Baym_M_2016: Manifold0-1mgml - Sample Meta Data
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Note: the reference genome BOP27 is a known variant of E. coli K12 MG1655 E. coli K12 MG1655.
| ALE, Flask, Isolate, Technical Replicate | Clonal or Population | ALE Sample Details | Base Media | Carbon Source(g/L) | Nitrogen Source(g/L) | Phosphorus Source(g/L) | Sulfur Source(g/L) | Calcium Source(g/L) | Supplement(g/L) | Temperature (Celsius) | Strain | Additional Strain Details | Taxonomy ID | Reference Genome |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| A0 F0 I1 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | ||
| A1 F1 I163 R2 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | ||
| A1 F1 I164 R2 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | ||
| A1 F1 I167 R2 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | ||
| A1 F1 I168 R2 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | ||
| A1 F1 I171 R2 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | ||
| A1 F1 I178 R2 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | ||
| A1 F1 I179 R2 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | ||
| A1 F1 I186 R2 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | ||
| A1 F1 I187 R2 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | ||
| A1 F1 I188 R2 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | ||
| A1 F1 I189 R2 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | ||
| A1 F1 I190 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | ||
| A1 F1 I191 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | ||
| A1 F1 I192 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | ||
| A1 F1 I193 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | ||
| A1 F2 I194 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I195 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I196 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I197 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I198 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I199 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I200 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I201 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I202 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I203 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I204 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I205 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I206 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I207 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I208 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I209 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I210 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I211 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I212 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I213 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I214 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I215 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I216 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I217 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I218 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I219 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I220 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I221 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I222 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I223 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I224 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I225 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I226 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I227 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I228 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I229 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I230 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I231 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(1000) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb |