| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 3,291,610 | IS3 (–) +5 bp :: +T | coding (270‑274/1092 nt) | yraK → | putative fimbrial adhesin YraK |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 315229 = | NA (NA) | 46 (1.400) +T |
42/158 | 0.0 | 100% | noncoding (1/1255 nt) | IS3 | repeat region |
| ? | NC_000913 | 3291610 = | 0 (0.000) | coding (270/1092 nt) | yraK | putative fimbrial adhesin YraK | |||||
| * | ? | NC_000913 | = 2171428 | NA (NA) | 43 (1.290) | 37/160 | 0.1 | 100% | noncoding (1258/1258 nt) | IS3 | repeat region |
| ? | NC_000913 | = 3291614 | 0 (0.000) | coding (274/1092 nt) | yraK | putative fimbrial adhesin YraK | |||||
GTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2171352‑2171428‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGTGGTGGTAAGTACGGGGCTGACCATATAGACAAGTTTAACTGCCTTACCCGCAGAGCAGGAACAGGCGTATTGCCAG < NC_000913/3291614‑3291535 GTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCACAGT > 1:554998/1‑81 TGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCACAGTG > 2:554979/1‑81 GCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCACAGTGGT > 1:554967/1‑81 GCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCACAGTGGT < 2:182444/81‑1 GCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCACAGTGGTGGT < 1:67452/81‑1 CTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCACAGTGGTGGTAA < 2:96380/81‑1 GTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCACAGTGGTGGTAAGTAC < 1:350104/81‑1 CCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCACAGTGGTGGTAAGTACGG > 1:554993/1‑81 CCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCACAGTGGTGGTAAGTACGG > 2:554990/1‑81 CCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCACAGTGGTGGTAAGTACGG > 2:554978/1‑81 CGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCACAGTGGTGGTAAGTACGGG < 1:55066/81‑1 CGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCACAGTGGTGGTAAGTACGGG < 2:55048/81‑1 GGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCACAGTGGTGGTAAGTACGGGG > 2:555074/1‑81 GAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCACAGTGGTGGTAAGTACGGGGCTGACCATA < 1:96396/80‑1 GAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCACAGTGGTGGTAAGTACGGGGCTGACCATA > 1:555073/1‑80 AAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCACAGTGGTGGTAAGTACGGGGCTGACCATAT < 2:67441/80‑1 CAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCACAGTGGTGGTAAGTACGGGGCTGACCATATAGAC > 1:555071/1‑80 AAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCACAGTGGTGGTAAGTACGGGGCTGACCATATAGAC > 1:555072/1‑79 AGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCACAGTGGTGGTAAGTACGGGGCTGACCATATAGACAAG < 1:67442/81‑1 AACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCACAGTGGTGGTAAGTACGGGGCTGACCATATAGACAAGTT > 2:555070/1‑81 CCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCACAGTGGTGGTAAGTACGGGGCTGACCATATAGACAAGTTT > 1:555069/1‑80 CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCACAGTGGTGGTAAGTACGGGGCTGACCATATAGACAAGTTTAACT > 1:555068/1‑81 TAGGCCTGTGTCCATATTACGTGGGTAGGATCACAGTGGTGGTAAGTACGGGGCTGACCATATAGACAAGTTTAACTGCCT > 1:555065/1‑81 TAGGCCTGTGTCCATATTACGTGGGTAGGATCACAGTGGTGGTAAGTACGGGGCTGACCATATAGACAAGTTTAACTGCCT > 2:555067/1‑81 AGGCCTGTGTCCATATTACGTGGGTAGGATCACAGTGGTGGTAAGTACGGGGCTGACCATATAGACAAGTTTAACTGCCT > 2:555066/1‑80 AGGCCTGTGTCCATATTACGTGGGTAGGATCACAGTGGTGGTAAGTACGGGGCTGACCATATAGACAAGTTTAACTGCC < 2:67440/79‑1 GCCTGTGTCCATATTACGTGGGTAGGATCACAGTGGTGGTAAGTACGGGGCTGACCATATAGACAAGTTTAACTGCCTTAC > 2:555064/1‑81 TGTCCATATTACGTGGGTAGGATCACAGTGGTGGTAAGTACGGGGCTGACCATATAGACAAGTTTAACTGCCTTACCCGC < 2:182430/80‑1 TGTCCATATTACGTGGGTAGGATCACAGTGGTGGTAAGTACGGGGCTGACCATATAGACAAGTTTAACTGCCTTACCCG < 1:350105/79‑1 TCCATATTACGTGGGTAGGATCACAGTGGTGGTAAGTACGGGGCTGACCATATAGACAAGTTTAACTGCCTTACCCGCAG < 2:67443/80‑1 TCCATATTACGTGGGTAGGATCACAGTGGTGGTAAGTACGGGGCTGACCATATAGACAAGTTTAACTGCCTTACCCGCAG < 1:67439/80‑1 TCCATATTACGTGGGTAGGATCACAGTGGTGGTAAGTACGGGGCTGACCATATAGACAAGTTTAACTGCCTTACCCGCA > 1:555063/1‑79 CCATATTACGTGGGTAGGATCACAGTGGTGGTAAGTACGGGGCTGACCATATAGACAAGTTTAACTGCCTTACCCGCAGAG > 2:555062/1‑81 ATATTACGTGGGTAGGATCACAGTGGTGGTAAGTACGGGGCTGACCATATAGACAAGTTTAACTGCCTTACCCGCAGAG > 2:555061/1‑79 ATATTACGTGGGTAGGATCACAGTGGTGGTAAGTACGGGGCTGACCATATAGACAAGTTTAACTGCCTTACCCGCAGAG > 1:555060/1‑79 TTACGTGGGTAGGATCACAGTGGTGGTAAGTACGGGGCTGACCATATAGACAAGTTTAACTGCCTTACCCGCAGAGCAGG > 1:555059/1‑80 GGGTAGGATCACAGTGGTGGTAAGTACGGGGCTGACCATATAGACAAGTTTAACTGCCTTACCCGCAGAGCAGGAACAGGC > 1:555058/1‑81 GTAGGATCACAGTGGTGGTAAGTACGGGGCTGACCATATAGACAAGTTTAACTGCCTTACCCGCAGAGCAGGAACAGGCG > 2:555057/1‑80 GATCACAGTGGTGGTAAGTACGGGGCTGACCATATAGACAAGTTTAACTGCCTTACCCGCAGAGCAGGAACAGGCGTATTG > 2:555056/1‑81 ATCACAGTGGTGGTAAGTACGGGGCTGACCATATAGACAAGTTTAACTGCCTTACCCGCAGAGCAGGAACAGGCGTATTGC < 2:555055/81‑1 TCACAGTGGTGGTAAGTACGGGGCTGACCATATAGACAAGTTTAACTGCCTTACCCGCAGAGCAGGAACAGGCGTATTGC > 1:555054/1‑80 ACAGTGGTGGTAAGTACGGGGCTGACCATATAGACAAGTTTAACTGCCTTACCCGCAGAGCAGGAACAGGCGTATTGCCAG < 2:555053/81‑1 ACAGTGGTGGTAAGTACGGGGCTGACCATATAGACAAGTTTAACTGCCTTACCCGCAGAGCAGGAACAGGCGTATTGCCAG > 1:555052/1‑81 GTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2171352‑2171428‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGTGGTGGTAAGTACGGGGCTGACCATATAGACAAGTTTAACTGCCTTACCCGCAGAGCAGGAACAGGCGTATTGCCAG < NC_000913/3291614‑3291535 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |