| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 3,291,610 | IS3 (–) +5 bp :: +T | coding (270‑274/1092 nt) | yraK → | putative fimbrial adhesin YraK |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 315229 = | NA (NA) | 46 (1.400) +T |
42/158 | 0.0 | 100% | noncoding (1/1255 nt) | IS3 | repeat region |
| ? | NC_000913 | 3291610 = | 0 (0.000) | coding (270/1092 nt) | yraK | putative fimbrial adhesin YraK | |||||
| * | ? | NC_000913 | = 2171428 | NA (NA) | 43 (1.290) | 37/160 | 0.1 | 100% | noncoding (1258/1258 nt) | IS3 | repeat region |
| ? | NC_000913 | = 3291614 | 0 (0.000) | coding (274/1092 nt) | yraK | putative fimbrial adhesin YraK | |||||
GATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/315307‑315229‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCA > NC_000913/3291610‑3291688 | GATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGAT < 2:349953/80‑1GATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGAT < 2:96208/80‑1GATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGAT < 2:67675/80‑1GATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGAT < 1:67676/80‑1 ATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGAT > 2:96164/1‑79 CTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACT < 1:182650/80‑1 TTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGAC < 1:96192/81‑1 TTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACAT > 2:555087/1‑81 TCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGA > 2:555118/1‑81 ATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGAC < 2:96200/80‑1 AGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGTATA > 2:555101/1‑81 AGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGAT < 1:349943/80‑1 GTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATAT < 1:54866/81‑1 TCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATAT > 2:555102/1‑80 ACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTAC < 1:54857/81‑1 ACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCA < 2:349939/81‑1 ACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTC < 2:96213/80‑1 ACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAAC < 2:67635/78‑1 ACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAAC < 2:54862/78‑1 ACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAAC < 1:349931/78‑1 GAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAAT > 1:555105/1‑80 GAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAAT > 2:555117/1‑80 AGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGA < 1:96189/81‑1 AGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATG < 1:349941/80‑1 GAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGAC < 1:349933/81‑1 GAGTCTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGA > 1:555106/1‑80 AGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGA > 1:555148/1‑79 ACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTG > 2:555122/1‑81 ACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCT < 2:182601/80‑1 CTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATAT < 2:96186/81‑1 CTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATAT > 2:555121/1‑81 TTAGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATAT > 2:555128/1‑80 AGCCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTA > 2:555116/1‑80 CCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAA < 2:349949/81‑1 CCGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATACTACAAACTCAATGACAGCCTGGATATTAAAA > 2:555112/1‑81 CGCGTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAAC < 1:96199/81‑1 GTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCAC < 2:782526/81‑1 GTGTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCA > 2:555111/1‑80 GTCCACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACAT > 1:555110/1‑81 CACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTA > 2:555104/1‑80 ACTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACA < 2:182613/81‑1 CTATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAG > 1:555167/1‑81 TATTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGG > 2:555107/1‑81 TTGCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGG < 2:54861/79‑1 GCTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAA < 2:349921/80‑1 CTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAAC < 2:54852/81‑1 CTGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAA < 2:96191/80‑1 TGGGTAAGATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAAC > 2:555125/1‑80 ATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCA < 2:555075/81‑1 ATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCA < 1:555076/81‑1 ATCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTC > 1:555129/1‑79 | GATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/315307‑315229‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCA > NC_000913/3291610‑3291688 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |