mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 355 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6177487 = | 155 (1.660) | 4 (0.040) | 4/240 | NT | 2.6% | coding (54/861 nt) | atpG | ATP synthase subunit gamma |
| ? | NC_002947 | 6177510 = | 148 (1.650) | coding (31/861 nt) | atpG | ATP synthase subunit gamma | |||||
| * | ? | NC_002947 | = 6176372 | 161 (1.730) | 3 (0.030) | 3/236 | NT | 1.9% | coding (281/1377 nt) | atpD | ATP synthase subunit beta |
| ? | NC_002947 | = 6176446 | 164 (1.860) | coding (207/1377 nt) | atpD | ATP synthase subunit beta | |||||
| * | ? | NC_002947 | = 6174329 | 202 (2.160) | 3 (0.030) | 3/244 | NT | 1.5% | coding (366/1368 nt) | glmU | bifunctional N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase |
| ? | NC_002947 | = 6174366 | 196 (2.150) | coding (329/1368 nt) | glmU | bifunctional N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase | |||||
| * | ? | NC_002947 | = 6173352 | 195 (2.090) | 5 (0.060) | 4/240 | NT | 2.6% | coding (1343/1368 nt) | glmU | bifunctional N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase |
| ? | NC_002947 | = 6173359 | 186 (2.080) | coding (1336/1368 nt) | glmU | bifunctional N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase | |||||
| * | ? | NC_002947 | 6166392 = | 196 (2.100) | 7 (0.080) | 7/236 | NT | 3.6% | intergenic (‑95/‑585) | PP_5406/PP_5407 | transposase/TnsD‑like transposition protein |
| ? | NC_002947 | 6166419 = | 186 (2.110) | intergenic (‑122/‑558) | PP_5406/PP_5407 | transposase/TnsD‑like transposition protein | |||||
| * | ? | NC_002947 | = 6146976 | 157 (1.680) | 3 (0.030) | 3/238 | NT | 1.9% | coding (431/1023 nt) | PP_5392 | WD40/YVTN repeat‑containing protein |
| ? | NC_002947 | = 6147014 | 154 (1.730) | coding (393/1023 nt) | PP_5392 | WD40/YVTN repeat‑containing protein | |||||
| * | ? | NC_002947 | = 6122637 | 112 (1.200) | 4 (0.050) | 3/238 | NT | 3.7% | coding (1027/1446 nt) | PP_5372 | aldehyde dehydrogenase |
| ? | NC_002947 | = 6122675 | 101 (1.140) | coding (989/1446 nt) | PP_5372 | aldehyde dehydrogenase | |||||
| * | ? | NC_002947 | 6120131 = | 131 (1.400) | 3 (0.030) | 3/244 | NT | 2.3% | coding (680/1329 nt) | PP_5370 | oxidoreductase‑like protein |
| ? | NC_002947 | 6120157 = | 123 (1.350) | coding (654/1329 nt) | PP_5370 | oxidoreductase‑like protein | |||||
| * | ? | NC_002947 | 6113326 = | 93 (1.000) | 3 (0.030) | 3/236 | NT | 3.5% | coding (400/1446 nt) | clsA | cardiolipin synthase |
| ? | NC_002947 | 6113353 = | 78 (0.890) | coding (427/1446 nt) | clsA | cardiolipin synthase | |||||
| * | ? | NC_002947 | 6101142 = | 142 (1.520) | 6 (0.070) | 4/242 | NT | 4.1% | coding (238/2187 nt) | uvrD | DNA‑dependent ATPase I/helicase II |
| ? | NC_002947 | 6101164 = | 140 (1.550) | coding (260/2187 nt) | uvrD | DNA‑dependent ATPase I/helicase II | |||||