mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 17 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4424908 = | 86 (1.140) | 4 (0.050) | 4/250 | NT | 4.9% | intergenic (‑117/‑210) | yjfY/rpsF | YhcN family protein, periplasmic/30S ribosomal subunit protein S6 |
| ? | NC_000913 | 4424949 = | 72 (0.990) | intergenic (‑158/‑169) | yjfY/rpsF | YhcN family protein, periplasmic/30S ribosomal subunit protein S6 | |||||
| * | ? | NC_000913 | = 4272576 | 76 (1.000) | 3 (0.040) | 3/248 | NT | 4.0% | coding (1296/2823 nt) | uvrA | ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC |
| ? | NC_000913 | = 4272601 | 71 (0.980) | coding (1271/2823 nt) | uvrA | ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC | |||||
| * | ? | NC_000913 | 3844903 = | 114 (1.510) | 5 (0.070) | 5/250 | NT | 4.4% | coding (940/1767 nt) | adeD | cryptic adenine deaminase |
| ? | NC_000913 | 3844942 = | 110 (1.510) | coding (979/1767 nt) | adeD | cryptic adenine deaminase | |||||
| * | ? | NC_000913 | 3823168 = | 245 (3.240) | 3 (0.040) | 3/250 | NT | 1.2% | coding (769/2109 nt) | spoT | bifunctional (p)ppGpp synthetase II/ guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase |
| ? | NC_000913 | 3823207 = | 264 (3.630) | coding (808/2109 nt) | spoT | bifunctional (p)ppGpp synthetase II/ guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase | |||||
| * | ? | NC_000913 | 3778171 = | 292 (3.860) | 6 (0.080) | 4/250 | NT | 1.9% | coding (773/1656 nt) | lldP | L‑lactate permease |
| ? | NC_000913 | 3778215 = | 348 (4.780) | coding (817/1656 nt) | lldP | L‑lactate permease | |||||
| * | ? | NC_000913 | 3761270 = | 304 (4.010) | 6 (0.080) | 5/250 | NT | 2.0% | intergenic (‑21/+77) | selA/yibF | selenocysteine synthase/glutathione S‑transferase homolog |
| ? | NC_000913 | 3761292 = | 300 (4.120) | intergenic (‑43/+55) | selA/yibF | selenocysteine synthase/glutathione S‑transferase homolog | |||||
| * | ? | NC_000913 | 3756895 = | 289 (3.820) | 3 (0.040) | 3/244 | NT | 1.1% | coding (933/1152 nt) | yiaY | L‑threonine dehydrogenase |
| ? | NC_000913 | 3756970 = | 283 (3.980) | coding (858/1152 nt) | yiaY | L‑threonine dehydrogenase | |||||
| * | ? | NC_000913 | = 3749480 | 259 (3.420) | 3 (0.040) | 3/252 | NT | 1.1% | coding (249/861 nt) | sgbU | putative L‑xylulose 5‑phosphate 3‑epimerase |
| ? | NC_000913 | = 3749561 | 285 (3.880) | coding (330/861 nt) | sgbU | putative L‑xylulose 5‑phosphate 3‑epimerase | |||||
| * | ? | NC_000913 | = 3729862 | 246 (3.250) | 4 (0.060) | 4/248 | NT | 1.6% | coding (904/1323 nt) | xylA | D‑xylose isomerase |
| ? | NC_000913 | = 3729900 | 257 (3.560) | coding (866/1323 nt) | xylA | D‑xylose isomerase | |||||
| * | ? | NC_000913 | 3725624 = | 257 (3.390) | 6 (0.080) | 5/248 | NT | 2.5% | coding (89/300 nt) | ysaB | uncharacterized protein |
| ? | NC_000913 | 3725648 = | 220 (3.050) | coding (65/300 nt) | ysaB | uncharacterized protein | |||||