| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 883,553 | IS30 (+) +2 bp | intergenic (‑165/‑119) | ybjG ← / → mdfA | undecaprenyl pyrophosphate phosphatase/multidrug efflux pump MdfA/Na(+):H(+) antiporter/K(+):H(+) antiporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 270541 = | NA (NA) | 260 (5.120) | 54/128 | 0.0 | 99.6% | noncoding (1/1221 nt) | IS30 | repeat region |
| ? | NC_000913 | = 883554 | 1 (0.020) | intergenic (‑166/‑119) | ybjG/mdfA | undecaprenyl pyrophosphate phosphatase/multidrug efflux pump MdfA/Na(+):H(+) antiporter/K(+):H(+) antiporter | |||||
| * | ? | NC_000913 | 883553 = | 1 (0.020) | 343 (6.750) | 54/128 | 0.0 | 99.7% | intergenic (‑165/‑120) | ybjG/mdfA | undecaprenyl pyrophosphate phosphatase/multidrug efflux pump MdfA/Na(+):H(+) antiporter/K(+):H(+) antiporter |
| ? | NC_000913 | = 1470516 | NA (NA) | noncoding (1221/1221 nt) | IS30 | repeat region | |||||
Only 100 of 343 total aligned reads displayed.
AAAGCGAATTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/883616‑883553‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCA < NC_000913/1470516‑1470454 AAAGCGAATTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACT < 1:1874119/65‑1AAAGCGAATTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACT < 1:3223819/65‑1AAAGCGAATTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACT < 1:2013559/65‑1 CGAATTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAG < 1:1462106/65‑1 CGAATTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAG < 1:1678226/65‑1 CGAATTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAG < 1:327511/65‑1 CGAATTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAG < 1:3057470/65‑1 GAATTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGA < 1:3081164/65‑1 GAATTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGA < 1:2690817/65‑1 GCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGT > 1:480891/1‑65 GCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGT < 1:3883722/65‑1 GCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGT < 1:85274/65‑1 GCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGT < 1:3526404/65‑1 GCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGT < 1:810777/65‑1 GCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTACAGCTACTGTAGATTCAATCTGT < 1:50573/65‑1 CTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTC < 1:3357699/65‑1 CTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTC < 1:693806/65‑1 AAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAAT < 1:3140997/65‑1 AAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAAT < 1:1646999/65‑1 ACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGC < 1:416071/65‑1 CCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCA > 1:3300591/1‑65 CCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCA > 1:345686/1‑65 GTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACC > 1:3888920/1‑65 TAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCC < 1:1933062/65‑1 TAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCC < 1:1519295/65‑1 TAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCC < 1:2068979/65‑1 TAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCC < 1:3794821/65‑1 TAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCC < 1:2138339/65‑1 TAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCC < 1:2165211/65‑1 TAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCC < 1:2716502/65‑1 TAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCC < 1:2788926/65‑1 TAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCC < 1:938589/65‑1 TAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCC < 1:2431151/65‑1 AGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTT < 1:3100689/65‑1 GCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTT > 1:3015668/1‑65 GCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTT > 1:1337144/1‑65 ACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCA < 1:1036024/65‑1 ACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCA > 1:3705976/1‑65 ACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCA > 1:65151/1‑65 ACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCA < 1:3163027/65‑1 ACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCA > 1:3591834/1‑65 ACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCA > 1:3962455/1‑65 ACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCA > 1:256975/1‑65 ACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCA > 1:1212611/1‑65 ACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCA < 1:1586329/65‑1 ACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCA < 1:1590582/65‑1 ACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCA < 1:1766163/65‑1 ACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCA > 1:3986223/1‑65 ACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCA > 1:844377/1‑65 CATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAA < 1:3636709/65‑1 ATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAAT < 1:3040982/65‑1 ATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAAT < 1:2891892/65‑1 TCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTA > 1:1973743/1‑65 TCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTA > 1:2475087/1‑65 TCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTA > 1:2348300/1‑65 CTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTAT > 1:1226367/1‑65 CTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTAT > 1:882801/1‑65 TACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCT < 1:3546055/65‑1 TACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCT < 1:3209805/65‑1 ACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTC > 1:1142641/1‑65 ACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTC > 1:209291/1‑65 ACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTC > 1:1858125/1‑65 ACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTC > 1:2531285/1‑65 ATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTc > 1:2707605/1‑64 ATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTT > 1:1634843/1‑65 ATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTT > 1:1409929/1‑65 ATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTT > 1:3386357/1‑65 ATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTT > 1:1452604/1‑65 ATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTT > 1:2809839/1‑65 ATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTT > 1:1948668/1‑65 ATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTT > 1:2247451/1‑65 ATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTT > 1:2280035/1‑65 TATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTC > 1:961939/1‑65 TATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTC > 1:2775959/1‑65 TACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGT < 1:2952221/65‑1 TACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGT < 1:2578580/65‑1 TACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGT < 1:42943/65‑1 CGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGT < 1:569108/65‑1 CGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGT < 1:1994646/65‑1 GTATAGCTACTGTAGATTCAATCTGTCAATGCAACAGCCCTTTCAATTATCTCTTTCGGTGTTTT > 1:449778/1‑65 GTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTctg > 1:635448/1‑62 GTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTT > 1:3249303/1‑65 GTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTT > 1:2487400/1‑65 ATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGA < 1:540489/65‑1 ATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGA < 1:297380/65‑1 AGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAAC > 1:1362252/1‑65 GCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACT > 1:2835924/1‑65 GCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACT < 1:750876/65‑1 GCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACT > 1:1895966/1‑65 GCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACT < 1:1101560/65‑1 CTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATTTCTTTCGGTGTTTTGAACTT > 1:631984/1‑65 CTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTT > 1:3753171/1‑65 CTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTT > 1:3510738/1‑65 CTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTT > 1:3271045/1‑65 CTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTT > 1:2374477/1‑65 CTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTT > 1:1293284/1‑65 TACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTC < 1:3855930/65‑1 TACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTC > 1:3408547/1‑65 TACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTC < 1:2648766/65‑1 ACTGTATATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCA > 1:3879912/1‑65 AAAGCGAATTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/883616‑883553‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCA < NC_000913/1470516‑1470454 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |