BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	1,673,532	Δ181 bp	intergenic (‑31/‑201)	mdtJ ← / → tqsA	multidrug efflux system transporter/pheromone AI‑2 transporter

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1673532	1673712	181	124 [0]	[0] 125	mdtJ/tqsA	multidrug efflux system transporter/pheromone AI‑2 transporter

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1673531	0 (0.000)	124 (1.130)	101/298	0.0	100%	intergenic (‑30/‑382)	mdtJ/tqsA	multidrug efflux system transporter/pheromone AI‑2 transporter
*	?	NC_000913	1673713 =	0 (0.000)	124 (1.130)	101/298	0.0	100%	intergenic (‑212/‑200)	mdtJ/tqsA	multidrug efflux system transporter/pheromone AI‑2 transporter

Only 100 of 124 total aligned reads displayed.

CCAGCATTAAAATAAAGCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGCGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTA  >  NC_000913/1673387‑1673680

ccAGCATTAAAATAAAGCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattac                                                                                                                                                  >  2:673572‑M1/1‑145 (MQ=255)

  aGCATTAAAATAAAGCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaat                                                                                                                                               <  1:319760‑M1/151‑9 (MQ=255)

  aGCATTAAAATAAAGCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaat                                                                                                                                               <  1:749980‑M1/151‑9 (MQ=255)

    cATTAAAATAAAGCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaatt                                                                                                                                              >  1:788135‑M1/1‑141 (MQ=255)

      ttAAAATAAAGCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatc                                                                                                                                           >  1:471089‑M1/1‑139 (MQ=255)

        aaaaTAAAGCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccg                                                                                                                                         <  1:23804‑M1/151‑15 (MQ=255)

         aaaTAAAGCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgc                                                                                                                                        <  2:1292952‑M1/151‑16 (MQ=255)

           aTAAAGCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCACACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgc                                                                                                                                        >  1:537572‑M1/1‑134 (MQ=255)

            tAAAGCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagt                                                                                                                                     >  1:796861‑M1/1‑133 (MQ=255)

             aaaGCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagt                                                                                                                                     <  2:689883‑M1/150‑19 (MQ=255)

                gccgccATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttg                                                                                                                                 >  2:4796‑M1/1‑129 (MQ=255)

                 ccgccATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgc                                                                                                                                >  1:1620422‑M1/1‑128 (MQ=255)

                  cgccATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgct                                                                                                                               >  2:46358‑M1/1‑127 (MQ=255)

                   gccATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgctt                                                                                                                              >  1:1528413‑M1/1‑126 (MQ=255)

                     cATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttct                                                                                                                            >  1:777775‑M1/1‑124 (MQ=255)

                       tttCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcg                                                                                                                          >  2:813672‑M1/1‑122 (MQ=255)

                        ttCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcg                                                                                                                          <  2:934009‑M1/150‑30 (MQ=255)

                         tCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtc                                                                                                                        >  1:719292‑M1/1‑120 (MQ=255)

                           ccTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcat                                                                                                                      >  1:1378709‑M1/1‑118 (MQ=255)

                               aCTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcg                                                                                                                  >  2:1282794‑M1/1‑114 (MQ=255)

                               aCTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcg                                                                                                                  >  2:1529992‑M1/1‑114 (MQ=255)

                                 tGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcgg                                                                                                                 >  1:1683454‑M1/1‑112 (MQ=255)

                                    cGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatga                                                                                                             <  1:1058245‑M1/151‑43 (MQ=255)

                                     gCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgat                                                                                                            >  2:1547620‑M1/1‑108 (MQ=255)

                                          cccATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattg                                                                                                       >  1:501757‑M1/1‑103 (MQ=255)

                                            cATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtc                                                                                                     >  2:137899‑M1/1‑101 (MQ=255)

                                             aTTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcc                                                                                                    >  1:1367356‑M1/1‑100 (MQ=255)

                                                tCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctc                                                                                                  <  2:1131021‑M1/150‑54 (MQ=255)

                                                 cATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcgg                                                                                                >  2:1279265‑M1/1‑96 (MQ=255)

                                                  aTTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggt                                                                                               >  1:481622‑M1/1‑95 (MQ=255)

