mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 113 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4583137 | 650 (0.900) | 16 (0.020) | 8/266 | NT | 2.4% | intergenic (‑89/+112) | hsdM/hsdR | DNA methyltransferase M/endonuclease R Type I restriction enzyme |
| ? | NC_000913 | = 4583224 | 692 (1.000) | intergenic (‑176/+25) | hsdM/hsdR | DNA methyltransferase M/endonuclease R Type I restriction enzyme | |||||
| * | ? | NC_000913 | = 4542690 | 586 (0.810) | 5 (0.010) | 4/260 | NT | 0.84% | intergenic (+57/‑425) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) |
| ? | NC_000913 | = 4542986 | 635 (0.940) | intergenic (+353/‑129) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) | |||||
| * | ? | NC_000913 | 4512054 = | 883 (1.220) | 6 (0.010) | 3/258 | NT | 0.72% | coding (361/957 nt) | fecD | ferric citrate ABC transporter permease |
| ? | NC_000913 | 4512149 = | 836 (1.240) | coding (266/957 nt) | fecD | ferric citrate ABC transporter permease | |||||
| * | ? | NC_000913 | 4443452 = | 666 (0.920) | 7 (0.010) | 3/262 | NT | 1.1% | coding (1071/1734 nt) | tamA | translocation and assembly module for autotransporter export, outer membrane subunit |
| ? | NC_000913 | 4443491 = | 618 (0.900) | coding (1110/1734 nt) | tamA | translocation and assembly module for autotransporter export, outer membrane subunit | |||||
| * | ? | NC_000913 | = 4417460 | 793 (1.090) | 14 (0.020) | 6/264 | NT | 1.8% | coding (509/750 nt) | yjfP | acyl CoA esterase |
| ? | NC_000913 | = 4417479 | 758 (1.100) | coding (528/750 nt) | yjfP | acyl CoA esterase | |||||
| * | ? | NC_000913 | 4341778 = | 733 (1.010) | 11 (0.020) | 5/242 | NT | 1.9% | intergenic (‑150/‑133) | melR/melA | melibiose operon transcriptional regulator; autoregulator/alpha‑galactosidase, NAD(P)‑binding |
| ? | NC_000913 | 4341834 = | 516 (0.820) | intergenic (‑206/‑77) | melR/melA | melibiose operon transcriptional regulator; autoregulator/alpha‑galactosidase, NAD(P)‑binding | |||||
| * | ? | NC_000913 | 4317083 = | 809 (1.110) | 8 (0.010) | 4/262 | NT | 1.0% | coding (136/1137 nt) | phnM | ribophosphonate triphosphate hydrolase |
| ? | NC_000913 | 4317120 = | 797 (1.170) | coding (99/1137 nt) | phnM | ribophosphonate triphosphate hydrolase | |||||
| * | ? | NC_000913 | = 4314908 | 851 (1.170) | 6 (0.010) | 4/266 | NT | 0.71% | coding (195/759 nt) | phnP | 5‑phospho‑alpha‑D‑ribosyl 1,2‑cyclic phosphate phosphodiesterase |
| ? | NC_000913 | = 4314933 | 855 (1.230) | coding (170/759 nt) | phnP | 5‑phospho‑alpha‑D‑ribosyl 1,2‑cyclic phosphate phosphodiesterase | |||||
| * | ? | NC_000913 | = 4219847 | 665 (0.920) | 8 (0.010) | 5/254 | NT | 1.3% | coding (1252/1737 nt) | aceK | isocitrate dehydrogenase kinase/phosphatase |
| ? | NC_000913 | = 4219854 | 628 (0.950) | coding (1259/1737 nt) | aceK | isocitrate dehydrogenase kinase/phosphatase | |||||
| * | ? | NC_000913 | = 4217165 | 775 (1.070) | 4 (0.010) | 3/262 | NT | 0.56% | coding (57/1305 nt) | aceA | isocitrate lyase |
| ? | NC_000913 | = 4217212 | 691 (1.010) | coding (104/1305 nt) | aceA | isocitrate lyase | |||||