| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 2,737,118 | IS1 (+) +8 bp | intergenic (+235/‑29) | bamD → / → raiA | outer membrane protein assembly factor BamD/stationary phase translation inhibitor and ribosome stability factor |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1978503 = | NA (NA) | 33 (0.950) | 26/160 | 0.4 | 100% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 2737118 = | 0 (0.000) | intergenic (+235/‑36) | bamD/raiA | outer membrane protein assembly factor BamD/stationary phase translation inhibitor and ribosome stability factor | |||||
| * | ? | NC_000913 | = 1979270 | NA (NA) | 27 (0.780) | 20/160 | 0.9 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 2737125 | 0 (0.000) | intergenic (+242/‑29) | bamD/raiA | outer membrane protein assembly factor BamD/stationary phase translation inhibitor and ribosome stability factor | |||||
GACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1979191‑1979270‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGAATTCAGCATACCGTTCCTGATGTCAAAATGTGTGATGAAAATCTCATAATTTTGTCACTTTTTGTCAAC < NC_000913/2737125‑2737053 GACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCG < 2:66081/81‑1GACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCG < 1:63229/81‑1 CAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTG < 2:63230/81‑1 GCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTGAA < 1:63231/81‑1 ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTGAATTC < 1:426909/80‑1 ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTGAATTC < 1:426907/80‑1 ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTGAATTC < 2:778131/80‑1 TAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTGAATTCAG > 2:591216/1‑81 CTGGAGCACCTCAAAAACACCATCATACACTGAATCAGTAAGTTGGCAGCATCACCGTGAATTCAGCATACCGTTCCTGAT < 2:778140/81‑1 CTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTGAATTCAGCATACCGTTCCTGAT > 2:591276/1‑81 TGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTGAATTCAGCATACCGTTCCTGATG > 1:591275/1‑81 GAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTGAATTCAGCATACCGTTCCTGATGT > 1:591273/1‑80 GAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTGAATTCAGCATACCGTTCCTGATGT > 2:591274/1‑80 AGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTGAATTCAGCATACCGTTCCTGATGTCA < 2:778133/81‑1 AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTGAATTCAGCATACCGTTCCTGATGTCAAAATGT < 1:66047/79‑1 CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTGAATTCAGCATACCGTTCCTGATGTCAAAATGTGTGATGAAA < 2:58367/81‑1 ATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTGAATTCAGCATACCGTTCCTGATGTCAAAATGTGTGATGAAAAT > 1:591272/1‑81 ACACTAAATCAGTAAGTTGGCAGCATCACCGTGAATTCAGCATACCGTTCCTGATGTCAAAATGTGTGATGAAAATCTCA > 2:591271/1‑80 AAATCAGTAAGTTGGCAGCATCACCGTGAATTCAGCATACCGTTCCTGATGTCAAAATGTGTGATGAAAATCTCATAATTT > 2:591268/1‑81 AAATCAGTAAGTTGGCAGCATCACCGTGAATTCAGCATACCGTTCCTGATGTCAAAATGTGTGATGAAAATCTCATAATTT > 1:591269/1‑81 AAATCAGTAAGTTGGCAGCATCACCGTGAATTCAGCATACCGTTCCTGATGTCAAAATGTGTGATGAAAATCTCATAATTT > 1:591270/1‑81 CAGTAAGTTGGCAGCATCACCGTGAATTCAGCATACCGTTCCTGATGTCAAAATGTGTGATGAAAATCTCATAATTTTGT > 2:591267/1‑80 AGTAAGTTGGCAGCATCACCGTGAATTCAGCATACCGTTCCTGATGTCAAAATGTGTGATGAAAATCTCATAATTTTGTCA > 2:591266/1‑81 AGTAAGTTGGCAGCATCACCGTGAATTCAGCATACCGTTCCTGATGTCAAAATGTGTGATGAAAATCTCATAATTTTGTC < 1:63191/80‑1 AGTTGGCAGCATCACCGTGAATTCAGCATACCGTTCCTGATGTCAAAATGTGTGATGAAAATCTCATAATTTTGTCACTTT < 2:58385/81‑1 TTGGCAGCATCACCGTGAATTCAGCATACCGTTCCTGATGTCAAAATGTGTGATGAAAATCTCATAATTTTGTCACTTTTT < 2:58382/81‑1 CATCACCGTGAATTCAGCATACCGTTCCTGATGTCAAAATGTGTGATGAAAATCTCATAATTTTGTCACTTTTTGTCAAC > 1:591265/1‑80 GACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1979191‑1979270‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGAATTCAGCATACCGTTCCTGATGTCAAAATGTGTGATGAAAATCTCATAATTTTGTCACTTTTTGTCAAC < NC_000913/2737125‑2737053 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |