| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 2,737,118 | IS1 (+) +8 bp | intergenic (+235/‑29) | bamD → / → raiA | outer membrane protein assembly factor BamD/stationary phase translation inhibitor and ribosome stability factor |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1978503 = | NA (NA) | 33 (0.950) | 26/160 | 0.4 | 100% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 2737118 = | 0 (0.000) | intergenic (+235/‑36) | bamD/raiA | outer membrane protein assembly factor BamD/stationary phase translation inhibitor and ribosome stability factor | |||||
| * | ? | NC_000913 | = 1979270 | NA (NA) | 27 (0.780) | 20/160 | 0.9 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 2737125 | 0 (0.000) | intergenic (+242/‑29) | bamD/raiA | outer membrane protein assembly factor BamD/stationary phase translation inhibitor and ribosome stability factor | |||||
AAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1978581‑1978503‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATTCACCAAGACGGGAAGACAAGAGGTAAAATTTATGACAATGAACATTACCAGCAAACAAATGGAAATTACT > NC_000913/2737118‑2737192 AAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCG < 1:232107/80‑1AAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCG < 1:778301/80‑1 AAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGA > 2:778333/1‑80 ATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATT > 1:591295/1‑81 GAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAG < 2:65945/81‑1 GCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAGAC < 2:778218/81‑1 TGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAGACGG > 2:591294/1‑81 TGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAGACGG > 2:591287/1‑81 CATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAGACGG < 2:65951/79‑1 ATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAGACGGGAA < 2:4405/81‑1 AAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAGACGGGAAGAC > 1:1013867/1‑79 AAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAGACGGGAAGAC > 1:591312/1‑79 AAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAGACGGGAAGACAAG < 2:232033/81‑1 ATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAGACGGGAAGACAAGAGGTA < 2:232050/81‑1 ATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAGACGGGAAGACAAGAGGT < 2:778229/80‑1 ATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAGACGGGAAGACAAGAGGT < 2:58293/80‑1 GGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAGACGGGAAGACAAGAGGTAAAA > 2:591299/1‑81 TATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAGACGGGAAGACAAGAGGTAAAATTTAT > 2:591297/1‑80 TATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAGACGGGAAGACAAGAGGTAAAATTTAT > 1:591301/1‑80 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAGACGGGAAGACAAGAGGTAAAATTTATGAC > 2:591318/1‑80 GAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAGACGGGAAGACAAGAGGTAAAATTTATGACAAT > 2:591317/1‑81 AACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAGACGGGAAGACAAGAGGTAAAATTTATGACAA < 2:232052/79‑1 ACATAAAACACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAGACGGGAAGACAAGAGGTAAAATTTATGACAATGA < 1:4383/81‑1 CATAAAACACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAGACGGGAAGACAAGAGGTAAAATTTATGACAATGAA > 1:591305/1‑81 AAACACTATCAATAAGTTGGAGTCATTACCGAATTCACCAAGACGGGAAGACAAGAGGTAAAATTTATGACAATGAACAT < 1:58291/80‑1 AAACACTAACAATAAGTTGGAGTCATTACCGAATTCACCAAGACGGGAAGACAAGAGGTAAAATTTATGACAATGAACAT > 2:591309/1‑80 ATAAGTTGGAGTCATTACCGAATTCACCAAGACGGGAAGACAAGAGGTAAAATTTATGACAATGAACATTACCAGCAAAC > 2:591310/1‑80 TAAGTTGGAGTCATTACCGAATTCACCAAGACGGGAAGACAAGAGGTAAAATTTATGACAATGAACATTACCAGCAAACAA < 2:232046/81‑1 AAGTTGGAGTCATTACCGAATTCACCAAGACGGGAAGACAAGAGGTAAAATTTATGACAATGAACATTACCAGCAAACAAA > 1:591321/1‑81 GTTGGAGTCATTACCGAATTCACCAAGACGGGAAGACAAGAGGTAAAATTTATGACAATGAACATTACCAGCAAACAAATG > 2:591323/1‑81 GTTGGAGTCATTACCGAATTCACCAAGACGGGAAGACAAGAGGTAAAATTTATGACAATGAACATTACCAGCAAACAAATG < 1:63075/81‑1 TGGAGTCATTACCGAATTCACCAAGACGGGAAGACAAGAGGTAAAATTTATGACAATGAACATTACCAGCAAACAAATGG > 2:591306/1‑80 ATTACCGAATTCACCAAGACGGGAAGACAAGAGGTAAAATTTATGACAATGAACATTACCAGCAAACAAATGGAAATTACT > 2:591302/1‑81 AAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1978581‑1978503‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATTCACCAAGACGGGAAGACAAGAGGTAAAATTTATGACAATGAACATTACCAGCAAACAAATGGAAATTACT > NC_000913/2737118‑2737192 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |