mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | minE | 775,571 | 0 | T | A | 58.3% | 1.3 / 11.2 | 12 | D398E (GAT→GAA) | icd | isocitrate dehydrogenase, specific for NADP+ |
| * | minE | 775,580 | 0 | A | G | 53.8% | ‑2.7 / 13.3 | 13 | K401K (AAA→AAG) | icd | isocitrate dehydrogenase, specific for NADP+ |
| * | minE | 775,532 | 0 | C | T | 50.0% | ‑6.4 / 13.7 | 12 | N385N (AAC→AAT) | icd | isocitrate dehydrogenase, specific for NADP+ |
| * | minE | 775,535 | 0 | G | C | 50.0% | ‑6.4 / 14.2 | 12 | A386A (GCG→GCC) | icd | isocitrate dehydrogenase, specific for NADP+ |
| * | minE | 775,547 | 0 | C | T | 50.0% | ‑6.1 / 13.6 | 12 | T390T (ACC→ACT) | icd | isocitrate dehydrogenase, specific for NADP+ |
| * | minE | 832,300 | 0 | G | . | 50.0% | 15.4 / 18.9 | 12 | coding (758/3744 nt) | narG | nitrate reductase 1, alpha subunit |
| * | minE | 975,257 | 1 | . | A | 50.0% | 6.5 / 11.3 | 8 | coding (358/375 nt) | ydeH | conserved hypothetical protein |
| * | minE | 2,464,134 | 0 | C | T | 50.0% | ‑5.8 / 10.1 | 10 | H61Y (CAC→TAC) | atpI | ATP synthase, membrane‑bound accesory subunit |
| * | minE | 775,538 | 0 | A | G | 46.2% | ‑2.9 / 13.4 | 13 | K387K (AAA→AAG) | icd | isocitrate dehydrogenase, specific for NADP+ |
| * | minE | 2,427,776 | 1 | . | G | 33.3% | 2.8 / 10.1 | 9 | coding (705/1131 nt) | rffE | UDP‑N‑acetyl glucosamine‑2‑epimerase |
| * | minE | 2,427,776 | 3 | . | G | 33.3% | 2.8 / 10.1 | 9 | coding (705/1131 nt) | rffE | UDP‑N‑acetyl glucosamine‑2‑epimerase |