| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,286,401 | Δ3,780 bp | [yejO]–[yejO] | [yejO], insH‑8, [yejO] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2286401 | 2290180 | 3780 | 116 [0] | [0] 116 | [yejO]–[yejO] | [yejO],insH‑8,[yejO] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2286400 | 0 (0.000) | 116 (1.190) | 63/98 | 0.0 | 100% | pseudogene (2515/2525 nt) | yejO | adhesin‑like autotransporter YejO |
| ? | NC_000913 | 2290181 = | 0 (0.000) | intergenic (‑1/‑319) | yejO/narP | adhesin‑like autotransporter YejO/DNA‑binding transcriptional dual regulator NarP | |||||
Only 100 of 116 total aligned reads displayed.
CAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2286352‑2286400‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAG > NC_000913/2290181‑2290229 CAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCATACCGTCCT > 1:246558/1‑50CAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 1:532058/1‑50CAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 1:4188889/1‑50CAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT < 1:1955478/50‑1 AGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 1:6829724/1‑49 AGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 1:6538725/1‑49 AGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 1:2598912/1‑49 GACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 1:6718362/1‑48 ACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAG < 1:7108080/50‑1 ACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAG > 1:5214321/1‑50 CCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGC < 1:6350430/50‑1 CGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCT > 1:5851855/1‑50 CGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCT > 1:3006333/1‑50 CGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCT > 1:2150042/1‑50 GTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTT > 1:1211281/1‑50 GTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTT < 1:1025452/50‑1 TGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTT < 1:5629582/50‑1 ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCA > 1:6402276/1‑50 ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCA > 1:362429/1‑50 ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCA < 1:7285249/50‑1 ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTC < 1:3973490/49‑1 ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTC < 1:3843793/49‑1 CACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCAT > 1:741197/1‑50 CATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCC > 1:3317558/1‑50 ATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCT < 1:2624303/50‑1 ATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCT < 1:1591094/50‑1 ATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCT < 1:84963/50‑1 ATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCT < 1:3180432/50‑1 ATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCC > 1:650533/1‑49 ATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCC > 1:778984/1‑49 ATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCC > 1:3151394/1‑49 TCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTA < 1:1949316/50‑1 ACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTAT > 1:3910740/1‑49 ACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTAT < 1:259031/49‑1 CAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATG > 1:5532769/1‑49 CAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATG > 1:7040817/1‑49 CAGCCGGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATG > 1:3012505/1‑49 AGCCTGTTTTTTTTCTGTTATCACAACGTCCTGAGCTTTCATCCTTTGAA < 1:5069096/50‑1 AGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAA < 1:65827/50‑1 AGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGA > 1:2102302/1‑49 GCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAA > 1:4514807/1‑50 GCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAA < 1:5662762/50‑1 GCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAA > 1:2593368/1‑50 GCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAA > 1:6347274/1‑50 GCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAA > 1:6486384/1‑50 CCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAAT > 1:3470781/1‑50 CCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAAT > 1:3986627/1‑50 CTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAAT > 1:4075686/1‑49 GTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAA > 1:1950543/1‑50 GTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAA > 1:591372/1‑50 TTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAAT < 1:631076/50‑1 TTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTA < 1:1562275/48‑1 TTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATT > 1:4702056/1‑50 TTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATT > 1:2911706/1‑50 TTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATT > 1:2905068/1‑50 TATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATT < 1:5348496/49‑1 ATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTG < 1:6536483/49‑1 TTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCT < 1:6399356/50‑1 TTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGT > 1:1880291/1‑50 TTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTG < 1:2409199/49‑1 TCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGT < 1:5833140/49‑1 TCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGT < 1:3228369/49‑1 CTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTT > 1:5460314/1‑49 CTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTT < 1:3286396/49‑1 CTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTT > 1:6043083/1‑49 TTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAA < 1:5771118/50‑1 TTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAA < 1:6995750/50‑1 TTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAA > 1:2614379/1‑48 TTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAA > 1:2440152/1‑48 TTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAA > 1:3601255/1‑48 TTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTA < 1:5450901/47‑1 TTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTA < 1:3023950/47‑1 TATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAG > 1:363504/1‑50 ATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAG > 1:4788650/1‑49 ATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAG > 1:4345223/1‑49 ATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAG > 1:6985871/1‑49 ATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAG > 1:3502270/1‑49 ATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAG > 1:293018/1‑49 TCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCA > 1:683834/1‑50 TCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCA < 1:2458790/50‑1 TCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCA > 1:2664722/1‑50 TCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCA < 1:427611/50‑1 TCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGC < 1:5930679/49‑1 TCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGC < 1:7375081/49‑1 TCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGC < 1:6854864/49‑1 CAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCAT > 1:4301232/1‑50 AGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATT < 1:392057/50‑1 AGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATT > 1:2103718/1‑50 GAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTG > 1:3016246/1‑50 GAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTG > 1:785738/1‑50 cACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGG > 1:7027926/2‑50 AACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGG < 1:1764944/50‑1 AACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGG > 1:1637344/1‑50 ACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTACAAGCATTGGG > 1:2498545/1‑50 ACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGG < 1:3667566/50‑1 ACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGG < 1:1938587/50‑1 CGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGG > 1:3607288/1‑49 TCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTAC < 1:4963735/50‑1 CCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTA > 1:4843569/1‑48 CTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAG < 1:4903754/50‑1 CAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2286352‑2286400‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAG > NC_000913/2290181‑2290229 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |