| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,720,868 | IS5 (+) +4 bp | intergenic (‑44/‑154) | slyA ← / → ydhI | DNA‑binding transcriptional dual regulator SlyA/DUF1656 domain‑containing protein YdhI |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1396044 = | NA (NA) | 71 (1.400) | 35/128 | 0.1 | 100% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 1720871 | 0 (0.000) | intergenic (‑47/‑154) | slyA/ydhI | DNA‑binding transcriptional dual regulator SlyA/DUF1656 domain‑containing protein YdhI | |||||
| * | ? | NC_000913 | = 1397238 | NA (NA) | 92 (1.810) | 42/128 | 0.0 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 1720868 = | 0 (0.000) | intergenic (‑44/‑157) | slyA/ydhI | DNA‑binding transcriptional dual regulator SlyA/DUF1656 domain‑containing protein YdhI | |||||
AACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1397176‑1397238‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATTGCTGCATTTGGTTACCGTCA > NC_000913/1720868‑1720930 AACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTT < 1:3477263/65‑1 ataAAGAAATGAAATGCCTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCCCCTTCCTTAGA < 1:2475553/62‑1 ATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGA < 1:1100089/65‑1 ATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGA < 1:1854059/65‑1 ATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGA < 1:2212841/65‑1 ATGAAGAAATAAAAGAACTGAGTCCGCCGAGAAGAATCTCCCCGCTTATTCGCACCTTCCTTAGA < 1:810295/65‑1 AGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAG > 1:1346120/1‑65 AGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAG > 1:3986582/1‑65 GAAATGAAATGACTGGGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGT < 1:2682116/65‑1 GAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGT < 1:667528/65‑1 GAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGT < 1:1830645/65‑1 GAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGT < 1:2068520/65‑1 GAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGT < 1:2897160/65‑1 GAAATGAAAGGCCTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCCCCTTCCTTAGAATAGT < 1:2113636/65‑1 GAAATGAAAGGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGT < 1:1413844/65‑1 GAAATAAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGT < 1:3556216/65‑1 AAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTG > 1:3554521/1‑65 AAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTG > 1:1286590/1‑65 AATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGT < 1:3782062/65‑1 AATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGT < 1:1185079/65‑1 AATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGT < 1:164103/65‑1 GAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCA < 1:3667422/65‑1 GAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCA < 1:2596258/65‑1 GAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCA < 1:81316/65‑1 GAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCA < 1:4030879/65‑1 GAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCA < 1:1792535/65‑1 GAAATGACGTAGGCAGTCGAGAAGAACTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCA < 1:3624134/65‑1 aagGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGC < 1:2441516/62‑1 AATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGC > 1:984271/1‑65 AATGACTAAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCCCCTTCCTTAGAATAGTGTGCAGC < 1:2397781/65‑1 ATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCA > 1:2106607/1‑65 ATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCA < 1:2869479/65‑1 ATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCA < 1:3026436/65‑1 TGACTGAGTCAGCCGAGAGGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAA > 1:949701/1‑65 TGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAA > 1:1486447/1‑65 GACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAAT < 1:3984056/65‑1 GACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAAT < 1:2564848/65‑1 GACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAAT < 1:577429/65‑1 GACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAAT > 1:3615715/1‑65 ACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATT > 1:1486180/1‑65 ACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATT > 1:898826/1‑65 ACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGCGCAGCAATT > 1:754156/1‑65 TGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGT > 1:3054047/1‑65 TGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGT < 1:1374614/65‑1 TGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAACTGT > 1:848608/1‑65 TCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTG > 1:222303/1‑65 TCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTG > 1:1637108/1‑65 TCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTG > 1:158496/1‑65 TCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTG < 1:1846232/65‑1 TCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTG > 1:2613566/1‑65 CAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTGC < 1:3718469/65‑1 CGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAA > 1:3514882/1‑65 GAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAA < 1:422452/65‑1 GAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAA < 1:1410444/65‑1 GAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACA < 1:1506967/65‑1 AGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAA < 1:507724/65‑1 AGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAA > 1:2431271/1‑65 AGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAA > 1:1412408/1‑65 AGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAA > 1:1471269/1‑65 AGAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAA > 1:2003913/1‑65 GAATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAAT < 1:2906314/65‑1 GAATGTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAAT < 1:166145/65‑1 ATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGT > 1:1400627/1‑65 ATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGT < 1:1332573/65‑1 ATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGT < 1:109575/65‑1 ATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGT < 1:2015230/65‑1 ATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGT < 1:3270994/65‑1 ATTTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGT < 1:1542613/65‑1 TTCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTAT < 1:2325451/65‑1 TCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATT < 1:1783723/65‑1 TCCCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATT < 1:2116553/65‑1 CCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATTGC > 1:3988537/1‑65 CCCGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATTGC < 1:1621653/65‑1 CGCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATTGCTG > 1:3489878/1‑65 gcgTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTGGTAAAACAAATGTATTGCTGC < 1:1264534/62‑1 GCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATTGCTGC < 1:401833/65‑1 GCTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATTGCTGC < 1:1356938/65‑1 CTTATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATTGCTGCA < 1:1260352/65‑1 TATTCGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATTGCTGCATT < 1:3501271/65‑1 TCGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATTGCTGCATTTGG < 1:2246507/65‑1 CGCACCTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATTGCTGCATTTGGT < 1:2345403/65‑1 ACCTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATTGCTGCATTTGGTTAC > 1:3025354/1‑65 ACCTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATTGCTGCATTTGGTTAC > 1:3551045/1‑65 ACCTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATTGCTGCATTTGGTTAC > 1:1549498/1‑65 ACCTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATTGCTGCATTTGGTTAC > 1:273454/1‑65 CCTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATTGCTGCATTTGGTTACC < 1:3295599/65‑1 CCTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATTGCTGCATTTGGTTACC > 1:3851628/1‑65 CTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATTGCTGCATTTGGTTACCG < 1:2539536/65‑1 CTTCCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATTGCTGCATTTGGTTACCG < 1:3502842/65‑1 agtCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATTGCTGCATTTGGTTACCGT < 1:2230075/62‑1 CCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATTGCTGCATTTGGTTACCGTCA > 1:2722908/1‑65 CCTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATTGCTGCATTTGGTTACCGTCA > 1:3915938/1‑65 AACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1397176‑1397238‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATTGCTGCATTTGGTTACCGTCA > NC_000913/1720868‑1720930 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |