mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 29 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4542690 | 105 (0.870) | 3 (0.030) | 3/242 | NT | 2.8% | intergenic (+57/‑425) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) |
| ? | NC_000913 | = 4542986 | 112 (1.000) | intergenic (+353/‑129) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) | |||||
| * | ? | NC_000913 | = 4417460 | 130 (1.080) | 4 (0.040) | 4/246 | NT | 3.3% | coding (509/750 nt) | yjfP | acyl CoA esterase |
| ? | NC_000913 | = 4417479 | 115 (1.010) | coding (528/750 nt) | yjfP | acyl CoA esterase | |||||
| * | ? | NC_000913 | 4404330 = | 119 (0.990) | 4 (0.030) | 4/254 | NT | 3.4% | intergenic (+26/‑56) | hflC/yjeT | HflB protease modulator specific for phage lambda cII repressor/DUF2065 family protein |
| ? | NC_000913 | 4404365 = | 111 (0.950) | intergenic (+61/‑21) | hflC/yjeT | HflB protease modulator specific for phage lambda cII repressor/DUF2065 family protein | |||||
| * | ? | NC_000913 | = 3870040 | 98 (0.820) | 3 (0.030) | 3/248 | NT | 2.8% | coding (664/1065 nt) | cbrA | colicin M resistance protein; FAD‑binding protein, putative oxidoreductase |
| ? | NC_000913 | = 3870083 | 113 (0.990) | coding (707/1065 nt) | cbrA | colicin M resistance protein; FAD‑binding protein, putative oxidoreductase | |||||
| * | ? | NC_000913 | = 3838216 | 379 (3.160) | 4 (0.040) | 4/244 | NT | 1.1% | intergenic (+79/‑32) | setC/yicL | putative arabinose efflux transporter/EamA family inner membrane putative transporter |
| ? | NC_000913 | = 3838231 | 388 (3.440) | intergenic (+94/‑17) | setC/yicL | putative arabinose efflux transporter/EamA family inner membrane putative transporter | |||||
| * | ? | NC_000913 | 3819511 = | 442 (3.680) | 14 (0.130) | 9/242 | NT | 3.4% | coding (1660/1683 nt) | ligB | DNA ligase, NAD(+)‑dependent |
| ? | NC_000913 | 3819537 = | 381 (3.410) | coding (1634/1683 nt) | ligB | DNA ligase, NAD(+)‑dependent | |||||
| * | ? | NC_000913 | 3814121 = | 501 (4.170) | 5 (0.040) | 5/248 | NT | 1.0% | coding (190/456 nt) | dut | deoxyuridinetriphosphatase |
| ? | NC_000913 | 3814140 = | 489 (4.270) | coding (209/456 nt) | dut | deoxyuridinetriphosphatase | |||||
| * | ? | NC_000913 | = 3795026 | 399 (3.320) | 9 (0.080) | 8/244 | NT | 2.3% | coding (98/1047 nt) | waaF | ADP‑heptose:LPS heptosyltransferase II |
| ? | NC_000913 | = 3795059 | 397 (3.520) | coding (131/1047 nt) | waaF | ADP‑heptose:LPS heptosyltransferase II | |||||
| * | ? | NC_000913 | 3749433 = | 364 (3.030) | 14 (0.120) | 9/252 | NT | 3.7% | coding (202/861 nt) | sgbU | putative L‑xylulose 5‑phosphate 3‑epimerase |
| ? | NC_000913 | 3749475 = | 366 (3.150) | coding (244/861 nt) | sgbU | putative L‑xylulose 5‑phosphate 3‑epimerase | |||||
| * | ? | NC_000913 | = 3621534 | NA (NA) | 4 (0.040) | 3/244 | NT | 100% | coding (2343/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
| ? | NC_000913 | = 3621592 | 0 (0.000) | coding (2401/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor | |||||