                                                    tGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggta                                                                                              <  2:1144933‑M1/150‑58 (MQ=255)

                                                    tGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggt                                                                                               >  1:1205154‑M1/1‑93 (MQ=255)

                                                     gACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagt                                                                                            >  2:802171‑M1/1‑92 (MQ=255)

                                                     gACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagt                                                                                            <  2:343156‑M1/151‑60 (MQ=255)

                                                     gACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtag                                                                                             <  1:1468994‑M1/150‑59 (MQ=255)

                                                       cAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttg                                                                                          >  1:447473‑M1/1‑90 (MQ=255)

                                                           gTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaac                                                                                       >  2:904391‑M1/1‑86 (MQ=255)

                                                            tACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacac                                                                                     >  2:1325700‑M1/1‑85 (MQ=255)

                                                             aCCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacac                                                                                     <  2:447143‑M1/150‑67 (MQ=255)

                                                               cGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcc                                                                                  <  1:407455‑M1/151‑70 (MQ=255)

                                                                ggTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcc                                                                                  >  2:28721‑M1/1‑81 (MQ=255)

                                                                 gTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctg                                                                                <  1:1251054‑M1/151‑72 (MQ=255)

                                                                   aaTTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctga                                                                               <  2:393450‑M1/150‑73 (MQ=255)

                                                                      ttCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgattt                                                                            <  1:7302‑M1/150‑76 (MQ=255)

                                                                      ttCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgattt                                                                            <  2:1620486‑M1/150‑76 (MQ=255)

                                                                        cTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgt                                                                          >  1:1585048‑M1/1‑73 (MQ=255)

                                                                          gTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtat                                                                        <  2:161417‑M1/150‑80 (MQ=255)

                                                                          gTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtat                                                                        <  1:1218706‑M1/150‑80 (MQ=255)

                                                                            aGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcat                                                                     >  1:1615526‑M1/1‑69 (MQ=255)

                                                                               aaTAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagc                                                                  <  1:943540‑M1/151‑86 (MQ=255)

                                                                                aTAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagct                                                                 <  1:770554‑M1/151‑87 (MQ=255)

                                                                                  aGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagctt                                                                >  2:311211‑M1/1‑63 (MQ=255)

                                                                                  aGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagctt                                                                >  1:92627‑M1/1‑63 (MQ=255)

                                                                                   gCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagctta                                                               >  2:932451‑M1/1‑62 (MQ=255)

                                                                                    ccAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaag                                                             <  1:952318‑M1/151‑91 (MQ=255)

                                                                                     cAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaaga                                                            <  2:676295‑M1/151‑92 (MQ=255)

                                                                                     cAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaaga                                                            <  1:1509873‑M1/151‑92 (MQ=255)

                                                                                      aGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaaga                                                            >  1:704990‑M1/1‑59 (MQ=255)

                                                                                      aGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaaga                                                            >  2:1641561‑M1/1‑59 (MQ=255)

                                                                                      aGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaaga                                                            >  2:233910‑M1/1‑59 (MQ=255)

                                                                                        aCCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaatt                                                         >  1:446771‑M1/1‑57 (MQ=255)

                                                                                         ccTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaatta                                                        <  1:100185‑M1/151‑96 (MQ=255)

                                                                                         ccTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaatt                                                         <  2:1396191‑M1/150‑95 (MQ=255)

                                                                                         ccTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaatt                                                         >  1:356009‑M1/1‑56 (MQ=255)

                                                                                            aataaAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaa                                                       <  1:1513823‑M1/149‑97 (MQ=255)

                                                                                             ataaAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactc                                                    <  1:964202‑M1/151‑100 (MQ=255)

                                                                                               aaaaTCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactca                                                   >  1:809540‑M1/1‑50 (MQ=255)

                                                                                                  aTCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaat                                               >  1:15506‑M1/1‑47 (MQ=255)

                                                                                                    ccAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatat                                             <  2:90739‑M1/151‑107 (MQ=255)

                                                                                                       ataaataTACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatatttt                                          <  2:292227‑M1/151‑110 (MQ=255)

                                                                                                             ataCATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcacttc                                    <  2:1347939‑M1/151‑116 (MQ=255)

                                                                                                             ataCATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcacttc                                    >  1:868271‑M1/1‑36 (MQ=255)

                                                                                                             ataCATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcactt                                     <  2:788160‑M1/150‑115 (MQ=255)

                                                                                                               aCATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcacttctt                                  >  1:299639‑M1/1‑34 (MQ=255)

                                                                                                                cATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcacttcttt                                 >  1:313033‑M1/1‑33 (MQ=255)

                                                                                                                cATTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcacttcttt                                 <  2:821824‑M1/151‑119 (MQ=255)

                                                                                                                 aTTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcacttcttta                                <  2:265743‑M1/151‑120 (MQ=255)

                                                                                                                 aTTGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcatcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcacttcttta                                <  1:1373197‑M1/151‑120 (MQ=255)

                                                                                                                   tGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcacttctttac                               <  2:579409‑M1/150‑121 (MQ=255)

                                                                                                                   tGTCCTTCTCCTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcacttctttac                               <  2:1536910‑M1/150‑121 (MQ=255)

                                                                                                                            ccTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcacttctttacctgagcggtt                     <  2:407300‑M1/151‑131 (MQ=255)

                                                                                                                            ccTGCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcacttctttacctgagcggtt                     >  1:1348852‑M1/1‑21 (MQ=255)

                                                                                                                               gCAAGAGAATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcacttctttacctgagcggtttg                   >  2:1644242‑M1/1‑18 (MQ=255)

                                                                                                                                    agaATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcacttctttacctgagcggtttgattttc             <  1:812380‑M1/151‑139 (MQ=255)

                                                                                                                                    agaATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcacttctttacctgagcggtttgattttc             <  2:821579‑M1/151‑139 (MQ=255)

                                                                                                                                     gaATTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcacttctttacctgagcggtttgattttcg            >  1:773951‑M1/1‑12 (MQ=255)

                                                                                                                                      aaTTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcacttctttacctgagcggtttgattttcgt           >  1:256500‑M1/1‑11 (MQ=255)

                                                                                                                                      aaTTATTTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcacttctttacctgagcggtttgattttcgt           <  1:448804‑M1/151‑141 (MQ=255)

                                                                                                                                       attattTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcacttctttacctgagcggtttgattttcgtt          <  1:342130‑M1/151‑142 (MQ=255)

                                                                                                                                        ttattTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcacttctttacctgagcggtttgattttcgtt          >  2:218930‑M1/1‑9 (MQ=255)

                                                                                                                                        ttattTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcacttctttacctgagcggtttgattttcgtt          >  2:661814‑M1/1‑9 (MQ=255)

                                                                                                                                         tattTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcacttctttacctgagcggtttgattttcgttat        >  2:74938‑M1/1‑8 (MQ=255)

                                                                                                                                         tattTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcacttctttacctgagcggtttgattttcgttat        >  1:998910‑M1/1‑8 (MQ=255)

                                                                                                                                         tattTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcacttctttacctgagcggtttgattttcgtta         >  1:271017‑M1/1‑8 (MQ=255)

                                                                                                                                          attTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcacttctttacctgagcggtttgattttcgttat        <  2:790441‑M1/150‑144 (MQ=255)

                                                                                                                                          attTTAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcacttctttacctgagcggtttgattttcgttat        <  2:1051292‑M1/150‑144 (MQ=255)

                                                                                                                                           ttttAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcacttctttacctgagcggtttgattttcgttat        >  2:833463‑M1/1‑6 (MQ=255)

                                                                                                                                             ttAAattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcacttctttacctgagcggtttgattttcgttatgat     <  2:1346375‑M1/150‑147 (MQ=255)

                                                                                                                                               aaattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcacttctttacctgagcggtttgattttcgttatgatgac  >  2:1141837‑M1/1‑2 (MQ=255)

                                                                                                                                               aaattacaattatccgcagtgttgcttctcgtcatcgcggatgataattgtcctcggtagttgaacacgcctgatttgtatcatagcttaagaattaactcaaaatattttcacttctttacctgagcggtttgattttcgttatgatgac  <  2:1486341‑M1/151‑150 (MQ=255)

CCAGCATTAAAATAAAGCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGCGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTA  >  NC_000913/1673387‑1673680

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`