| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,720,868 | IS5 (+) +4 bp | intergenic (‑44/‑154) | slyA ← / → ydhI | DNA‑binding transcriptional dual regulator SlyA/DUF1656 domain‑containing protein YdhI |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1396044 = | NA (NA) | 71 (1.400) | 35/128 | 0.1 | 100% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 1720871 | 0 (0.000) | intergenic (‑47/‑154) | slyA/ydhI | DNA‑binding transcriptional dual regulator SlyA/DUF1656 domain‑containing protein YdhI | |||||
| * | ? | NC_000913 | = 1397238 | NA (NA) | 92 (1.810) | 42/128 | 0.0 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 1720868 = | 0 (0.000) | intergenic (‑44/‑157) | slyA/ydhI | DNA‑binding transcriptional dual regulator SlyA/DUF1656 domain‑containing protein YdhI | |||||
Only 100 of 167 total aligned reads displayed.
ACCTAGTGGCGATTCCAATTTCATCTCCTTATAATTAGCTTGCTAAGATATTATGCGGCTTTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATTGCTGCATTTGGTTACCGTCAGACA > NC_000913/1720807‑1720934 | aCCTAGTGGCGATTTCAATTTCATCTCCTTATAATTAGCTTGCTAAGATATTATGCGGCTTTTAg > 1:732416/1‑65 (MQ=255)aCCTAGTGGCGATTCCAATTTCATCTCCTTATAATTAGCTTGCTAAGATATTATGCGGCTTTTAg > 1:3210303/1‑65 (MQ=255)aCCTAGTGGCGATTCCAATTTCATCTCCTTATAATTAGCTTGCTAAGATATTATGCGGCTTTTAg > 1:888421/1‑65 (MQ=255) atgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGa < 1:1100089‑M2/5‑1 (MQ=255) atgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGa < 1:1854059‑M2/5‑1 (MQ=255) atgaagaaataaaagaactgagtccgccgagaagaatctccccgcttattcgcaccttccTTAGa < 1:810295‑M2/5‑1 (MQ=255) ataaagaaatgaaatgcctgagtcagccgagaagaatttccccgcttattcgccccttccTTAGa < 1:2475553‑M2/5‑1 (MQ=255) cTAGTGGCGATTCCAATTTCATCTCCTTATAATTAGCTTGCTAAGATATTATGCGGCTTTTAGgt < 1:1018659‑M2/65‑3 (MQ=255) agaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGAATAg > 1:3986582‑M2/57‑65 (MQ=255) agaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGAATAg > 1:1346120‑M2/57‑65 (MQ=255) tGGCGATTCCAATTTCATCTCCTTATAATTAGCTTGCTAAGATATTATGCGGCTTTTAGggaagg > 1:1786555‑M2/1‑59 (MQ=255) tGGCGATTCCAATTTCATCTCCTTATAATTAGCTTGCTAAGATATTATGCGGCTTTTAGggaagg > 1:2918004‑M2/1‑59 (MQ=255) gaaatgaaatgactgggtcagccgagaagaatttccccgcttattcgcaccttccTTAGAATAgt < 1:2682116‑M2/10‑1 (MQ=255) gaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGAATAgt < 1:1830645‑M2/10‑1 (MQ=255) gaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGAATAgt < 1:667528‑M2/10‑1 (MQ=255) gaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGAATAgt < 1:2068520‑M2/10‑1 (MQ=255) gaaatgaaaggcctgagtcagccgagaagaatttccccgcttattcgccccttccTTAGAATAgt < 1:2113636‑M2/10‑1 (MQ=255) gaaatgaaaggactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGAATAgt < 1:1413844‑M2/10‑1 (MQ=255) gaaataaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGAATAgt < 1:3556216‑M2/10‑1 (MQ=255) ggCGATTCCAATTTCATCTCCTTATAATTAGCTTGCTAAGATATTATGCGGCTTTTAGggaaggt < 1:3234108‑M2/65‑8 (MQ=255) ggCGATTCCAATTTCATCTCCTTATAATTAGCTTGCTAAGATATTATGCGGCTTTTAGggaaggt < 1:3721755‑M2/65‑8 (MQ=255) ggCGATTCCAATTTCATCTCCTTATAATTAGCTTGCTAAGATATTATGCGGCTTTTAGggaaggt > 1:64454‑M2/1‑58 (MQ=255) aaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGAATAgtg > 1:1286590‑M2/55‑65 (MQ=255) aatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGAATAgtgt < 1:164103‑M2/12‑1 (MQ=255) aatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGAATAgtgt < 1:1185079‑M2/12‑1 (MQ=255) aatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGAATAgtgt < 1:3782062‑M2/12‑1 (MQ=255) cGATTCCAATTTCATCTCCTTATAATTAGCTTGCTAAGATATTATGCGGCTTTTAGggaaggtgc > 1:1257206‑M2/1‑56 (MQ=255) cGATTCCAATTTCATCTCCTTATAATTAGCTTGCTAAGATATTATGCGGCTTTTAGggaaggtgc > 1:1378890‑M2/1‑56 (MQ=255) gaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGAATAGTGTgca < 1:1792535‑M2/15‑1 (MQ=255) gaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGAATAGTGTgca < 1:2596258‑M2/15‑1 (MQ=255) gaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGAATAGTGTgca < 1:3667422‑M2/15‑1 (MQ=255) gaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGAATAGTGTgca < 1:4030879‑M2/15‑1 (MQ=255) gaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGAATAGTGTgca < 1:81316‑M2/15‑1 (MQ=255) gaaatgacgtaggcagtcgagaagaacttccccgcttattcgcaccttccTTAGAATAGTGTgca < 1:3624134‑M2/15‑1 (MQ=255) aTTCCAATTTCATCTCCTTATAATTAGCTTGCTAAGATATTATGCGGCTTTTAGggaaggtgcga > 1:2381181‑M2/1‑54 (MQ=255) aTTCCAATTTCATCTCCTTATAATTAGCTTGCTAAGATATTATGCGGCTTTTAGggaaggtgcga > 1:104924‑M2/1‑54 (MQ=255) aatgactaagtcagccgagaagaatttccccgcttattcgccccttccTTAGAATAGTGTgcagc < 1:2397781‑M2/17‑1 (MQ=255) atgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGAATAGTGTgcagca < 1:2869479‑M2/18‑1 (MQ=255) atgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGAATAGTGTgcagca < 1:3026436‑M2/18‑1 (MQ=255) tgactgagtcagccgagaggaatttccccgcttattcgcaccttccTTAGAATAGTGTGCAGCaa > 1:949701‑M2/47‑65 (MQ=255) gactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGAATAGTGTGCAGCAAt < 1:2564848‑M2/20‑1 (MQ=255) actgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGAATAGTGTGCAGCAAtt > 1:1486180‑M2/45‑65 (MQ=255) tgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGAATAGTGTGCAGCAATTGt < 1:1374614‑M2/23‑1 (MQ=255) tgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGAATAGTGTGCAGCAATTGt > 1:3054047‑M2/43‑65 (MQ=255) tCATCTCCTTATAATTAGCTTGCTAAGATATTATGCGGCTTTTAGggaaggtgcgaacaagtccc > 1:855329‑M2/1‑45 (MQ=255) tCATCTCCTTATAATTAGCTTGCTAAGATATTATGCGGCTTTTAGggaaggtgcgaacaagtccc > 1:1671292‑M2/1‑45 (MQ=255) tCATCTCCTTATAATTAGCTTGCTAAGATATTATGCGGCTTTTAGggaaggtgcgaacaagtccc > 1:3272282‑M2/1‑45 (MQ=255) tCATCTCCTTATAATTAGCTTGCTAAGATATTATGCGGCTTTTAGggaaggtgcgaacaagtccc > 1:2991667‑M2/1‑45 (MQ=255) tctcCTTATAATTAGCTTGCTAAGATATTATGCGGCTTTTAGggaaggtgcgaacaagtccctga > 1:2289003‑M2/1‑42 (MQ=255) tcagccgagaagaatttccccgcttattcgcaccttccTTAGAATAGTGTGCAGCAATTGTATTg > 1:222303‑M2/39‑65 (MQ=255) tcagccgagaagaatttccccgcttattcgcaccttccTTAGAATAGTGTGCAGCAATTGTATTg > 1:158496‑M2/39‑65 (MQ=255) ctcCTTATAATTAGCTTGCTAAGATATTATGCGGCTTTTAGggaaggtgcgaacaagtccctgat > 1:1928954‑M2/1‑41 (MQ=255) ttATAATTAGCTTGCTAAGATATTATGCGGCTTTTAGggaaggtgcgaacaagtccctgatatga > 1:2112477‑M2/1‑37 (MQ=255) ttATAATTAGCTTGCTAAGATATTATGCGGCTTTTAGggaaggtgcgaacaagtccctgatatga > 1:299725‑M2/1‑37 (MQ=255) cgagaagaatttccccgcttattcgcaccttccTTAGAATAGTGTGCAGCAATTGTATTGCTaaa > 1:3514882‑M2/34‑65 (MQ=255) gagaagaatttccccgcttattcgcaccttccTTAGAATAGTGTGCAGCAATTGTATTGCTaaaa < 1:1410444‑M2/33‑1 (MQ=255) ataATTAGCTTGCTAAGATATTATGCGGCTTTTAGggaaggtgcgaacaagtccctgatatgaga > 1:3140847‑M2/1‑35 (MQ=255) ataATTAGCTTGCTAAGATATTATGCGGCTTTTAGggaaggtgcgaacaagtccctgatatgaga > 1:1716707‑M2/1‑35 (MQ=255) gaagaatttccccgcttattcgcaccttccTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACa < 1:1506967‑M2/35‑1 (MQ=255) agaatttccccgcttattcgcaccttccTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACaaa > 1:2003913‑M2/29‑65 (MQ=255) agaatttccccgcttattcgcaccttccTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACaaa > 1:2431271‑M2/29‑65 (MQ=255) agaatttccccgcttattcgcaccttccTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACaaa < 1:507724‑M2/37‑1 (MQ=255) aTTAGCTTGCTAAGATATTATGCGGCTTTTAGggaaggtgcgaacaagtccctgatatgagatca < 1:2777658‑M2/65‑34 (MQ=255) aTTAGCTTGCTAAGATATTATGCGGCTTTTAGggaaggtgcgaacaagtccctgatatgagatca < 1:3740831‑M2/65‑34 (MQ=255) aTTAGCTTGCTAAGATATTATGCGGCTTTTAGggaaggtgcgaacaagtccctgatatgagactg < 1:564392‑M2/65‑34 (MQ=255) ttAGCTTGCTAAGATATTATGCGGCTTTTAGggaaggtgcgaacaagtccctgatatgagatcat > 1:3021411‑M2/1‑31 (MQ=255) gaatttccccgcttattcgcaccttccTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAAt < 1:2906314‑M2/38‑1 (MQ=255) gaatgtccccgcttattcgcaccttccTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAAt < 1:166145‑M2/38‑1 (MQ=255) atttccccgcttattcgcaccttccTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGt < 1:2015230‑M2/40‑1 (MQ=255) gCTTGCTAAGATATTATGCGGCTTTTAGcgaaggtgcgaacaagtccctgatatgagatcatgtt < 1:2416640‑M2/65‑38 (MQ=255) cccgcttattcgcaccttccTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATtgc < 1:1621653‑M2/45‑1 (MQ=255) tAAGATATTATGCGGCTTTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcat > 1:1174523‑M2/1‑22 (MQ=255) cgcttattcgcaccttccTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATtgctg > 1:3489878‑M2/19‑65 (MQ=255) gcttattcgcaccttccTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATtgctgc < 1:401833‑M2/48‑1 (MQ=255) gcgtattcgcaccttccTTAGAATAGTGTGCAGCAATTGTATTGGTAAAACAAATGTATtgctgc < 1:1264534‑M2/48‑1 (MQ=255) atatTATGCGGCTTTTAGggaaggagagaacaagtcactgatatgagatcatgtttgtcatctgg < 1:2620187‑M2/65‑48 (MQ=255) tattatGCGGCTTTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgga < 1:2129735‑M2/65‑49 (MQ=255) tattatGCGGCTTTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgga < 1:880418‑M2/65‑49 (MQ=255) attatGCGACTTTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggag < 1:1850122‑M2/65‑50 (MQ=255) cgcaccttccTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATTGCTGCATTTGGt < 1:2345403‑M2/55‑1 (MQ=255) tGCGGCTTTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccat > 1:3602637‑M2/1‑12 (MQ=255) tGCGGCTTTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccat > 1:3375256‑M2/1‑12 (MQ=255) tGCGGCTTTTAGggaaggggcgaacaagtccctgatatgagatcatgtttgtcatctggagccat < 1:768197‑M2/65‑54 (MQ=255) accttccTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATTGCTGCATTTGGTTAc > 1:3551045‑M2/8‑65 (MQ=255) accttccTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATTGCTGCATTTGGTTAc > 1:1549498‑M2/8‑65 (MQ=255) accttccTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATTGCTGCATTTGGTTAc > 1:273454‑M2/8‑65 (MQ=255) ccttccTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATTGCTGCATTTGGTTAcc < 1:3295599‑M2/59‑1 (MQ=255) ggCTTTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccataga > 1:151855‑M2/1‑9 (MQ=255) ggCTTTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccataga > 1:539170‑M2/1‑9 (MQ=255) ggCTTTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccataga > 1:3718288‑M2/1‑9 (MQ=255) ggCTTTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccataga > 1:3161967‑M2/1‑9 (MQ=255) cttccTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATTGCTGCATTTGGTTACCg < 1:3502842‑M2/60‑1 (MQ=255) agtcTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATTGCTGCATTTGGTTACCGt < 1:2230075‑M2/61‑1 (MQ=255) ccTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATTGCTGCATTTGGTTACCGTCa > 1:3915938‑M2/3‑65 (MQ=255) ttAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg > 1:2883015‑M2/1‑4 (MQ=255) ttAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg > 1:2700455‑M2/1‑4 (MQ=255) tAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg > 1:1434471‑M2/1‑3 (MQ=255) tAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg > 1:3792606‑M2/1‑3 (MQ=255) aGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggt > 1:918313‑M2/1‑2 (MQ=255) aGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggt > 1:3898106‑M2/1‑2 (MQ=255) | ACCTAGTGGCGATTCCAATTTCATCTCCTTATAATTAGCTTGCTAAGATATTATGCGGCTTTTAGAATAGTGTGCAGCAATTGTATTGCTAAAACAAATGTATTGCTGCATTTGGTTACCGTCAGACA > NC_000913/1720807‑1720934 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |