| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 3,247,848 | IS2 (+) +5 bp | coding (76‑80/663 nt) | yqjA → | general envelope maintenance protein; DedA family inner membrane protein; putative multidrug efflux transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2070271 | NA (NA) | 76 (1.160) | 51/198 | 0.3 | 96.0% | noncoding (1/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | = 3247852 | 3 (0.050) | coding (80/663 nt) | yqjA | general envelope maintenance protein; DedA family inner membrane protein; putative multidrug efflux transporter | |||||
| * | ? | NC_000913 | 2996361 = | NA (NA) | 60 (0.920) | 45/198 | 0.6 | 95.0% | noncoding (1331/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | 3247848 = | 3 (0.050) | coding (76/663 nt) | yqjA | general envelope maintenance protein; DedA family inner membrane protein; putative multidrug efflux transporter | |||||
Only 100 of 140 total aligned reads displayed.
GATTCACCAGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATG‑ATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACAGTTTACTGGTATTGGTCGGCGTGTT > NC_000913/3247754‑3247951 | tCACCAGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATG‑ATTGGCATtaga > 1:1294955‑M2/1‑96 (MQ=255) ggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTa < 2:1011654‑M2/11‑1 (MQ=255) cAGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATG‑ATTGGCATtagactgg < 2:429065‑M2/100‑9 (MQ=255) aGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATG‑ATTGGCATtagactggc > 2:1457022‑M2/1‑91 (MQ=255) tatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTAttt < 1:653152‑M2/14‑1 (MQ=255) ggAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGTCAATCCATCGATG‑ATTGGCATtagactggcc < 1:765335‑M2/100‑11 (MQ=255) ggAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATG‑ATTGGCATtagactggcc < 2:478704‑M2/100‑11 (MQ=255) tcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTg < 1:1576506‑M2/16‑1 (MQ=255) aataatGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATG‑ATTGGCATtagactggcccc > 2:1240737‑M2/1‑88 (MQ=255) taatGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATG‑ATTGGCATtagactggccccct > 2:103553‑M2/1‑86 (MQ=255) gctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggcaatataggggcaaatccaGGCATGTTGTATTTTGTc > 1:1284727‑M2/83‑100 (MQ=255) aatgaatgGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATG‑ATTGGCATtagactggccccctg < 2:1359161‑M2/100‑16 (MQ=255) atgaatgGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATG‑ATTGGCATtagactggccccctga > 1:1419161‑M2/1‑84 (MQ=255) tgaatgGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATG‑ATTGGCATtagactggccccctgaa > 2:640775‑M2/1‑83 (MQ=255) ngaatggAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATG‑ATTGGCATtagactggccccctgaa < 2:277969‑M2/99‑18 (MQ=255) cgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCttg > 2:395614‑M2/80‑100 (MQ=255) ccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTTTCttgtt < 2:837681‑M2/23‑1 (MQ=255) tgGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATG‑ATTGGCATGTTGTATTTTGTCttgtttgt > 2:1315675/1‑100 (MQ=255) ggAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATG‑ATTGGCATtagactggccccctgaatctcc > 2:273412‑M2/1‑78 (MQ=255) ggAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATG‑ATTGGCATtagactggccccctgaatctcc < 1:399573‑M2/100‑23 (MQ=255) ggAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATG‑ATTGGCATtagactggccccctgaatctcc > 1:1554184‑M2/1‑78 (MQ=255) ggAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATG‑ATTGGCATtagactggccccctgaatctcc < 2:520631‑M2/100‑23 (MQ=255) cgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCttgtttgt > 1:717718‑M2/75‑100 (MQ=255) gAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGACACCCTGGCCAATCCATCGATG‑ATTGGCATtagactggccccctcaatctcca > 1:692228‑M2/1‑77 (MQ=255) cTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATG‑ATTGGCATtagactggccccctgaatctccagac < 2:384499‑M2/100‑27 (MQ=255) ttttTACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATG‑ATTGGCATtagactggccccctgaatctccataca > 2:1526550‑M2/1‑73 (MQ=255) gACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATG‑ATTGGCATtagactggccccctgaatctccagacaacca < 2:441512‑M2/100‑32 (MQ=255) ctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGtt < 2:1213905‑M2/35‑1 (MQ=255) tgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTc > 2:1055190‑M2/65‑100 (MQ=255) cggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCt < 1:1273390‑M2/38‑1 (MQ=255) gcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTg > 2:210180‑M2/61‑100 (MQ=255) aTTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATG‑ATTGGCATtagactggccccctgaatctccagacaaccaatatca > 1:1359147‑M2/1‑63 (MQ=255) agcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGaa < 1:58355‑M2/42‑1 (MQ=255) gctgcAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATG‑ATTGGCATtagactggccccctgaatctccagacaaccaatatcactt < 2:146461‑M2/100‑41 (MQ=255) gggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTGTGTAATTTTGTTCCTTGAAAAc < 1:928651‑M2/45‑1 (MQ=255) tgcAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATG‑ATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaa < 2:780771‑M2/100‑43 (MQ=255) tgcAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATG‑ATTGGCATtagactggccccctgaatctccagacaaccaatatcactta < 1:380831‑M2/99‑42 (MQ=255) ggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACg > 2:687996‑M2/55‑100 (MQ=255) gcctgtaatgggttaagtgataacagctgtctggcaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAaaccg > 1:897518‑M2/54‑98 (MQ=255) gcAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATG‑ATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaa < 1:364576‑M2/100‑44 (MQ=255) cttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGgc > 1:145573‑M2/53‑100 (MQ=255) cAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATG‑ATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaat < 2:134450‑M2/100‑45 (MQ=255) gtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGgcttg < 1:691090‑M2/51‑1 (MQ=255) aatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGgcttgct > 1:109914‑M2/48‑100 (MQ=255) tgtgGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATG‑ATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgat > 1:833093‑M2/1‑49 (MQ=255) tgGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATG‑ATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatag > 1:1376483‑M2/1‑47 (MQ=255) gttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCcgg > 1:483354‑M2/43‑100 (MQ=255) gcgcAGGATTTTGAAACCCTGGCCAATCCATCGATG‑ATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCcggcgg < 1:233750/100‑1 (MQ=255) cgcAGGATTTTGAAACCCTGGCCAATCCATCGATG‑ATTGGCATtagactggccccctgaatctccagacaaccaatatcacttatttaagtgatattggt > 2:1484037‑M2/1‑43 (MQ=255) gcAGGATTTTGAAACCCTGGCCAATCCATCGATG‑ATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtctta < 1:1012587‑M2/100‑59 (MQ=255) agtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCggcggc > 2:1226199‑M2/39‑100 (MQ=255) gataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCtt > 2:831697‑M2/36‑100 (MQ=255) gataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCtt > 1:1294340‑M2/36‑100 (MQ=255) aacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCttttt > 1:611818‑M2/33‑100 (MQ=255) tttGAAACCCTGGCCAATCCATCGATG‑ATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactag > 2:959241‑M2/1‑35 (MQ=255) tttGAAACCCTGGCCAATCCATCGATG‑ATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTAc < 2:283580/100‑1 (MQ=255) ttGAAACCCTGGCCAATCCATCGATG‑ATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagt > 2:147072‑M2/1‑34 (MQ=255) cagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTAc > 1:519128‑M2/31‑100 (MQ=255) tGAAACCCTGGCCAATCCATCGATG‑ATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtt < 1:251097‑M2/100‑68 (MQ=255) gatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCg > 2:1597326‑M2/29‑100 (MQ=255) aCCCTGGCCAATCCATCGATG‑ATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttta < 2:1438848‑M2/100‑72 (MQ=255) ctaatgccaatC‑ATCGATGGATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttag > 1:577461‑M2/6‑28 (MQ=255) cccTGGCCAATCCATCGATG‑ATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttag > 1:1558464‑M2/1‑28 (MQ=255) cccTGGCCAATCCATCGATG‑ATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttag > 2:1451318‑M2/1‑28 (MQ=255) cccTGGCCAATCCATCGATG‑ATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttag > 1:241778‑M2/1‑28 (MQ=255) cccTGGCCAATCCATCGATG‑ATTCGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttag > 1:635492‑M2/1‑28 (MQ=255) ctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGa > 1:12683‑M2/24‑100 (MQ=255) tggaaataaaggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGAc > 1:79808‑M2/23‑100 (MQ=255) cTGGCCAATCCATCGATG‑ATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagac > 1:646980‑M2/1‑26 (MQ=255) cTGGCCAATCCATCGATG‑ATTGCCATtatactggcccaatgaatctccagacaatcaagatcactgaaataagtgatagtcttaatactagtttttaga > 1:1112242‑M2/1‑26 (MQ=255) tGGCCAATCCATCGATG‑ATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagact > 2:606596‑M2/1‑25 (MQ=255) gaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACAg < 1:1196504‑M2/80‑1 (MQ=255) tataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACAGTTTa > 1:1214316‑M2/17‑100 (MQ=255) aaTCCATCGATG‑ATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcn > 1:808107‑M2/1‑20 (MQ=255) aaTCCATCGATG‑ATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtca < 2:911065‑M2/100‑81 (MQ=255) aTCCATCGATG‑ATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcat > 1:136599‑M2/1‑19 (MQ=255) taggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACAGTTTACt < 2:1002372‑M2/86‑1 (MQ=255) tCCATCGATG‑ATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcatn > 1:277966‑M2/1‑18 (MQ=255) ccATCGATG‑ATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattg < 1:224154‑M2/100‑84 (MQ=255) ggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACAGTTTACTgg < 2:747543‑M2/88‑1 (MQ=255) ggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACAGTTTACTgg < 2:1269207‑M2/88‑1 (MQ=255) cATCGATG‑ATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattgg > 1:134448‑M2/1‑16 (MQ=255) ggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACAGTTTACTGGTa > 2:514901‑M2/11‑100 (MQ=255) gcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACAGTTTACTGGTa > 1:769623‑M2/10‑99 (MQ=255) gatg‑atTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaa > 2:1489809‑M2/1‑12 (MQ=255) gatg‑atTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaa < 2:1233504‑M2/100‑89 (MQ=255) caaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTATTACCGGGCGACAGTTTACTGGTAtt < 2:976508‑M2/92‑1 (MQ=255) g‑atTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacag > 1:1549989‑M2/1‑9 (MQ=255) tccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACAGTTTACTGGTATTGGTc > 1:439836‑M2/5‑100 (MQ=255) ccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGTCGGCCTTTTTACCGGGCGCCAGTTTACTGGTATTGGTCg > 1:671354‑M2/4‑100 (MQ=255) aGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACAGTTTACTGGTATTGGTCGGc > 2:1065532‑M2/2‑100 (MQ=255) ggCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattgtagaacagatga < 1:1480226‑M2/100‑96 (MQ=255) gCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgat > 1:478700‑M2/1‑4 (MQ=255) gCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgat > 2:1389666‑M2/1‑4 (MQ=255) aTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattg > 2:1394933‑M2/1‑2 (MQ=255) ttagactggcccgctgaatgtccagacaaccaatatcacttaaataagtgatagtcttaataccagtttttagactattcattggaggacagatgattga < 1:1342444‑M2/100‑100 (MQ=255) ttagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattga < 1:1498705‑M2/100‑100 (MQ=255) ttagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattga < 1:43651‑M2/100‑100 (MQ=255) tgttgtATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACAGTTTACTGGTATTGGTCGGCGTGtt < 1:1415525/100‑1 (MQ=255) tgttgtATGTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACAGTTTACTGGTATTGGTCGGCGTGtt < 1:313149/100‑1 (MQ=255) | GATTCACCAGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATG‑ATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACAGTTTACTGGTATTGGTCGGCGTGTT > NC_000913/3247754‑3247951 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |