mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 135 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6173647 = | 74 (1.190) | 3 (0.050) | 3/256 | NT | 4.0% | coding (992/1368 nt) | glmU | bifunctional N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase |
| ? | NC_002947 | 6173689 = | 74 (1.240) | coding (950/1368 nt) | glmU | bifunctional N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase | |||||
| * | ? | NC_002947 | = 6168179 | 67 (1.080) | 3 (0.050) | 3/254 | NT | 4.4% | coding (1259/1599 nt) | PP_5407 | TnsD‑like transposition protein |
| ? | NC_002947 | = 6168203 | 67 (1.130) | coding (1283/1599 nt) | PP_5407 | TnsD‑like transposition protein | |||||
| * | ? | NC_002947 | 6127246 = | 60 (0.970) | 3 (0.050) | 3/254 | NT | 5.0% | coding (639/909 nt) | PP_5375 | LysR family transcriptional regulator |
| ? | NC_002947 | 6127294 = | 57 (0.960) | coding (591/909 nt) | PP_5375 | LysR family transcriptional regulator | |||||
| * | ? | NC_002947 | 5992293 = | 84 (1.350) | 3 (0.050) | 3/244 | NT | 4.1% | coding (284/1263 nt) | opdB | proline‑specific outer membrane porin D |
| ? | NC_002947 | 5992363 = | 62 (1.090) | coding (354/1263 nt) | opdB | proline‑specific outer membrane porin D | |||||
| * | ? | NC_002947 | 5964527 = | 66 (1.060) | 3 (0.050) | 3/250 | NT | 5.0% | coding (617/900 nt) | xerC | tyrosine recombinase XerC |
| ? | NC_002947 | 5964578 = | 53 (0.910) | coding (668/900 nt) | xerC | tyrosine recombinase XerC | |||||
| * | ? | NC_002947 | = 5948052 | 75 (1.210) | 3 (0.050) | 3/254 | NT | 3.7% | coding (422/1260 nt) | rho | transcription termination factor Rho |
| ? | NC_002947 | = 5948073 | 84 (1.420) | coding (401/1260 nt) | rho | transcription termination factor Rho | |||||
| * | ? | NC_002947 | = 5883043 | 67 (1.080) | 3 (0.050) | 3/248 | NT | 4.6% | coding (151/477 nt) | PP_5156 | hypothetical protein |
| ? | NC_002947 | = 5883077 | 63 (1.090) | coding (117/477 nt) | PP_5156 | hypothetical protein | |||||
| * | ? | NC_002947 | = 5868801 | 78 (1.260) | 3 (0.050) | 3/252 | NT | 3.6% | coding (562/783 nt) | PP_5143 | membrane protein |
| ? | NC_002947 | = 5868829 | 87 (1.480) | coding (534/783 nt) | PP_5143 | membrane protein | |||||
| * | ? | NC_002947 | = 5789214 | 68 (1.100) | 3 (0.050) | 3/252 | NT | 4.5% | coding (371/1278 nt) | ynfM | efflux transporter |
| ? | NC_002947 | = 5789242 | 64 (1.090) | coding (399/1278 nt) | ynfM | efflux transporter | |||||
| * | ? | NC_002947 | = 5770531 | 97 (1.560) | 3 (0.050) | 3/256 | NT | 3.2% | coding (341/4716 nt) | PP_5060 | hypothetical protein |
| ? | NC_002947 | = 5770566 | 90 (1.510) | coding (306/4716 nt) | PP_5060 | hypothetical protein | |||||