mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 26 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4542682 = | 104 (1.750) | 3 (0.050) | 3/258 | NT | 2.9% | intergenic (+49/‑433) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) |
| ? | NC_000913 | 4542996 = | 103 (1.860) | intergenic (+363/‑119) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) | |||||
| * | ? | NC_000913 | = 4362565 | 61 (1.030) | 3 (0.050) | 3/270 | NT | 4.8% | noncoding (62/76 nt) | pheU | tRNA‑Phe |
| ? | NC_000913 | 4362572 = | 60 (1.030) | noncoding (55/76 nt) | pheU | tRNA‑Phe | |||||
| * | ? | NC_000913 | 4127164 = | 57 (0.960) | 3 (0.050) | 3/266 | NT | 4.9% | coding (152/213 nt) | rpmE | 50S ribosomal subunit protein L31 |
| ? | NC_000913 | 4127222 = | 61 (1.070) | coding (210/213 nt) | rpmE | 50S ribosomal subunit protein L31 | |||||
| * | ? | NC_000913 | = 3884921 | 86 (1.450) | 4 (0.070) | 4/258 | NT | 4.5% | coding (106/258 nt) | yidD | membrane protein insertion efficiency factor, UPF0161 family inner membrane protein |
| ? | NC_000913 | = 3884957 | 89 (1.600) | coding (142/258 nt) | yidD | membrane protein insertion efficiency factor, UPF0161 family inner membrane protein | |||||
| * | ? | NC_000913 | = 3873747 | 139 (2.340) | 3 (0.050) | 3/262 | NT | 2.2% | coding (728/879 nt) | dgoK | 2‑oxo‑3‑deoxygalactonate kinase |
| ? | NC_000913 | = 3873785 | 136 (2.410) | coding (690/879 nt) | dgoK | 2‑oxo‑3‑deoxygalactonate kinase | |||||
| * | ? | NC_000913 | = 3857685 | 123 (2.070) | 3 (0.050) | 3/260 | NT | 2.4% | coding (720/1494 nt) | yidJ | sulfatase/phosphatase superfamily protein |
| ? | NC_000913 | = 3857715 | 131 (2.340) | coding (690/1494 nt) | yidJ | sulfatase/phosphatase superfamily protein | |||||
| * | ? | NC_000913 | 3810233 = | 159 (2.680) | 3 (0.050) | 3/258 | NT | 2.0% | coding (409/480 nt) | coaD | pantetheine‑phosphate adenylyltransferase |
| ? | NC_000913 | 3810293 = | NA (NA) | coding (469/480 nt) | coaD | pantetheine‑phosphate adenylyltransferase | |||||
| * | ? | NC_000913 | = 3783805 | 125 (2.100) | 5 (0.090) | 4/260 | NT | 3.9% | coding (324/468 nt) | secB | protein export chaperone |
| ? | NC_000913 | = 3783825 | 127 (2.270) | coding (304/468 nt) | secB | protein export chaperone | |||||
| * | ? | NC_000913 | = 3752916 | 125 (2.100) | 3 (0.050) | 3/266 | NT | 2.4% | coding (925/975 nt) | yiaU | putative DNA‑binding transcriptional regulator |
| ? | NC_000913 | = 3752942 | 126 (2.200) | coding (951/975 nt) | yiaU | putative DNA‑binding transcriptional regulator | |||||
| * | ? | NC_000913 | 3741341 = | 120 (2.020) | 3 (0.050) | 3/266 | NT | 2.6% | coding (242/474 nt) | ysaA | putative hydrogenase, 4Fe‑4S ferredoxin‑type component |
| ? | NC_000913 | 3741376 = | 112 (1.960) | coding (207/474 nt) | ysaA | putative hydrogenase, 4Fe‑4S ferredoxin‑type component | |||||