mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 15 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 5330 | 16374 (1.000) | 7 (0.000) | 7/274 | NT | 0.047% | intergenic (+599/‑558) | ampR/lacZalpha | /vntifkey=4//vntifkey=4 |
| ? | Exported | 5496 = | 13845 (0.860) | intergenic (+765/‑392) | ampR/lacZalpha | /vntifkey=4//vntifkey=4 | |||||
| * | ? | CP006881 | = 3776365 | 471 (1.250) | 4 (0.010) | 4/268 | NT | 0.89% | intergenic (+31/+3) | U712_19475/U712_19480 | Branched‑chain‑amino‑acid aminotransferase 2/putative 6‑phospho‑beta‑glucosidase |
| ? | CP006881 | 3776410 = | 440 (1.210) | coding (1287/1329 nt) | U712_19480 | putative 6‑phospho‑beta‑glucosidase | |||||
| * | ? | CP006881 | = 3720948 | 426 (1.130) | 8 (0.020) | 8/272 | NT | 1.9% | coding (557/1440 nt) | U712_19185 | Sucrose‑6‑phosphate hydrolase |
| ? | CP006881 | 3720954 = | 414 (1.120) | coding (551/1440 nt) | U712_19185 | Sucrose‑6‑phosphate hydrolase | |||||
| * | ? | CP006881 | = 3560820 | 487 (1.290) | 3 (0.010) | 3/272 | NT | 0.67% | coding (616/870 nt) | U712_18265 | Putative uncharacterized protein ywpD |
| ? | CP006881 | 3561093 = | 417 (1.130) | intergenic (+19/+28) | U712_18265/U712_18270 | Putative uncharacterized protein ywpD/Large‑conductance mechanosensitive channel | |||||
| * | ? | CP006881 | = 3540423 | 391 (1.040) | 4 (0.010) | 4/278 | NT | 1.0% | coding (221/222 nt) | U712_18140 | Uncharacterized protein ywqO |
| ? | CP006881 | 3540530 = | 386 (1.020) | coding (114/222 nt) | U712_18140 | Uncharacterized protein ywqO | |||||
| * | ? | CP006881 | = 3345668 | 412 (1.090) | 4 (0.010) | 4/278 | NT | 0.95% | coding (390/1797 nt) | U712_17190 | putative polysaccharide biosynthesis protein epsC |
| ? | CP006881 | 3345677 = | 422 (1.120) | coding (381/1797 nt) | U712_17190 | putative polysaccharide biosynthesis protein epsC | |||||
| * | ? | CP006881 | = 3303241 | 385 (1.020) | 104 (0.010) | 85/268 | NT | 1.5% | coding (80/1395 nt) | U712_16990 | Arabinose‑proton symporter |
| ? | Exported | = 5546 | 12898 (0.820) | intergenic (+815/‑342) | ampR/lacZalpha | /vntifkey=4//vntifkey=4 | |||||
| * | ? | CP006881 | 3301923 = | 340 (0.900) | 75 (0.010) +34 bp |
57/210 | NT | 1.3% | intergenic (‑295/+3) | U712_16985/U712_16990 | Central glycolytic genes regulator/Arabinose‑proton symporter |
| ? | Exported | 6207 = | 14324 (0.880) | coding (320/324 nt) | lacZalpha | /vntifkey=4 | |||||
| * | ? | CP006881 | = 2913502 | 478 (1.270) | 3 (0.010) | 3/268 | NT | 0.64% | intergenic (‑234/+18) | U712_15010/U712_15015 | 6‑carboxyhexanoate‑‑CoA ligase/Putative hydrolase YtaP |
| ? | CP006881 | 2913534 = | 467 (1.290) | coding (886/900 nt) | U712_15015 | Putative hydrolase YtaP | |||||
| * | ? | CP006881 | = 2276558 | 423 (1.120) | 4 (0.010) | 4/274 | NT | 0.94% | coding (377/558 nt) | U712_11490 | ADP‑ribose pyrophosphatase |
| ? | CP006881 | 2276563 = | 423 (1.140) | coding (372/558 nt) | U712_11490 | ADP‑ribose pyrophosphatase | |||||