mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 788 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4627219 | 496 (1.200) | 3 (0.010) | 3/98 | NT | 0.63% | coding (707/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB, regulator of the CreBC regulon |
| ? | CP009273 | = 4627224 | 518 (1.430) | coding (712/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB, regulator of the CreBC regulon | |||||
| * | ? | CP009273 | = 4620353 | 307 (0.740) | 8 (0.020) | 4/94 | NT | 2.8% | intergenic (‑14/‑197) | yjjK/slt | putative transporter subunit of ABC superfamily: ATP‑binding component/lytic murein transglycosylase, soluble |
| ? | CP009273 | = 4620382 | 300 (0.860) | intergenic (‑43/‑168) | yjjK/slt | putative transporter subunit of ABC superfamily: ATP‑binding component/lytic murein transglycosylase, soluble | |||||
| * | ? | CP009273 | 4615686 = | 464 (1.120) | 3 (0.010) | 3/98 | NT | 0.76% | intergenic (+6/‑43) | serB/radA | 3‑phosphoserine phosphatase/DNA repair protein |
| ? | CP009273 | 4615706 = | 377 (1.040) | intergenic (+26/‑23) | serB/radA | 3‑phosphoserine phosphatase/DNA repair protein | |||||
| * | ? | CP009273 | = 4615358 | 348 (0.840) | 3 (0.010) | 3/94 | NT | 0.96% | coding (647/969 nt) | serB | 3‑phosphoserine phosphatase |
| ? | CP009273 | = 4615477 | 330 (0.950) | coding (766/969 nt) | serB | 3‑phosphoserine phosphatase | |||||
| * | ? | CP009273 | 4607956 = | NA (NA) | 6 (0.020) | 4/96 | NT | 1.9% | noncoding (23/82 nt) | REP353 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP353 (repetitive extragenic palindromic) element; contains 2 REP sequences |
| ? | CP009273 | 4607985 = | 314 (0.880) | noncoding (52/82 nt) | REP353 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP353 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
| * | ? | CP009273 | 4607857 = | 464 (1.120) | 9 (0.030) | 7/96 | NT | 2.2% | coding (718/780 nt) | deoC | 2‑deoxyribose‑5‑phosphate aldolase, NAD(P)‑linked |
| ? | CP009273 | 4607913 = | NA (NA) | coding (774/780 nt) | deoC | 2‑deoxyribose‑5‑phosphate aldolase, NAD(P)‑linked | |||||
| * | ? | CP009273 | = 4603957 | 205 (0.490) | 5 (0.010) | 4/94 | NT | 2.4% | coding (660/780 nt) | yjjV | putative DNase |
| ? | CP009273 | = 4603970 | 236 (0.680) | coding (673/780 nt) | yjjV | putative DNase | |||||
| * | ? | CP009273 | 4598414 = | 674 (1.630) | 5 (0.010) | 4/98 | NT | 0.84% | coding (413/447 nt) | rimI | ribosomal‑protein‑S18‑alanine N‑acetyltransferase |
| ? | CP009273 | 4598432 = | 584 (1.610) | coding (431/447 nt) | rimI | ribosomal‑protein‑S18‑alanine N‑acetyltransferase | |||||
| * | ? | CP009273 | 4557863 = | 486 (1.170) | 3 (0.010) | 3/98 | NT | 0.73% | coding (474/1233 nt) | mdtM | multidrug efflux system protein |
| ? | CP009273 | 4557894 = | 392 (1.080) | coding (443/1233 nt) | mdtM | multidrug efflux system protein | |||||
| * | ? | CP009273 | 4550302 = | 312 (0.750) | 3 (0.010) | 3/98 | NT | 1.1% | coding (196/684 nt) | yjiH | nucleoside recognition pore and gate family putative inner membrane transporter |
| ? | CP009273 | 4550375 = | 253 (0.700) | coding (123/684 nt) | yjiH | nucleoside recognition pore and gate family putative inner membrane transporter | |||||