mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_pae_tpiA | = 3380606 | 110 (1.380) | 3 (0.040) | 3/260 | NT | 2.7% | intergenic (+17/‑137) | yhcB/degQ | DUF1043 family inner membrane‑anchored protein/serine endoprotease, periplasmic |
| ? | NC_000913_3_pae_tpiA | = 3380611 | 108 (1.430) | intergenic (+22/‑132) | yhcB/degQ | DUF1043 family inner membrane‑anchored protein/serine endoprotease, periplasmic | |||||
| * | ? | NC_000913_3_pae_tpiA | 2708664 = | 72 (0.910) | 3 (0.040) | 3/274 | NT | 4.1% | coding (91/957 nt) | rseB | anti‑sigma E factor, binds RseA |
| ? | NC_000913_3_pae_tpiA | 2708700 = | 68 (0.850) | coding (55/957 nt) | rseB | anti‑sigma E factor, binds RseA | |||||
| * | ? | NC_000913_3_pae_tpiA | 1293179 = | 66 (0.830) | 3 (0.040) | 3/272 | NT | 4.4% | intergenic (‑257/‑348) | hns/tdk | global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase |
| ? | NC_000913_3_pae_tpiA | 2101750 = | NA (NA) | intergenic (‑6/+145) | wbbL/insH1 | pseudogene, lipopolysaccharide biosynthesis protein/IS5 transposase and trans‑activator | |||||