mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 88 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4592331 | 55 (0.720) | 3 (0.040) | 3/266 | NT | 5.0% | coding (675/1656 nt) | tsr | methyl‑accepting chemotaxis protein I, serine sensor receptor |
| ? | NC_000913 | = 4592353 | 62 (0.850) | coding (697/1656 nt) | tsr | methyl‑accepting chemotaxis protein I, serine sensor receptor | |||||
| * | ? | NC_000913 | 4481991 = | 110 (1.440) | 4 (0.060) | 3/264 | NT | 4.0% | coding (1847/2856 nt) | valS | valyl‑tRNA synthetase |
| ? | NC_000913 | 4482053 = | 89 (1.230) | coding (1785/2856 nt) | valS | valyl‑tRNA synthetase | |||||
| * | ? | NC_000913 | = 4447464 | 65 (0.850) | 3 (0.040) | 3/262 | NT | 4.5% | coding (3353/3780 nt) | tamB | translocation and assembly module for autotransporter export, inner membrane subunit |
| ? | NC_000913 | = 4447516 | 67 (0.930) | coding (3405/3780 nt) | tamB | translocation and assembly module for autotransporter export, inner membrane subunit | |||||
| * | ? | NC_000913 | 4442010 = | 80 (1.050) | 3 (0.040) | 3/264 | NT | 3.8% | coding (167/639 nt) | msrA | methionine sulfoxide reductase A |
| ? | NC_000913 | 4442119 = | 75 (1.040) | coding (58/639 nt) | msrA | methionine sulfoxide reductase A | |||||
| * | ? | NC_000913 | 4388385 = | 90 (1.180) | 3 (0.040) | 3/262 | NT | 3.6% | coding (986/3324 nt) | mscM | mechanosensitive channel protein, miniconductance |
| ? | NC_000913 | 4388485 = | 78 (1.090) | coding (886/3324 nt) | mscM | mechanosensitive channel protein, miniconductance | |||||
| * | ? | NC_000913 | = 4321065 | 101 (1.320) | 3 (0.040) | 3/270 | NT | 2.9% | coding (183/585 nt) | phnH | ribophosphonate triphosphate synthase subunit |
| ? | NC_000913 | = 4321100 | 102 (1.380) | coding (148/585 nt) | phnH | ribophosphonate triphosphate synthase subunit | |||||
| * | ? | NC_000913 | 4306276 = | 69 (0.910) | 3 (0.040) | 3/272 | NT | 4.3% | coding (322/1986 nt) | yjcS | metallo‑beta‑lactamase superfamily protein |
| ? | NC_000913 | 4306313 = | 66 (0.880) | coding (285/1986 nt) | yjcS | metallo‑beta‑lactamase superfamily protein | |||||
| * | ? | NC_000913 | 4267355 = | 72 (0.940) | 3 (0.040) | 3/268 | NT | 4.2% | coding (242/1194 nt) | tyrB | tyrosine aminotransferase, tyrosine‑repressible, PLP‑dependent |
| ? | NC_000913 | 4267398 = | 68 (0.930) | coding (285/1194 nt) | tyrB | tyrosine aminotransferase, tyrosine‑repressible, PLP‑dependent | |||||
| * | ? | NC_000913 | 4229987 = | 87 (1.140) | 3 (0.040) | 3/262 | NT | 3.5% | coding (156/690 nt) | pepE | peptidase E, alpha‑aspartyl dipeptidase |
| ? | NC_000913 | 4230030 = | 82 (1.140) | coding (113/690 nt) | pepE | peptidase E, alpha‑aspartyl dipeptidase | |||||
| * | ? | NC_000913 | = 4227602 | 84 (1.100) | 3 (0.040) | 3/264 | NT | 3.6% | intergenic (+91/‑129) | metH/yjbB | homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent/putative Na+/Pi‑cotransporter |
| ? | NC_000913 | = 4227665 | 83 (1.150) | intergenic (+154/‑66) | metH/yjbB | homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent/putative Na+/Pi‑cotransporter | |||||