Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A16 F6 I1 R1
|
81 |
160.8 |
7353682 |
98.1% |
7213962 |
137.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| JC |
AE015451_phaM1 |
5,681,415 |
+CGGG |
intergenic (‑133/+71) |
PP_4986 CDS (Channel protein_ hemolysin III family) ← / ← PP_4987 CDS (putative Chemotaxis protein) |
–/– |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
AE015451_phaM1 |
= 5681415 | 6 (0.040) | 67 (0.420)
+CGGG |
21/264 |
1.0 |
92.0% |
intergenic (‑133/+71) |
PP_4986 CDS (Channel protein_ hemolysin III family)/PP_4987 CDS (putative Chemotaxis protein) |
–/– |
| ? | AE015451_phaM1 |
5681416 = |
6 (0.040) | intergenic (‑134/+70) |
PP_4986 CDS (Channel protein_ hemolysin III family)/PP_4987 CDS (putative Chemotaxis protein) |
–/– |
TGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/5681282‑5681415
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTAC > AE015451_phaM1/5681416‑5681551
||||
tcCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCGTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGG < 2:3125328/137‑1
TGCAAACACTGACCTCCTGAGGTGGGCTGGGTAGCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGG < 2:943831/139‑1
TGCAAACACAGACCTCCTGAGGTGGGGTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGG < 2:1959286/139‑1
TGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGG < 1:2968438/139‑1
TGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGG < 2:1673713/139‑1
TGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGG < 2:1959632/139‑1
TGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGG < 2:488841/139‑1
TGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGG < 2:44373/139‑1
TGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGG < 2:2467531/139‑1
TGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGG < 2:3354173/139‑1
TGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCATTCATTGCCACTGCATGAACCGCCGGGG < 2:489084/139‑1
TGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCGTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGG < 2:1713277/139‑1
TGCAAACACACACCTCCGGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGG < 2:2566769/139‑1
AACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGGCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGGTTTCATTGGCACTGCATGAACCGCCGGGGCTGC > 2:978239/1‑139
AACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGGCTTGTGTCGCGAAAGGGGCCCGAAGCCGCCCCACCCTTTCATTGCCCCAGCCTGTCCCGCCGGGGCTGC > 2:376583/1‑139
AACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTTTGTCGCGAAACGGGCGCGAAGCCGCCCCAGGCTTTCATTGCCACTGCCTGTACCGCCGGGGCTGg > 2:827256/1‑138
ACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCT < 2:2652403/139‑1
ctcAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTA < 2:1622399/136‑1
CTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTA < 2:3170721/139‑1
CTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTA < 2:3481489/139‑1
CTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTA < 2:3481493/139‑1
CTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTA < 2:2256280/139‑1
CTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTA < 2:716154/139‑1
CTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTA < 2:716442/139‑1
CTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTA < 1:2326213/139‑1
CTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTA < 2:1314000/139‑1
TGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAACGGGCGCGAAGCGGCCCCAGGCTTTCATTTCCACAGCAAGAAACGCCCGGGCTGCAGCGCAGCCCTATAGCGACAAAA > 2:1203147/1‑139
TGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCCAAAGCGGCCCGAAGCGGCCCCACGCTTTCAATGCCACTGCAAGAACCGCCGGGGCTGCTTCGCACCCCTATCGCGACACAA > 2:1218423/1‑139
TGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCATTTGTCGCGAAACGGGCGCGAAGCGGCCCCAGGCTTTAATTTCCAATGCATGTACCGGCGGGGGTGCTGCGCCTCCCTATAGCGCCACAA > 2:2467926/1‑139
ATGCTGATGGCTTCGTTCTTTGTGGGAGCGGGCTTGTGTCGCGCAAGGGGCGCGAAGCGGCCCCCGGCTTTCATTGCCCCTCCCAGTACCGCCGGGGCTGCTGCGGCGCCCTATAGCGACACAAGGCCGCTCCCACTCC > 2:1351717/1‑139
ATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGGCCCAGGCTTTCAATTCCACTGCCTGAACCGCCGCGGCTGCTGCGCCCGCCTATCGCCACACAAGCCCCCACCCACACC > 2:72139/1‑139
ATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCAATGCCACAGCATGAACCGCCGGGGCTGCTGCGGCGCCCTATCGCGCCACAAGGCGCCGCCCACTCC > 2:1231879/1‑139
ATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCCCGAAGCGGGCCCAGGGTTTCCTTGCCACTGCCTGAAACGCCGCGGCTGCTGCGCCGCCCTATCGCGACACAAGGCCGCTCCCACTCC > 2:1820167/1‑139
tttgTTTGTGGTAGCGGCGTTGTGTCGCTAAAGGGGCGCGTAGCGGCCCCAGGATTTCTTTGCCACTGAATTAACCGCCGGGGCTGCGGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCC < 2:1700518/135‑1
TTGTGGGAGCGGCGTTGTGTCGCTAAAGGGGCGCGAAGGGGCCCCAGGCTTTCATTGCCACTGCTTGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGC < 2:216341/139‑1
TGTGGGTGCGGCCTTGTGTCGCGAAAGGGGCGCTAAGCGCCCCCTGGGTTAAATTGCCAGTGCTTTAACCGCCGGGGCTGGTGCGCAGCCATATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCC < 2:257526/139‑1
TGTGGGAGCGGCCTTGTGTGGCTAATGGGCCGCGAAGCGGCCCCTGGATTTCATTCCCTCTGCATGAACCGCCGGGGCTGCTGCCCAGCCATATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCC < 2:202925/139‑1
GGCCTTGTGTCGCGAATGGGGCGCGAAGCGGCCCCTGGCTTTCATTGCCACTGCATCAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCT < 2:571568/139‑1
GCCTTGTGTCGCGAATGGGGCGGGAAGCGCCCCCAGGCTTTCATTGCCACTGCTTGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTA < 2:1363343/139‑1
GTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCGGGGGCTGCTGCGCAGCCATATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAA < 2:1213594/139‑1
GTCGCTAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACGGCGGGGGCTGGTGCGCAGCCCTATCGCGACACTAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGG < 2:592775/139‑1
AAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGGTGCGCAGCCCTATCGCGACACAAGGCCGCTGCCCCTCCAGTCCACCAGGCCCTGCGCCTCACATACTAACCAAGGTCAGGTT > 1:444867/1‑139
AAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGGGGCGCCCTATAGCGACACAATGCCGCACCCACACCACACCAACACGCCCAGCGCCTCACAACCTAACCAAAGTCAGGTT > 1:3247932/1‑139
AAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCCGCCCCATCGCGCCACAAGGCCGCTCCCCAACCACACCACCACGCCCAGCGCCTCACATCAAAACCAAAGTCAGGTT > 1:3265799/1‑139
AAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTT > 2:1091734/1‑139
AAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCG < 1:1286966/113‑1
AAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCG > 2:1286966/1‑113
CGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCCGCCCTATCGCGACACAACGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCCTC > 2:3240248/1‑139
CGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTC > 2:3083587/1‑139
CGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAACGTCAGGTTGCAGATCCGCGTC > 2:1679070/1‑139
CGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCATACCAAGGTCAGGTTGCAGATCCGCGTC > 2:3240189/1‑139
CCAGGCTTTCATTGCCACTGCATGACCCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAACGCCGCTCCCACTCCAGACCACCAGGGCCTGGGCCTCACATCCTAACCAAGGTCAGGTTGGAGATCCGCCTCACGCA > 2:2503018/1‑139
CCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCg > 2:62854/1‑138
TTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCC > 2:1324521/1‑139
TTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGACAGGTTGCAGTTACGCGTCACGCACCAGCCTTaca > 2:157755/1‑136
TTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAACGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCC > 2:1324525/1‑139
TTGCCACTGCATGAACCGCCGGGGCAGCTGCGCAGCCCTATAGCGACACAACGCCGCTCCCACTCCAGACCACCACGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCC > 2:2500919/1‑139
GCATGAACCGCCGGGGGTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTAACAACCAAACCAAGGACACGTTGCACATCCGCGTCACGCACCAGCCTATCCAAAGGGAC > 2:3084788/1‑139
GCATGAACCGCCGGGGCTGCTGCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTACCCAAGGTCAGGTTGCAGAACCCCGTCACGCACAAGCCTTTCCAATGCGtc > 2:940632/1‑137
GCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGTTGCGCGTCACGCACCAGCCTTTCCAATGCGAC > 2:513507/1‑139
GCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGAC > 2:1063163/1‑139
GCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGAC > 2:1063805/1‑139
ATGACCCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCACGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCc > 2:2551985/1‑138
ATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGCCACAAGGCCGCTCCCACTCCAGAACACCAGGCCGTGCGCCTGACATCCTAACCAAGGTCAGGGTGCAGATGCCCGTCACGCACCAGCCATTCCAATGCGACCc > 2:2551695/1‑138
ATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATTCGACCc > 2:2551507/1‑138
ATGAACCGCCGGGGCTGCTGCGCAGCCCTATAGCGACACAACGCCGCACCCACTGCAGACCACCAGGCCCTGCGCCTCACATCCAAACCAAGGTGAGGTTGCAGTTCCGGGTCACGCACCAGCCTTTCCAATGCGACCA > 2:2380119/1‑139
ACCGCCGGGGGTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCACGCCCTGCGCCTCAAAAACTAACCAAGCTCAGGTTGCAGATACGCGTCACGCACCAGCCTTTCCAAATCGACCAGGTC > 1:3559378/1‑139
GGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGGCCTGCGCCTCACATCCTAAACAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTAC > 2:2508357/1‑139
GGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTAC > 2:2509076/1‑139
||||
TGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/5681282‑5681415
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTAC > AE015451_phaM1/5681416‑5681551
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
|---|
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATGCCGGCGTCGCCGTGCTCTCGGCCTATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGCGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGATCGCCCGCGCGGCGACCCTGAAGCCGATCGCCCAGGTCGCCGA > AE015451_phaM1/5701067‑5701354
|
ATGCCGGCGTCGCCGTGCTCTCGGCCTATGGCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACG < VH01111:79:AACJV3JHV:1:1310:26639:21143/153‑1 (MQ=60)
GCCGTGCTCTCGGCCTATGCCGGTCTGCGCTCGGCGGCCCTCCACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTAC > VH01111:79:AACJV3JHV:1:1108:18496:32957/1‑153 (MQ=60)
GCCGTGCTCTCGGCCTATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTAC > VH01111:79:AACJV3JHV:2:1209:67009:54994/1‑153 (MQ=60)
CGTGCTCTCGGCCTATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGA < VH01111:79:AACJV3JHV:2:1206:22265:34642/153‑1 (MQ=60)
CGTGCTCTCGGCCTATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGA < VH01111:79:AACJV3JHV:2:2302:24063:24589/153‑1 (MQ=60)
CGTGCTCTCGGCCTATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGA < VH01111:79:AACJV3JHV:2:2205:72292:35134/153‑1 (MQ=60)
CGTGCTCTCGGCCTATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGA < VH01111:79:AACJV3JHV:2:2205:69092:31897/153‑1 (MQ=60)
CGTGCTCTCGGCCTATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGA < VH01111:79:AACJV3JHV:2:2205:68789:31859/153‑1 (MQ=60)
CGTGCTCTCGGCCTATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGA < VH01111:79:AACJV3JHV:2:2113:51880:26425/153‑1 (MQ=60)
CGTGCTCTCGGCCTATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGA < VH01111:79:AACJV3JHV:2:1210:51539:45849/153‑1 (MQ=60)
CGTGCTCTCGGCCTATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGA < VH01111:79:AACJV3JHV:2:1210:51425:44979/153‑1 (MQ=60)
CGTGCTCTCGGCCTATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGA < VH01111:79:AACJV3JHV:1:2413:69149:17906/153‑1 (MQ=60)
CGTGCTCTCGGCCTATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGA < VH01111:79:AACJV3JHV:1:1411:54796:30969/153‑1 (MQ=60)
CTCTCGGCCTATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTTCTGGCCGAGGCGGGAGCGCTCAACGAGCGGAACTACGAGACG < VH01111:79:AACJV3JHV:1:1609:43321:7531/153‑1 (MQ=60)
CTCTCGGCCTATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACG < VH01111:79:AACJV3JHV:2:1111:42961:50829/153‑1 (MQ=60)
CTCTCGGCCTATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACG < VH01111:79:AACJV3JHV:2:1408:53319:54634/153‑1 (MQ=60)
GCCTATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAG > VH01111:79:AACJV3JHV:2:1511:39269:7380/1‑153 (MQ=60)
GCCTATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAG > VH01111:79:AACJV3JHV:2:2205:57030:6206/1‑153 (MQ=60)
GCCTATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAG > VH01111:79:AACJV3JHV:1:1102:33872:54350/1‑153 (MQ=60)
ATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCA > VH01111:79:AACJV3JHV:1:1305:48433:31083/1‑153 (MQ=60)
ATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCA > VH01111:79:AACJV3JHV:1:1305:50838:33184/1‑153 (MQ=60)
cggcaTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGT < VH01111:79:AACJV3JHV:1:1414:59795:28849/148‑1 (MQ=60)
CGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCGAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGT < VH01111:79:AACJV3JHV:1:2306:11168:46115/153‑1 (MQ=60)
CGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGT < VH01111:79:AACJV3JHV:2:2507:52410:6131/153‑1 (MQ=60)
CGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGT < VH01111:79:AACJV3JHV:2:1103:78295:25763/153‑1 (MQ=60)
CGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGT < VH01111:79:AACJV3JHV:1:1114:56614:38845/153‑1 (MQ=60)
CGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGT < VH01111:79:AACJV3JHV:2:1207:57125:19667/153‑1 (MQ=60)
CGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGT < VH01111:79:AACJV3JHV:1:1114:72974:34869/153‑1 (MQ=60)
CGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGT < VH01111:79:AACJV3JHV:1:1114:75038:32427/153‑1 (MQ=60)
GCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTG < VH01111:79:AACJV3JHV:1:1205:56595:15653/153‑1 (MQ=60)
GCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTG < VH01111:79:AACJV3JHV:2:1211:44457:12378/153‑1 (MQ=60)
CGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGG < VH01111:79:AACJV3JHV:2:1601:33607:20727/153‑1 (MQ=60)
CGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGG < VH01111:79:AACJV3JHV:2:1507:75511:28546/153‑1 (MQ=60)
AACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAAT < VH01111:79:AACJV3JHV:2:2207:76477:20954/153‑1 (MQ=60)
AACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAAT < VH01111:79:AACJV3JHV:2:1509:26809:5222/153‑1 (MQ=60)
AACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAAT < VH01111:79:AACJV3JHV:1:2507:46048:45547/153‑1 (MQ=60)
AACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAAT < VH01111:79:AACJV3JHV:1:2407:14880:24646/153‑1 (MQ=60)
CGTTTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTC > VH01111:79:AACJV3JHV:1:1202:9294:16183/1‑153 (MQ=60)
CGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGATGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAATTCCAAGGTAAACTGACCTAGGGATTTTAATTC < VH01111:79:AACJV3JHV:1:2514:63298:50904/153‑1 (MQ=60)
CGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTC > VH01111:79:AACJV3JHV:2:2106:50611:49579/1‑153 (MQ=60)
CGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTC < VH01111:79:AACJV3JHV:1:2514:63601:51169/153‑1 (MQ=60)
CGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTC > VH01111:79:AACJV3JHV:1:1213:42620:22431/1‑153 (MQ=60)
CGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTC > VH01111:79:AACJV3JHV:2:2109:15486:39223/1‑153 (MQ=60)
CGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTC > VH01111:79:AACJV3JHV:2:1105:51596:30571/1‑153 (MQ=60)
CGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTC > VH01111:79:AACJV3JHV:1:2312:67255:42101/1‑153 (MQ=60)
CGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTC > VH01111:79:AACJV3JHV:2:1109:11093:47705/1‑153 (MQ=60)
CGTCTACGTCAACGCCAAGAGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGTAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTC > VH01111:79:AACJV3JHV:1:2313:39780:12283/1‑153 (MQ=60)
GTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCA > VH01111:79:AACJV3JHV:2:2602:17758:14574/1‑153 (MQ=60)
GTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCA > VH01111:79:AACJV3JHV:1:2113:43718:21106/1‑153 (MQ=60)
TCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAG < VH01111:79:AACJV3JHV:1:1601:55118:20310/153‑1 (MQ=60)
GCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTC > VH01111:79:AACJV3JHV:1:1302:36769:38125/1‑153 (MQ=60)
GCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTC > VH01111:79:AACJV3JHV:1:1603:66024:25498/1‑153 (MQ=60)
GCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTC > VH01111:79:AACJV3JHV:2:2103:45328:28659/1‑153 (MQ=60)
GCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTC > VH01111:79:AACJV3JHV:2:2510:33001:35039/1‑153 (MQ=60)
GGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTA < VH01111:79:AACJV3JHV:2:2304:18761:2628/153‑1 (MQ=60)
CCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATG < VH01111:79:AACJV3JHV:2:1403:30729:7285/153‑1 (MQ=60)
CCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATG < VH01111:79:AACJV3JHV:2:2511:36693:38845/153‑1 (MQ=60)
CCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATG < VH01111:79:AACJV3JHV:2:2511:18440:35096/153‑1 (MQ=60)
CCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATG < VH01111:79:AACJV3JHV:2:1403:33910:10845/153‑1 (MQ=60)
TCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCC < VH01111:79:AACJV3JHV:1:1313:26014:6017/153‑1 (MQ=60)
TCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCC > VH01111:79:AACJV3JHV:2:2608:10051:32692/1‑153 (MQ=60)
ACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGA < VH01111:79:AACJV3JHV:2:2603:47903:53498/153‑1 (MQ=60)
ACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGA < VH01111:79:AACJV3JHV:1:1407:54209:30231/153‑1 (MQ=60)
ACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGA < VH01111:79:AACJV3JHV:2:1201:74716:41079/153‑1 (MQ=60)
ACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGA < VH01111:79:AACJV3JHV:2:1211:56178:16335/153‑1 (MQ=60)
CCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGAT < VH01111:79:AACJV3JHV:1:1410:24537:1587/153‑1 (MQ=60)
CCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGAT < VH01111:79:AACJV3JHV:1:2502:34592:48860/153‑1 (MQ=60)
CCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGAT < VH01111:79:AACJV3JHV:1:2502:34648:48689/153‑1 (MQ=60)
GCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATAT < VH01111:79:AACJV3JHV:2:1604:67198:11147/153‑1 (MQ=60)
GCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATAT < VH01111:79:AACJV3JHV:2:1604:61385:11204/153‑1 (MQ=60)
GCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATAT < VH01111:79:AACJV3JHV:2:1604:70171:13249/153‑1 (MQ=60)
CTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAG < VH01111:79:AACJV3JHV:1:1313:13270:49163/153‑1 (MQ=60)
CTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAG < VH01111:79:AACJV3JHV:1:2114:70133:10371/153‑1 (MQ=60)
CTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAG < VH01111:79:AACJV3JHV:1:1313:13100:49295/153‑1 (MQ=60)
TTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGA < VH01111:79:AACJV3JHV:2:1403:32357:35645/153‑1 (MQ=60)
TTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGA < VH01111:79:AACJV3JHV:2:1403:32357:35797/153‑1 (MQ=60)
TCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAACCTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGAT > VH01111:79:AACJV3JHV:2:2101:44002:49977/1‑153 (MQ=60)
TCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCAGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCCAGAT > VH01111:79:AACJV3JHV:1:1501:9256:44316/1‑153 (MQ=60)
CGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGATCGCCCGCGCGG > VH01111:79:AACJV3JHV:1:2407:30445:55845/1‑153 (MQ=60)
GAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGATCGCCCGCGCGGCGACCCTGN > VH01111:79:AACJV3JHV:2:2413:25749:31310/1‑153 (MQ=60)
GAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGATCGCCCGCGCGGCGACCCTGN > VH01111:79:AACJV3JHV:2:2413:26544:30666/1‑153 (MQ=60)
GAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGATCGCCCGCGCGGCGACCCTGN > VH01111:79:AACJV3JHV:2:2413:26260:31556/1‑153 (MQ=60)
GAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGATCGCCCGCGCGGCGACCCTGA > VH01111:79:AACJV3JHV:2:2205:47089:29966/1‑153 (MQ=60)
GAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGATCGCCCGCGCGGCGACCCTGA > VH01111:79:AACJV3JHV:2:2308:40083:33903/1‑153 (MQ=60)
CTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGATCGCCCGCGCGGCGACCCTGAAGC < VH01111:79:AACJV3JHV:1:2512:13213:31310/153‑1 (MQ=60)
CTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGATCGCCCGCGCGGCGACCCTGAAGC < VH01111:79:AACJV3JHV:2:1401:30464:41855/153‑1 (MQ=60)
TGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGATCGCCCGCGCGGCGACCCTGAAGCC > VH01111:79:AACJV3JHV:2:1108:14634:45490/1‑153 (MQ=60)
AGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAACCTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGTTCGCCCGCGCGGCGACCCTGAAGCCGATCGCCCAGGTGGCCGA > VH01111:79:AACJV3JHV:1:1508:66441:39772/1‑153 (MQ=60)
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ATGCCGGCGTCGCCGTGCTCTCGGCCTATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGCGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGATCGCCCGCGCGGCGACCCTGAAGCCGATCGCCCAGGTCGCCGA > AE015451_phaM1/5701067‑5701354
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
