| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 3,247,848 | IS2 (+) +5 bp | coding (76‑80/663 nt) | yqjA → | general envelope maintenance protein; DedA family inner membrane protein; putative multidrug efflux transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2070271 | NA (NA) | 76 (1.160) | 51/198 | 0.3 | 96.0% | noncoding (1/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | = 3247852 | 3 (0.050) | coding (80/663 nt) | yqjA | general envelope maintenance protein; DedA family inner membrane protein; putative multidrug efflux transporter | |||||
| * | ? | NC_000913 | 2996361 = | NA (NA) | 60 (0.920) | 45/198 | 0.6 | 95.0% | noncoding (1331/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | 3247848 = | 3 (0.050) | coding (76/663 nt) | yqjA | general envelope maintenance protein; DedA family inner membrane protein; putative multidrug efflux transporter | |||||
Only 100 of 137 total aligned reads displayed.
TAACCGATTCACCAGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACAGTTTACTGGTATTGGTCGGCG > NC_000913/3247749‑3247947 | tagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccag < 2:356804‑M2/1‑1 (MQ=255)tagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccag < 2:439783‑M2/1‑1 (MQ=255)tAACCGATTCACCAGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTg > 2:110742/1‑100 (MQ=255) ccGATTCACCAGGAATAATGAATGGAACTTTTGGCCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCa > 1:959232/1‑100 (MQ=255) gATTCACCAGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATt < 1:1360948‑M2/100‑2 (MQ=255) tCACCAGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATtaga > 1:1294955‑M2/1‑96 (MQ=255) gggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAtgttg > 1:1548139‑M2/91‑99 (MQ=255) ggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTa < 2:1011654‑M2/11‑1 (MQ=255) tatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTAttt < 1:653152‑M2/14‑1 (MQ=255) aGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATtagactggc > 2:1457022‑M2/1‑91 (MQ=255) ggAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGTCAATCCATCGATGATTGGCATtagactggcc < 1:765335‑M2/100‑11 (MQ=255) ggAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATtagactggcc < 2:478704‑M2/100‑11 (MQ=255) tcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTg < 1:1576506‑M2/16‑1 (MQ=255) aataatGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATtagactggcccc > 2:1240737‑M2/1‑88 (MQ=255) aataatGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATtagactggcccc < 2:136601‑M2/100‑13 (MQ=255) gctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggcaatataggggcaaatccaGGCATGTTGTATTTTGTc > 1:1284727‑M2/83‑100 (MQ=255) aatgaatgGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATtagactggccccctg < 2:1359161‑M2/100‑16 (MQ=255) cgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCttg > 2:395614‑M2/80‑100 (MQ=255) atgaatgGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATtagactggccccctga < 1:1389652‑M2/100‑17 (MQ=255) atgaatgGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATtagactggccccctga > 1:1419161‑M2/1‑84 (MQ=255) atgaatgGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATtagactggccccctga < 2:1480306‑M2/100‑17 (MQ=255) tgaatgGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATtagactggccccctgaa > 2:640775‑M2/1‑83 (MQ=255) gccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCttgt > 1:607671‑M2/79‑100 (MQ=255) ccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTTTCttgtt < 2:837681‑M2/23‑1 (MQ=255) tgGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCttgtttgt > 2:1315675/1‑100 (MQ=255) ggAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATtagactggccccctgaatctcc < 2:520631‑M2/100‑23 (MQ=255) ggAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATtagactggccccctgaatctcc < 1:399573‑M2/100‑23 (MQ=255) ggAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATtagactggccccctgaatctcc > 2:273412‑M2/1‑78 (MQ=255) ggAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATtagactggccccctgaatctcc > 1:1554184‑M2/1‑78 (MQ=255) gAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGACACCCTGGCCAATCCATCGATGATTGGCATtagactggccccctcaatctcca > 1:692228‑M2/1‑77 (MQ=255) atatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAAttt < 2:36630‑M2/31‑1 (MQ=255) ttttTACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATtagactggccccctgaatctccataca > 2:1526550‑M2/1‑73 (MQ=255) atctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTg > 2:1462905‑M2/68‑100 (MQ=255) ctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGtt < 2:1213905‑M2/35‑1 (MQ=255) ctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGtt < 2:727741‑M2/35‑1 (MQ=255) tgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTc > 2:1055190‑M2/65‑100 (MQ=255) gACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATtagactggccccctgaatctccagacaacca < 2:441512‑M2/100‑32 (MQ=255) cggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCt < 1:1273390‑M2/38‑1 (MQ=255) gcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTg > 2:210180‑M2/61‑100 (MQ=255) cagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGa < 1:1291400‑M2/41‑1 (MQ=255) agcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGaa < 1:58355‑M2/42‑1 (MQ=255) aTTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATtagactggccccctgaatctccagacaaccaatatca > 1:1359147‑M2/1‑63 (MQ=255) gggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTGTGTAATTTTGTTCCTTGAAAAc < 1:928651‑M2/45‑1 (MQ=255) tgcAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaa < 2:780771‑M2/100‑43 (MQ=255) gcctgtaatgggttaagtgataacagctgtctggcaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAaaccg > 1:897518‑M2/54‑98 (MQ=255) gcAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaa < 1:364576‑M2/100‑44 (MQ=255) gcAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaa < 1:757262‑M2/100‑44 (MQ=255) cttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGgc > 1:145573‑M2/53‑100 (MQ=255) gtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGgcttg < 1:691090‑M2/51‑1 (MQ=255) aGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAAGCCATCGATGATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataa < 2:1129304‑M2/100‑47 (MQ=255) aatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGgcttgct > 1:109914‑M2/48‑100 (MQ=255) aatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGgcttgct > 2:1437411‑M2/48‑100 (MQ=255) aatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGgcttgct > 1:565997‑M2/48‑100 (MQ=255) ccTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATtagactggccccctgaatctccagacaaccaatatcacttatttaagtg > 1:429061‑M2/1‑51 (MQ=255) tgGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatag > 2:229923‑M2/1‑47 (MQ=255) gttaagtgataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCcgg > 1:483354‑M2/43‑100 (MQ=255) cgcAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaatcagtgatagtctt < 1:1307667‑M2/100‑58 (MQ=255) gcAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATtagacttgccccctgaatctccagacaaccaatatcacttaaataagtgatagtctta > 1:889977‑M2/1‑42 (MQ=255) gcAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtctta < 1:1012587‑M2/100‑59 (MQ=255) gataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCtt > 2:831697‑M2/36‑100 (MQ=255) ataacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCttt > 2:562772‑M2/35‑100 (MQ=255) taacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCtttt < 1:226589‑M2/67‑1 (MQ=255) taacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCtttt > 1:682559‑M2/34‑100 (MQ=255) aacagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCttttt > 1:315661‑M2/33‑100 (MQ=255) tttGAAACCCTGGCCAATCCATCGATGATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactag > 2:959241‑M2/1‑35 (MQ=255) tttGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTAc < 2:283580/100‑1 (MQ=255) cagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTAc > 1:519128‑M2/31‑100 (MQ=255) cagatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTAc > 1:259896‑M2/31‑100 (MQ=255) ttGAAACCCTGGCCAATCCATCGATGATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagt > 2:147072‑M2/1‑34 (MQ=255) tGAAACCCTGGCCAATCCATCGATGATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtt < 1:251097‑M2/100‑68 (MQ=255) gatgtctggaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCg > 2:1597326‑M2/29‑100 (MQ=255) aaaCCCTGGCCAATCCATCGATGATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttt > 2:1270536‑M2/1‑31 (MQ=255) aCCCGGGCCAATCCATCGATGATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttta > 1:1227736‑M2/1‑29 (MQ=255) cccTGGCCAATCCATCGATGATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttag > 1:1558464‑M2/1‑28 (MQ=255) cccTGGCCAATCCATCGATGATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttag > 2:1451318‑M2/1‑28 (MQ=255) cccTGGCCAATCCATCGATGATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttag > 2:406254‑M2/1‑28 (MQ=255) cccTGGCCAATCCATCGATGATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttag > 1:241778‑M2/1‑28 (MQ=255) cccTGGCCAATCCATCGATGATTCGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttag > 1:635492‑M2/1‑28 (MQ=255) tggaaataaaggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGAc > 1:79808‑M2/23‑100 (MQ=255) ccTGGCCAATCCATCGATGATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttaga > 1:1573068‑M2/1‑27 (MQ=255) cTGGCCAATCCATCGATGATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagac > 1:646980‑M2/1‑26 (MQ=255) cTGGCCAATCCATCGATGATTGCCATtatactggcccaatgaatctccagacaatcaagatcactgaaataagtgatagtcttaatactagtttttaga > 1:1112242‑M2/1‑26 (MQ=255) tGGCCAATCCATCGATGATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagact > 2:606596‑M2/1‑25 (MQ=255) gaaatataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACAg < 1:1196504‑M2/80‑1 (MQ=255) tataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACAGTTTa < 1:782418‑M2/84‑1 (MQ=255) tataggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACAGTTTa > 1:1214316‑M2/17‑100 (MQ=255) aaTCCATCGATGATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcn > 1:808107‑M2/1‑20 (MQ=255) aaTCCATCGATGATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtca < 2:911065‑M2/100‑81 (MQ=255) aaTCCATCGATGATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttcttagactagtca > 2:1047856‑M2/1‑20 (MQ=255) taggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACAGTTTACt < 2:1002372‑M2/86‑1 (MQ=255) aTCCATCGATGATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcat > 1:136599‑M2/1‑19 (MQ=255) ggggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACAGTTTACTgg < 2:747543‑M2/88‑1 (MQ=255) ccATCGATGATTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattg < 1:224154‑M2/100‑84 (MQ=255) ggcaaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACAGTTTACTGGTa > 2:514901‑M2/11‑100 (MQ=255) caaatccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTATTACCGGGCGACAGTTTACTGGTAtt < 2:976508‑M2/92‑1 (MQ=255) gatgatTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaa > 2:1489809‑M2/1‑12 (MQ=255) gatgatTGGCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaa < 2:1233504‑M2/100‑89 (MQ=255) tccaGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACAGTTTACTGGTATTGGTc > 1:439836‑M2/5‑100 (MQ=255) aGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACAGTTTACTGGTATTGGTCGGc > 2:1234780‑M2/2‑100 (MQ=255) ggCATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattgtagaacagatga < 1:1480226‑M2/100‑96 (MQ=255) | TAACCGATTCACCAGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACAGTTTACTGGTATTGGTCGGCG > NC_000913/3247749‑3247947 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |