| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,720,868 | IS5 (+) +4 bp | intergenic (‑44/‑154) | slyA ← / → ydhI | DNA‑binding transcriptional dual regulator SlyA/DUF1656 domain‑containing protein YdhI |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1396044 = | NA (NA) | 71 (1.400) | 35/128 | 0.1 | 100% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 1720871 | 0 (0.000) | intergenic (‑47/‑154) | slyA/ydhI | DNA‑binding transcriptional dual regulator SlyA/DUF1656 domain‑containing protein YdhI | |||||
| * | ? | NC_000913 | = 1397238 | NA (NA) | 92 (1.810) | 42/128 | 0.0 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 1720868 = | 0 (0.000) | intergenic (‑44/‑157) | slyA/ydhI | DNA‑binding transcriptional dual regulator SlyA/DUF1656 domain‑containing protein YdhI | |||||
AACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1396107‑1396044‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAAAAGCCGCATAATATCTTAGCAAGCTAATTATAAGGAGATGAAATTGGAATCGCCACTAGG < NC_000913/1720871‑1720808 AACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCC > 1:2400951/1‑65 ACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCT > 1:918313/1‑65 ACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCT > 1:3898106/1‑65 CCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTA > 1:3792606/1‑65 CCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTA > 1:1434471/1‑65 CCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAA > 1:2700455/1‑65 CCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAA > 1:2883015/1‑65 TCTATGGCTCCAGATTACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAAAAtga > 1:2022429/1‑62 TCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAAAAGCC > 1:151855/1‑65 TCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAAAAGCC > 1:662295/1‑65 TCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAAAAGCC > 1:3161967/1‑65 TCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAAAAGCC > 1:776706/1‑65 TCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAAAAGCC > 1:539170/1‑65 TCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAAAAGCC > 1:1924750/1‑65 TCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAAAAGCC > 1:3718288/1‑65 TATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAAAAGCCGC < 1:3788788/65‑1 ATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCCCCTTCCCTAAAAGCCGCA < 1:768197/65‑1 ATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAAAAGCCGCA > 1:3375256/1‑65 ATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAAAAGCCGCA < 1:164403/65‑1 ATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAAAAGCCGCA > 1:3602637/1‑65 ATGGCTCCAGATGACAAACATGATATCATATCAGGGACTTGTTCGCACCTCCCCTAAAAGTCGCA > 1:2632183/1‑65 GGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAAAAGCCGCATA > 1:352269/1‑65 CTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAAAAGTCGCATAAT < 1:1850122/65‑1 TCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAAAAGCCGCATAATA < 1:2129735/65‑1 TCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAAAAGCCGCATAATA < 1:2875821/65‑1 TCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAAAAGCCGCATAATA < 1:880418/65‑1 CCAGATGACAAACATGATCTCATATCAGTGACTTGTTCTCTCCTTCCCTAAAAGCCGCATAATAT < 1:2620187/65‑1 ATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAAAAGCCGCATAATATCTTA < 1:3154107/65‑1 ATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAAAAGCCGCATAATATCTTA > 1:1174523/1‑65 AACATGATCTCATATCAGGGACTTGTTCGCACCTTCGCTAAAAGCCGCATAATATCTTAGCAAGC < 1:2416640/65‑1 AACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAAAAGCCGCATAATATCTTAGCAAGC < 1:871742/65‑1 CATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTA > 1:3466579/1‑65 CATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTA > 1:1687961/1‑65 ATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTAA < 1:3166371/65‑1 ATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTAA > 1:3021411/1‑65 cagTCTCATATCAGGGACTTGTTCGCACCTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTAAT < 1:564392/62‑1 TGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTAAT < 1:2777658/65‑1 TGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTAAT < 1:3740831/65‑1 TCTCATATCAGGGACTTGTTCGCACCTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTAATTAT > 1:3140847/1‑65 TCTCATATCAGGGACTTGTTCGCACCTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTAATTAT > 1:1716707/1‑65 TCATATCAGGGACTTGTTCGCACCTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTAATTATAA > 1:299725/1‑65 TCATATCAGGGACTTGTTCGCACCTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTAATTATAA > 1:2112477/1‑65 ATCAGGGACTTGTTCGCACCTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTAATTATAAGGAG > 1:1928954/1‑65 TCAGGGACTTGTTCGCACCTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTAATTATAAGGAGA > 1:2289003/1‑65 GGGACTTGTTCGCACCTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTAATTATAAGGAGATGA > 1:2994531/1‑65 GGGACTTGTTCGCACCTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTAATTATAAGGAGATGA > 1:2991667/1‑65 GGGACTTGTTCGCACCTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTAATTATAAGGAGATGA > 1:3272282/1‑65 GGGACTTGTTCGCACCTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTAATTATAAGGAGATGA > 1:1671292/1‑65 GGGACTTGTTCGCACCTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTAATTATAAGGAGATGA > 1:855329/1‑65 GGGACTTGTTCGCACCTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTAATTATAAGGAGATGA > 1:119887/1‑65 GGGACTTGTTCGCACCTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTAATTATAAGGAGATGA > 1:1142959/1‑65 CTTGTTCGCACCTTCCCTAGAAGCCGCATAATATCTTAGCAAGCTAATTATAAGGAGATGAAATT > 1:180126/1‑65 TTCGCACCTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTAATTATAAGGAGATGAAATTGGAA > 1:512870/1‑65 TCGCACCTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTAATTATAAGGAGATGAAATTGGAAT > 1:104924/1‑65 TCGCACCTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTAATTATAAGGAGATGAAATTGGAAT > 1:2937175/1‑65 TCGCACCTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTAATTATAAGGAGATGAAATTGGAAT > 1:2381181/1‑65 GCACCTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTAATTATAAGGAGATGAAATTGGAATCG < 1:3294141/65‑1 GCACCTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTAATTATAAGGAGATGAAATTGGAATCG > 1:1257206/1‑65 GCACCTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTAATTATAAGGAGATGAAATTGGAATCG > 1:1378890/1‑65 ACCTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTAATTATAAGGAGATGAAATTGGAATCGCC > 1:64454/1‑65 ACCTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTAATTATAAGGAGATGAAATTGGAATCGCC < 1:919904/65‑1 ACCTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTAATTATAAGGAGATGAAATTGGAATCGCC > 1:3728635/1‑65 ACCTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTAATTATAAGGAGATGAAATTGGAATCGCC > 1:2382703/1‑65 ACCTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTAATTATAAGGAGATGAAATTGGAATCGCC < 1:3234108/65‑1 ACCTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTAATTATAAGGAGATGAAATTGGAATCGCC < 1:3721755/65‑1 CCTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTAATTATAAGGAGATGAAATTGGAATCGCCA > 1:2918004/1‑65 CCTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTAATTATAAGGAGATGAAATTGGAATCGCCA > 1:1786555/1‑65 CTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTAATTATAAGGAGATGAAATTGGAATCGCCAC < 1:1930333/65‑1 CTTCCCTAAAAGCCGCATAATATCTTAGCAAGCTAATTATAAGGAGATGAAATTGGAATCGCCAC < 1:3038754/65‑1 aCCTAAAAGCCGCATAATATCTTAGCAAGCTAATTATAAGGAGATGAAATTGGAATCGCCACTAG < 1:1018659/64‑1 CCTAAAAGCCGCATAATATCTTAGCAAGCTAATTATAAGGAGATGAAATTGGAATCGCCACTAGG > 1:1555542/1‑65 AACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1396107‑1396044‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAAAAGCCGCATAATATCTTAGCAAGCTAATTATAAGGAGATGAAATTGGAATCGCCACTAGG < NC_000913/1720871‑1720808 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |