| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,090,347 | Δ708 bp | coding (1‑708/708 nt) | endA → | DNA‑specific endonuclease I |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3090347 | 3091054 | 708 | 100 [0] | [0] 97 | endA | DNA‑specific endonuclease I |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3090346 | 0 (0.000) | 97 (0.990) | 48/98 | 0.1 | 100% | intergenic (+94/‑1) | yggI/endA | conserved protein YggI/DNA‑specific endonuclease I |
| ? | NC_000913 | 3091055 = | 0 (0.000) | intergenic (+1/‑79) | endA/rsmE | DNA‑specific endonuclease I/16S rRNA m(3)U1498 methyltransferase | |||||
CAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTAC > NC_000913/3091006‑3091100 | ccaaaacagctttcgctacgttgctggctcgttttaacatggagaagtgc > 1:3657674‑M2/50‑50 (MQ=255)ccaaaacagctttcgctacgttgctggctcgttttaacacggagaagtgc > 1:534567‑M2/50‑50 (MQ=255) caaaacagctttcgctacgttgctggctcgttttaacacggagaagtgcc > 1:4601650‑M2/49‑50 (MQ=255) caaaacagctttcgctacgttgctggctcgttttaacacggagaagtgcc < 1:5708920‑M2/2‑1 (MQ=255) caaaacagctttcgctacgttgctggctcgttttaacacggagaagtgcc < 1:1995103‑M2/2‑1 (MQ=255) caaaacagctttcgctacgttgctggctcgttttaacacggagaagtgcc > 1:7078249‑M2/49‑50 (MQ=255) aaaacagctttcgctacgttgctggctcgttttaacacggagaagtgcc > 1:2658240‑M2/48‑49 (MQ=255) aaaacagctttcgctacgttgctggctcgttttaacacggagaagtgcc > 1:6955186‑M2/48‑49 (MQ=255) aaaacagctttcgctacgttgctggctcgttttaacacggagaagtgcc > 1:1717056‑M2/48‑49 (MQ=255) aaacagctttcgctacgttgctggctcgttttaacacggagaagtgccca > 1:6682756‑M2/47‑48 (MQ=255) aaacagctttcgctacgttgctggctcgttttaacacggagaagtgCCTa < 1:5985780‑M2/4‑1 (MQ=255) aaacagctttcgctacgttgctggctcgttttaacacggagaagtgCCTa < 1:1908408‑M2/4‑1 (MQ=255) aaacagctttcgctacgttgctggctcgttttaacacggagaagtgCCTa > 1:2190082‑M2/47‑50 (MQ=255) aacagctttcgctacgttgctggctcgttttaacacggagaagtgCCTac < 1:1657817‑M2/5‑1 (MQ=255) aacagctttcgctacgttgctggctcgttttaacacggagaagtgCCTac < 1:2174946‑M2/5‑1 (MQ=255) aacagctttcgctacgttgctggctcgttttaacacggagaagtgCCTac < 1:6751979‑M2/5‑1 (MQ=255) aacagctttcgctacgttgctggctcgttttaacacggagaagtgCCTa > 1:307016‑M2/46‑49 (MQ=255) aacagctttcgctacgttgctggctcgttttaacacggagaagtgCCTa > 1:6648843‑M2/46‑49 (MQ=255) aacagctttcgctacgttgctggctcgttttaacacggagaagtgCCTa > 1:1297058‑M2/46‑49 (MQ=255) acagctttcgctacgttgctggctcgttttaacacggagaagtgCCTaca < 1:6506845‑M2/6‑1 (MQ=255) agctttcgctacgttgctggctcgttttaacacggagaagtgCCTACACt < 1:873051‑M2/8‑1 (MQ=255) gctttcgctacgttgctggctcgttttaacacggagaagtgCCTacac > 1:4286275‑M2/42‑48 (MQ=255) gctttcgctacgttgctggctcgttttaacacggagaagtgCCTacac > 1:6018553‑M2/42‑48 (MQ=255) gctttcgctacgttgctggctcgttttaacacggagaagtgCCTACACTa < 1:2939587‑M2/9‑1 (MQ=255) gctttcgctacgttgctggctcgttttaacacggagaagtgCCTACACTa < 1:5746464‑M2/9‑1 (MQ=255) gctttcgctacgttgctggctcgttttaacacggagaagtgCCTACACTa < 1:5209711‑M2/9‑1 (MQ=255) ctttcgctacgttgctggctcgttttaacacggagaagtgCCTACACTAg < 1:5167678‑M2/10‑1 (MQ=255) ctttcgctacgttgctggctcgttttaacacggagaagtgCCTACACTAg < 1:4142898‑M2/10‑1 (MQ=255) tttcgctacgttgctggctcgttttaacacggagaagtgCCTACACTAGc > 1:3016553‑M2/40‑50 (MQ=255) tttcgctacgttgctggctcgttttaacacggagaagtgCCTACACTAGc > 1:6927531‑M2/40‑50 (MQ=255) tttcgctacgttgctggctcgttttaacacggagaagtgCCTACACTAGc > 1:5993671‑M2/40‑50 (MQ=255) tttcgctacgttgctggctcgttttaacacggagaagtgCCTACACTAGc > 1:7117734‑M2/40‑50 (MQ=255) tcgctacgttgctggctcgttttaacacggagaagtgCCTACACTAGc < 1:5116068‑M2/11‑1 (MQ=255) tcgctacgttgctggctcgttttaacacggagaagtgCCTACACTAGc < 1:1457946‑M2/11‑1 (MQ=255) tcgctacgttgctggctcgttttaacacggagaagtgCCTACACTAGCg < 1:3085113‑M2/12‑1 (MQ=255) gctacgttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGa > 1:4693007‑M2/36‑50 (MQ=255) gctacgttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGa > 1:2953165‑M2/36‑50 (MQ=255) gctacgttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGa > 1:4504376‑M2/36‑50 (MQ=255) gctacgttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGa > 1:101731‑M2/36‑50 (MQ=255) gctacgttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGa > 1:5428852‑M2/36‑50 (MQ=255) ctacgttgctggctcgttttaacacggaaaagtgCCTACACTAGCGGGAt > 1:7156266‑M2/35‑50 (MQ=255) tacgttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGAtt > 1:6138998‑M2/34‑50 (MQ=255) tacgttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGAtt > 1:216546‑M2/34‑50 (MQ=255) acgttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTc > 1:1306482‑M2/33‑50 (MQ=255) cgttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGAtt < 1:4130110‑M2/17‑1 (MQ=255) gttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCtt < 1:5658706‑M2/20‑1 (MQ=255) gttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCtt < 1:242048‑M2/20‑1 (MQ=255) gttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCtt < 1:7379645‑M2/20‑1 (MQ=255) gttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCtt > 1:6277384‑M2/31‑50 (MQ=255) gttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCtt < 1:2961248‑M2/20‑1 (MQ=255) gttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCtt < 1:989875‑M2/20‑1 (MQ=255) gttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCtt > 1:5938981‑M2/31‑50 (MQ=255) tgctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCtttt > 1:549802‑M2/29‑50 (MQ=255) tgctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCtttt > 1:1012114‑M2/29‑50 (MQ=255) gctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCtttt < 1:250266‑M2/22‑1 (MQ=255) gctggctcgttttaacacggagaagcgCCTACACTAGCGGGATTCttttt > 1:2437684‑M2/28‑50 (MQ=255) ctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCttttt < 1:1434798‑M2/23‑1 (MQ=255) ctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCttttt < 1:2275573‑M2/23‑1 (MQ=255) tggctcgttttaacacggagaagtgCCTACACTAGCGGGCTTCTTTTTGt > 1:2560353‑M2/26‑50 (MQ=255) tggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGt > 1:5332134‑M2/26‑50 (MQ=255) tggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGt > 1:5695726‑M2/26‑50 (MQ=255) ggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGt > 1:563245‑M2/25‑49 (MQ=255) gctcgttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGtt < 1:732560‑M2/26‑1 (MQ=255) gctcgttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGtt < 1:1949240‑M2/26‑1 (MQ=255) gctcgttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGtt > 1:3130959‑M2/24‑49 (MQ=255) gctcgttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGt < 1:4279685‑M2/25‑1 (MQ=255) gctcgttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGt < 1:6160948‑M2/25‑1 (MQ=255) gctcgttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGt < 1:5504148‑M2/25‑1 (MQ=255) ctcgttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTaa > 1:2344210‑M2/23‑50 (MQ=255) gttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAAccc > 1:6937670‑M2/20‑50 (MQ=255) gttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAAccc > 1:122598‑M2/20‑50 (MQ=255) gttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAAccc > 1:1005588‑M2/20‑50 (MQ=255) gttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAAccc < 1:5267167‑M2/31‑1 (MQ=255) gttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAAccc > 1:393330‑M2/20‑50 (MQ=255) ttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAAcccc > 1:4984297‑M2/19‑50 (MQ=255) ttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAAcccc > 1:2617404‑M2/19‑50 (MQ=255) ttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAAcccc < 1:3348852‑M2/32‑1 (MQ=255) tttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAAcccc > 1:286698‑M2/18‑49 (MQ=255) ttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCt < 1:2767759‑M2/33‑1 (MQ=255) ttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTa > 1:6085937‑M2/17‑50 (MQ=255) ttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTa > 1:534798‑M2/17‑50 (MQ=255) ttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTa > 1:5400924‑M2/17‑50 (MQ=255) aacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTAcc > 1:226356‑M2/15‑50 (MQ=255) aacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTAc < 1:4080011‑M2/35‑1 (MQ=255) aacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTAc < 1:2799960‑M2/35‑1 (MQ=255) acacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTAcc < 1:5237009‑M2/36‑1 (MQ=255) acacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTAcc < 1:767281‑M2/36‑1 (MQ=255) cacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTAcccc < 1:1525028‑M2/38‑1 (MQ=255) acggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCa < 1:5777585‑M2/39‑1 (MQ=255) agaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCAcgcg > 1:5850096‑M2/8‑50 (MQ=255) agaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCAcgcg > 1:2154640‑M2/8‑50 (MQ=255) agaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCAcgcg > 1:1252307‑M2/8‑50 (MQ=255) gaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCAcgcg > 1:3233402‑M2/7‑49 (MQ=255) aagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTa > 1:1602731‑M2/6‑50 (MQ=255) agtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTa > 1:6135551‑M2/5‑49 (MQ=255) agtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTAc < 1:2923887‑M2/46‑1 (MQ=255) agtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTAc < 1:1679801‑M2/46‑1 (MQ=255) | CAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTAC > NC_000913/3091006‑3091100 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |