcataaaacaaatgatgaataaggaattttatATTGattatt < 2:534826‑M2/10‑1 (MQ=255) acatcttagcataaaacaaatgatgaataaggaattttatATTGattatt < 1:4554228‑M2/10‑1 (MQ=255) acatcttagcataaaacaaatgatgaataaggaattttatATTGattatt < 1:1004734‑M2/10‑1 (MQ=255) acatcttagcataaaacaaatgatgaataaggaattttatATTGattatt < 1:2535705‑M2/10‑1 (MQ=255) acatcttagcataaaacaaatgatgaataaggaattttatATTGattat > 2:3067183‑M2/41‑49 (MQ=255) catcttagcataaaacaaatgatgaataaggaattttatATTGattat > 1:2803710‑M2/40‑48 (MQ=255) catcttagcataaaacaaatgatgaataaggaattttatATTGAttatta < 2:2498777‑M2/11‑1 (MQ=255) catcttagcataaaacaaatgatgaataaggaattttatATTGAttatta < 2:718064‑M2/11‑1 (MQ=255) catcttagcataaaacaaatgatgaataaggaattttatATTGAttatta < 1:3948478‑M2/11‑1 (MQ=255) atcttagcataaaacaaatgatgaataaggaattttatATTGATTATTAg > 1:2359283‑M2/39‑50 (MQ=255) atcttagcataaaacaaatgatgaataaggaattttatATTGATTATTAg > 1:4500593‑M2/39‑50 (MQ=255) cttagcataaaacaaatgatgaataaggaattttatATTGATTATTAGCa > 2:4148730‑M2/37‑50 (MQ=255) ttagcataaaacaaatgatgaataaggaattttatATTGATTATTAGCAc > 1:1637120‑M2/36‑50 (MQ=255) agcataaaacaaatgatgaataaggaattttatATTGATTATTAGc < 2:3379293‑M2/13‑1 (MQ=255) agcataaaacaaatgatgaataaggaattttatATTGATTATTAGCa < 2:2254172‑M2/14‑1 (MQ=255) agcataaaacaaatgatgaataaggaattttatATTGATTATTAGCa < 1:1807631‑M2/14‑1 (MQ=255) agcataaaacaaatgatgaataaggaattttatATTGATTATTAGCa < 2:3713854‑M2/14‑1 (MQ=255) agcataaaacaaatgatgaataaggaattttatATTGATTATTAGCa < 1:3463468‑M2/14‑1 (MQ=255) agcataaaacaaatgatgaataaggaattttatATTGATTATTAGCACtt > 1:4984910‑M2/34‑50 (MQ=255) agcataaaacaaatgatgaataaggaattttatATTGATTATTAGCACt < 2:4582751‑M2/16‑1 (MQ=255) gcataaaacaaatgatgaataaggaattttatATTGATTATTAGCACttt < 2:4368295‑M2/18‑1 (MQ=255) gcataaaacaaatgatgaataaggaattttatATTGATTATTAGCACtt > 2:4540380‑M2/33‑49 (MQ=255) gcataaaacaaatgatgaataaggaattttatATTGATTATTAGCACtt > 2:5115170‑M2/33‑49 (MQ=255) gcataaaacaaatgatgaataaggaattttatATTGATTATTAGCACtt < 2:836674‑M2/17‑1 (MQ=255) gcataaaacaaatgatgaataaggaattttatATTGATTATTAGCACtt < 2:1665193‑M2/17‑1 (MQ=255) cataaaacaaatgatgaataaggaattttatATTGATTATTAGCACTTta < 2:5662910‑M2/19‑1 (MQ=255) cataaaacaaatgatgaataaggaattttatATTGATTATTAGCACTTta < 2:2445722‑M2/19‑1 (MQ=255) ataaaacaaatgatgaataaggaattttatATTGATTATTAGCACTTtat < 2:2425711‑M2/20‑1 (MQ=255) ataaaacaaatgatgaataaggaattttatATTGATTATTAGCACTTta > 1:5230486‑M2/31‑49 (MQ=255) taaaacaaatgatgaataaggaattttatATTGATTATTAGCACTTtat > 2:4742782‑M2/30‑49 (MQ=255) aaaacaaatgatgaataaggaattttatATTGATTATTAGCACTTTATaa > 2:1036746‑M2/29‑50 (MQ=255) aaaacaaatgatgaataaggaattttatATTGATTATTAGCACTTTATaa > 2:318826‑M2/29‑50 (MQ=255) aaaacaaatgatgaataaggaattttatATTGATTATTAGCACTTTATaa > 1:3151633‑M2/29‑50 (MQ=255) aaacaaatgatgaataaggaattttatATTGATTATTAGCACTTTATaa < 2:2051102‑M2/22‑1 (MQ=255) aaacaaatgatgaataaggaattttatATTGATTATTAGCACTTTATaa < 1:1003977‑M2/22‑1 (MQ=255) aaacaaatgatgaataaggaattttatATTGATTATTAGCACTTTATAAt < 2:2858407‑M2/23‑1 (MQ=255) aacaaatgatgaataaggaattttatATTGATTATTAGCACTTTATAATc < 2:2505401‑M2/24‑1 (MQ=255) aacaaatgatgaataaggaattttatATTGATTATTAGCACTTTATAATc < 2:4499267‑M2/24‑1 (MQ=255) acaaatgatgaataaggaattttatATTGATTATTAGCACTTTATAATCa < 1:967432‑M2/25‑1 (MQ=255) acaaatgatgaataaggaattttatATTGATTATTAGCACTTTATAATCa < 2:2568189‑M2/25‑1 (MQ=255) acaaatgatgaataaggaattttatATTGATTATTAGCACTTTATAATCa > 1:1377462‑M2/26‑50 (MQ=255) caaatgatgaataaggaattttatATTGATTATTAGCACTTTATAATCAt < 1:4127753‑M2/26‑1 (MQ=255) caaatgatgaataaggaattttatATTGATTATTAGCACTTTATAATCAt > 2:4017885‑M2/25‑50 (MQ=255) caaatgatgaataaggaattttatATTGATTATTAGCACTTTATAATCAt < 1:870831‑M2/26‑1 (MQ=255) aaatgatgaataaggaattttatATTGATTATTAGCACTTTATAATCAtt < 1:3852918‑M2/27‑1 (MQ=255) aatgatgaataaggaattttatATTGATTATTAGCACTTTATAATCATTg < 2:4879901‑M2/28‑1 (MQ=255) aatgatgaataaggaattttatATTGATTATTAGCACTTTATAATCATTg < 1:293259‑M2/28‑1 (MQ=255) aatcatgaataaggaattttatATTGATTATTAGCACTTTATAATCAtt > 1:168881‑M2/23‑49 (MQ=255) atgatgaataaggaattttatATTGATTATTAGCACTTTATAATCATTg > 1:2593878‑M2/22‑49 (MQ=255) atgatgaataaggaattttatATTGATTATTAGCACTTTATAATCATTGa < 2:2988436‑M2/29‑1 (MQ=255) tgatgaataaggaattttatATTGATTATTAGCACTTTATAATCATTGaa < 1:3704286‑M2/30‑1 (MQ=255) gatgaataaggaattttatATTGATTATTAGCACTTTATAATCATTGaa > 2:647384‑M2/20‑49 (MQ=255) gatgaataaggaattttatATTGATTATTAGCACTTTATAATCATTGaa > 1:2116677‑M2/20‑49 (MQ=255) atgaataaggaattttatATTGATTATTAGCACTTTATAATCATTGAAt < 1:5295742‑M2/31‑1 (MQ=255) atgaataaggaattttatATTGATTATTAGCACTTTATAATCATTGAATa < 1:3095548‑M2/32‑1 (MQ=255) atgaataaggaattttatATTGATTATTAGCACTTTATAATCATTGAATa < 1:3414882‑M2/32‑1 (MQ=255) atgaataaggaattttatATTGATTATTAGCACTTTATAATCATTGAATa < 1:780162‑M2/32‑1 (MQ=255) atgaataaggaattttatATTGATTATTAGCACTTTATAATCATTGAATa < 1:1854247‑M2/32‑1 (MQ=255) tgaataaggaattttatATTGATTATTAGCACTTTATAATCATTGAATaa < 1:5202843‑M2/33‑1 (MQ=255) tgaataaggaattttatATTGATTATTAGCACTTTATAATCATTGAATa > 1:3989125‑M2/18‑49 (MQ=255) gaataaggaattttatATTGATTATTAGCACTTTATAATCATTGAATaa > 2:5469754‑M2/17‑49 (MQ=255) aataaggaattttatATTGATTATTAGCACTTTATAATCATTGAATaaaa < 1:4446031‑M2/35‑1 (MQ=255) aataaggaattttatATTGATTATTAGCACTTTATAATCATTGAATaaaa < 1:5412555‑M2/35‑1 (MQ=255) aataaggaattttatATTGATTATTAGCACTTTATAATCATTGAATaaa > 2:1529269‑M2/16‑49 (MQ=255) ataagtaattttatATTGATTATTAGCACTTTATAATCATTGAATaaaaa < 2:4950335‑M2/36‑1 (MQ=255) ataaggaattttatATTGATTATTAGCACTTTATAATCATTGAATaaaaa < 2:5221591‑M2/36‑1 (MQ=255) taaggaattttatATTGATTATTAGCACTTTATAATCATTGAATAAAAAt < 2:446265‑M2/37‑1 (MQ=255) aggaattttatATTGATTATTAGCACTTTATAATCATTGAATAAAAATa < 1:5608098‑M2/38‑1 (MQ=255) aggaattttatATTGATTATTAGCACTTTATAATCATTGAATAAAAATa < 1:436652‑M2/38‑1 (MQ=255) ggaattttatATTGATTATTAGCACTTTATAATCATTGAATaaaaa > 2:394230‑M2/11‑46 (MQ=255) gaattttatATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGAt > 1:3003267‑M2/10‑50 (MQ=255) gaattttatATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGAt < 1:5152735‑M2/41‑1 (MQ=255) aattttatATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGAtt < 2:4774178‑M2/42‑1 (MQ=255) attttatATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGAttt > 1:3810648‑M2/8‑50 (MQ=255) ttttatATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGAtttt < 1:124531‑M2/44‑1 (MQ=255) ttttatATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGAttt > 1:64109‑M2/7‑49 (MQ=255) ttttatATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGAttt > 1:4078359‑M2/7‑49 (MQ=255) tttatATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTa > 1:3788901‑M2/6‑50 (MQ=255) tatATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTAt < 2:126600‑M2/46‑1 (MQ=255) tatATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATg > 2:2266640‑M2/4‑50 (MQ=255) atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATg > 1:2183279‑M2/3‑49 (MQ=255) tATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTa < 2:1827893‑M2/49‑1 (MQ=255) tATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTa < 2:4125360‑M2/49‑1 (MQ=255) | GGTAAAAGAATTCGCTTATCAAATCATTACCAGAATATAATACCATAATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > NC_000913/3653666‑3653763 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |