C1 ALE: ePUMA-Xa Tryptophan PALE ALE
Stats |
Metadata |
Mutations |
Converged Mutations |
Fixed Mutations |
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Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate | Predicted Mutations | Mean Coverage | Total Reads | Percent Mapped | Mapped Reads | Average Read Length |
|---|---|---|---|---|---|---|
| A14 F6 I1 R1 | 78 | 2874.5 | 178397650 | 99.0% | 176613673 | 98.9 |
Breseq alignment
| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AE015451_phaM1 | 5,701,209 | C→A | intergenic (+1955/‑2050) | PP_5002 CDS (conserved protein of unknown function) → / → PP_5009 CDS (conserved protein of unknown function) | –/– |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451_phaM1 | 5,701,209 | 0 | C | A | 99.9% | 7673.8 / NA | 2491 | intergenic (+1955/‑2050) | PP_5002 CDS (conserved protein of unknown function)/PP_5009 CDS (conserved protein of unknown function) | –/– |
| Reads supporting (aligned to +/- strand): ref base C (2/0); major base A (997/1489); minor base G (0/3); total (999/1492) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.79e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 2594 total aligned reads displayed.
ATGCCGGCGTCGCCGTGCTCTCGGCCTATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGCGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGATCGCCCGCGCGGCGACCCTGAAGCCG > AE015451_phaM1/5701067‑5701337 | cccTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGgagcgc > 5:59764250/1‑99 (MQ=255) ccTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCt > 6:40842062/1‑99 (MQ=255) tCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCa < 5:29457780/99‑1 (MQ=255) tCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCa > 6:19313985/1‑99 (MQ=255) cAACTTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCaa < 6:86845538/99‑1 (MQ=255) cAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCaa > 5:24774619/1‑99 (MQ=255) cGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGa > 5:21154252/1‑99 (MQ=255) cTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCg > 5:13893105/1‑99 (MQ=255) cTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCg > 5:67821034/1‑99 (MQ=255) tACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCgg < 5:77869780/99‑1 (MQ=255) tACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCgg < 5:4317999/99‑1 (MQ=255) aCGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACg < 5:36498317/99‑1 (MQ=255) aCGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACg < 6:52775010/99‑1 (MQ=255) cGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACga > 5:35103822/1‑99 (MQ=255) gCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACgag < 6:85112397/99‑1 (MQ=255) ccAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACgaga < 6:43760331/99‑1 (MQ=255) ccAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACgaga > 3:121111/1‑99 (MQ=255) cAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGAc > 5:66262464/1‑99 (MQ=255) cAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGAc < 5:23029459/99‑1 (MQ=255) aaGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACg < 5:5805438/99‑1 (MQ=255) aGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACgg < 6:32118596/99‑1 (MQ=255) gggCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGNGGATCTACGAGACGGt > 5:79974133/1‑99 (MQ=255) ggCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTg < 5:81338564/99‑1 (MQ=255) ggCCTCGACGACCGCGCCTCCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTg > 6:58198789/1‑99 (MQ=255) gCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGa < 6:74824791/99‑1 (MQ=255) ccTCGATGACCGCGCCTGCGCCGAGGAGCGGCTGCAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGaa < 5:74535618/99‑1 (MQ=255) tCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGt < 5:17719731/99‑1 (MQ=255) tCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGt < 5:32966256/99‑1 (MQ=255) cgacgaCCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGAt < 6:72598421/81‑1 (MQ=255) cgacgaCCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTc > 5:46239884/1‑99 (MQ=255) cgacgaCCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTc > 6:3517972/1‑99 (MQ=255) gacgacCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTcc < 6:42199048/99‑1 (MQ=255) gacCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAg < 6:45284122/99‑1 (MQ=255) gacCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCGGTTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAg < 6:59843638/99‑1 (MQ=255) acCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAgg > 5:19199891/1‑99 (MQ=255) acCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAgg < 6:32967539/99‑1 (MQ=255) acCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAgg < 6:30780779/99‑1 (MQ=255) ccGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGt < 6:61555580/99‑1 (MQ=255) ccGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGt > 6:68417340/1‑99 (MQ=255) gcgcCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTaa > 5:55679557/1‑99 (MQ=255) cgcCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTaaa < 6:79723385/99‑1 (MQ=255) gcCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAAc < 5:7095888/99‑1 (MQ=255) cTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTg > 5:62932409/1‑99 (MQ=255) cTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTg < 6:12631072/99‑1 (MQ=255) tCGCCGATGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGAc < 6:23675166/99‑1 (MQ=255) tCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGAc < 5:69612570/99‑1 (MQ=255) tCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGAc < 6:66419005/99‑1 (MQ=255) cGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAg < 5:44461330/99‑1 (MQ=255) cGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGAt > 1:119945/1‑149 (MQ=255) aggagCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGcag < 6:64867118/59‑3 (MQ=39) aggagCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAggg > 5:39788210/1‑99 (MQ=255) aggagCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAggg < 6:16398755/99‑1 (MQ=255) ggagCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGa > 6:47689970/1‑99 (MQ=255) gagCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGAt < 5:9504563/99‑1 (MQ=255) gagCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGAt < 5:26122203/99‑1 (MQ=255) gagCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGAt < 5:15611320/99‑1 (MQ=255) gagCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGAt > 6:82311309/1‑99 (MQ=255) agCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGAtt < 5:64362847/99‑1 (MQ=255) agCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGAtt < 6:25133240/99‑1 (MQ=255) gCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGAttt < 6:56456513/99‑1 (MQ=255) cGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGAtttt > 5:84688064/1‑99 (MQ=255) ggCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTa < 6:20630423/99‑1 (MQ=255) ggCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTa < 5:4776126/99‑1 (MQ=255) cTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTATGGATTTTAAt < 5:78935342/99‑1 (MQ=255) cTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAAt < 6:14986053/99‑1 (MQ=255) cTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAAt < 5:49609667/99‑1 (MQ=255) gAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTc < 5:11189064/99‑1 (MQ=255) aGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCAt < 6:17906487/99‑1 (MQ=255) aGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCAt < 5:6157519/99‑1 (MQ=255) ggAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCAtt < 5:56754020/99‑1 (MQ=255) aGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAg < 5:30598732/99‑1 (MQ=255) gCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGc < 5:76396576/99‑1 (MQ=255) cTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCa > 6:39518742/1‑99 (MQ=255) gAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGa > 6:9075522/1‑99 (MQ=255) gAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGa > 6:83895901/1‑99 (MQ=255) gAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGa < 5:50852299/99‑1 (MQ=255) gaGGCATGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCGTTAGCAGGAg > 6:77825038/2‑99 (MQ=255) aaGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAg > 6:50093010/1‑99 (MQ=255) gCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCt < 5:83012988/99‑1 (MQ=255) gCCTGCGGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCt < 6:11259521/99‑1 (MQ=255) ccTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCtt > 5:14845625/1‑99 (MQ=255) ccTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCtt < 6:54471844/99‑1 (MQ=255) ccTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCtt < 6:62538403/99‑1 (MQ=255) ctgctgGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACTAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCttt < 5:86248825/99‑1 (MQ=255) ctgctgGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCttt < 5:38612138/99‑1 (MQ=255) ctgctgGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCttt > 6:37973058/1‑99 (MQ=255) gctgGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGt < 5:2804681/99‑1 (MQ=255) gctgGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGt > 5:12442754/1‑99 (MQ=255) gctgGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGt < 6:2697648/99‑1 (MQ=255) tgGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTAt < 6:76703035/99‑1 (MQ=255) ggCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATg < 6:36225908/99‑1 (MQ=255) ggCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATg < 6:22188509/99‑1 (MQ=255) gCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGc > 5:54304100/1‑99 (MQ=255) ccGAGGCTGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGcc > 5:52244458/1‑99 (MQ=255) ccGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTCGCAGGAGTCTTTGTATGcc > 5:42006715/1‑99 (MQ=255) ccGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGcc > 6:71057062/1‑99 (MQ=255) aGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTc < 5:72987012/99‑1 (MQ=255) aGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTc > 5:27315824/1‑99 (MQ=255) gcgggagCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAg < 6:5110781/99‑1 (MQ=255) gcgggagCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAg < 6:2939389/99‑1 (MQ=255) | ATGCCGGCGTCGCCGTGCTCTCGGCCTATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGCGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGATCGCCCGCGCGGCGACCCTGAAGCCG > AE015451_phaM1/5701067‑5701337 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
ATCTCGGATGCCGGCGTCGCCGTGCTCTCGGCCTATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGCGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGATCGCCCGCGCGGCGACCCTGAAGCCGAT > AE015451_phaM1/5701060‑5701339 | CGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGA > LH00444:96:22JGLYLT3:3:1112:22525:5166/1‑101 (MQ=60) CGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGA < LH00444:96:22JGLYLT3:3:1269:9571:18288/101‑1 (MQ=60) NGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGTCCGAGGCGGGAGCG > LH00444:96:22JGLYLT3:3:2102:29515:16958/1‑101 (MQ=60) GGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGC > LH00444:96:22JGLYLT3:3:2249:11633:3083/1‑101 (MQ=60) GGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGAGAGCGC > LH00444:96:22JGLYLT3:3:2111:3635:20980/1‑101 (MQ=60) GCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCT < LH00444:96:22JGLYLT3:3:1257:9830:29215/101‑1 (MQ=60) CCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCA > LH00444:96:22JGLYLT3:3:1113:27657:7617/1‑101 (MQ=60) CCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCA > LH00444:96:22JGLYLT3:3:2169:34369:20050/1‑101 (MQ=60) CTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAA > LH00444:96:22JGLYLT3:3:2210:5965:1881/1‑101 (MQ=60) TCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAAC < LH00444:96:22JGLYLT3:3:2137:22275:5438/101‑1 (MQ=60) CAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACG > LH00444:96:22JGLYLT3:3:1104:23459:27357/1‑101 (MQ=60) CAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACG > LH00444:96:22JGLYLT3:3:2259:2442:16862/1‑101 (MQ=60) CAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACG < LH00444:96:22JGLYLT3:3:2131:15581:3099/101‑1 (MQ=60) AACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGA > LH00444:96:22JGLYLT3:3:2215:50448:21348/1‑101 (MQ=60) AACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGA > LH00444:96:22JGLYLT3:3:1126:20491:25802/1‑101 (MQ=60) ACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAG < LH00444:96:22JGLYLT3:3:2109:36570:19249/101‑1 (MQ=60) GTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCG > LH00444:96:22JGLYLT3:3:1103:23255:3868/1‑101 (MQ=60) GTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCG > LH00444:96:22JGLYLT3:3:1125:7500:20243/1‑101 (MQ=60) GTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCG < LH00444:96:22JGLYLT3:3:2154:1786:21204/101‑1 (MQ=60) CTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGA > LH00444:96:22JGLYLT3:3:1248:30671:28542/1‑101 (MQ=60) CTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGA > LH00444:96:22JGLYLT3:3:1270:31392:14058/1‑101 (MQ=60) TACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGAT < LH00444:96:22JGLYLT3:3:1266:50763:21605/101‑1 (MQ=60) ACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATC > LH00444:96:22JGLYLT3:3:1151:3515:12792/1‑101 (MQ=60) ACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATC < LH00444:96:22JGLYLT3:3:1111:11947:8562/101‑1 (MQ=60) CGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGTGAGCGCTCAACGAGCGGATCT < LH00444:96:22JGLYLT3:3:2282:28304:3900/101‑1 (MQ=60) CGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCT > LH00444:96:22JGLYLT3:3:2126:21203:25850/1‑101 (MQ=60) TCAACGCCAATGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTAC < LH00444:96:22JGLYLT3:3:2140:14509:15500/101‑1 (MQ=60) TCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTAC < LH00444:96:22JGLYLT3:3:2115:39704:26443/101‑1 (MQ=60) TCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTAC < LH00444:96:22JGLYLT3:3:1144:15748:4669/101‑1 (MQ=60) CAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGTGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCGCAACGAGCGGATCGACG < LH00444:96:22JGLYLT3:3:1162:31050:13209/101‑1 (MQ=60) CAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACG < LH00444:96:22JGLYLT3:3:1128:50818:26091/101‑1 (MQ=60) CAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACG < LH00444:96:22JGLYLT3:3:2255:40037:24360/101‑1 (MQ=60) CAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACG < LH00444:96:22JGLYLT3:3:1148:45779:24697/101‑1 (MQ=60) CAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGATGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACG < LH00444:96:22JGLYLT3:3:1108:34314:1080/101‑1 (MQ=60) ACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAG < LH00444:96:22JGLYLT3:3:2161:13418:15372/101‑1 (MQ=60) CGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGA > LH00444:96:22JGLYLT3:3:2135:16275:9556/1‑101 (MQ=60) CGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGA < LH00444:96:22JGLYLT3:3:2145:43393:18993/101‑1 (MQ=60) CGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGA > LH00444:62:22GH52LT3:8:2107:49468:3532/1‑101 (MQ=60) TCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGAC < LH00444:96:22JGLYLT3:3:2248:23745:16638/101‑1 (MQ=60) GCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAncagatcggaagagcacac > LH00444:96:22JGLYLT3:3:2249:42700:1000/1‑82 (MQ=60) GCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGAC < LH00444:96:22JGLYLT3:3:2226:46630:29343/101‑1 (MQ=60) GCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGAC > LH00444:96:22JGLYLT3:3:1212:10699:2170/1‑101 (MQ=60) GCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGAC < LH00444:96:22JGLYLT3:3:2162:11217:20916/101‑1 (MQ=60) CCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACG < LH00444:96:22JGLYLT3:3:2113:45640:9043/101‑1 (MQ=60) CCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACG < LH00444:96:22JGLYLT3:3:2109:5096:14763/101‑1 (MQ=60) CCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACG < LH00444:96:22JGLYLT3:3:2183:24051:27805/101‑1 (MQ=60) CAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGG > LH00444:96:22JGLYLT3:3:2275:8674:2090/1‑101 (MQ=60) AAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGT > LH00444:96:22JGLYLT3:3:1209:36662:15019/1‑101 (MQ=60) AAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGT < LH00444:96:22JGLYLT3:3:1142:51243:11575/101‑1 (MQ=60) AAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGT > LH00444:96:22JGLYLT3:3:1123:28822:18384/1‑101 (MQ=60) AAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGT < LH00444:96:22JGLYLT3:3:1121:46408:25786/101‑1 (MQ=60) AAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGT < LH00444:96:22JGLYLT3:3:2278:30791:17054/101‑1 (MQ=60) AGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTT > LH00444:58:22357VLT4:2:2124:33086:7822/1‑151 (MQ=60) AGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTG > LH00444:96:22JGLYLT3:3:1227:47637:19554/1‑101 (MQ=60) GGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAA < LH00444:96:22JGLYLT3:3:1109:48747:22470/101‑1 (MQ=60) GGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAA < LH00444:96:22JGLYLT3:3:1132:18531:6319/101‑1 (MQ=60) GCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAG < LH00444:96:22JGLYLT3:3:2273:7463:14859/101‑1 (MQ=60) GCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAG > LH00444:96:22JGLYLT3:3:2245:37938:6335/1‑101 (MQ=60) CCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGT < LH00444:96:22JGLYLT3:3:1210:8739:18640/101‑1 (MQ=60) CCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGT > LH00444:96:22JGLYLT3:3:2207:40028:20884/1‑101 (MQ=60) CTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTAgatcggaagagcaca > LH00444:96:22JGLYLT3:3:1122:49838:18977/1‑86 (MQ=60) TCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCC > LH00444:96:22JGLYLT3:3:2168:42922:2346/1‑101 (MQ=60) CGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCA > LH00444:96:22JGLYLT3:3:1161:40296:22534/1‑101 (MQ=60) ACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAG < LH00444:96:22JGLYLT3:3:2132:25197:9091/101‑1 (MQ=60) CGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGG < LH00444:96:22JGLYLT3:3:1255:3876:18897/101‑1 (MQ=60) CGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGG > LH00444:96:22JGLYLT3:3:1207:25003:14491/1‑101 (MQ=60) CGACCGCGCCTTCGCCGAGGAGCGGATGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGG > LH00444:96:22JGLYLT3:3:1146:39760:14138/1‑101 (MQ=60) GACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGT > LH00444:96:22JGLYLT3:3:2222:17366:11286/1‑101 (MQ=60) GACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGT > LH00444:96:22JGLYLT3:3:1265:34480:10245/1‑101 (MQ=60) GACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGT < LH00444:96:22JGLYLT3:3:1273:43070:19105/101‑1 (MQ=60) ACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTA > LH00444:96:22JGLYLT3:3:2201:47360:9524/1‑101 (MQ=60) ACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTA < LH00444:96:22JGLYLT3:3:1164:41350:15035/101‑1 (MQ=60) ACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTA < LH00444:96:22JGLYLT3:3:1236:38197:27709/101‑1 (MQ=60) CGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAA > LH00444:96:22JGLYLT3:3:2223:18642:15388/1‑101 (MQ=60) CGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGGCCAAGGTAAA < LH00444:96:22JGLYLT3:3:1263:13528:5855/101‑1 (MQ=60) GCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAAC < LH00444:96:22JGLYLT3:3:2104:33103:9940/101‑1 (MQ=60) CGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACT < LH00444:96:22JGLYLT3:3:1217:33140:22630/101‑1 (MQ=60) CGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACT < LH00444:96:22JGLYLT3:3:2120:13094:21028/101‑1 (MQ=60) CGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACT < LH00444:96:22JGLYLT3:3:2269:28701:15516/101‑1 (MQ=60) CGCCTGCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACT < LH00444:96:22JGLYLT3:3:2149:17347:29263/101‑1 (MQ=60) GCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATAT < LH00444:58:22357VLT4:2:1184:41801:24253/151‑1 (MQ=60) GCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTG < LH00444:96:22JGLYLT3:3:1228:49995:27292/101‑1 (MQ=60) CTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGAC > LH00444:96:22JGLYLT3:3:2261:34915:19265/1‑101 (MQ=60) CTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGAC < LH00444:96:22JGLYLT3:3:2260:43190:18224/101‑1 (MQ=60) CTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGAC > LH00444:96:22JGLYLT3:3:2103:23930:13369/1‑101 (MQ=60) CTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGAC < LH00444:96:22JGLYLT3:3:2163:45049:1929/101‑1 (MQ=60) GCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAG < LH00444:96:22JGLYLT3:3:1225:27388:27821/101‑1 (MQ=60) CCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGG < LH00444:96:22JGLYLT3:3:2209:28590:12119/101‑1 (MQ=60) CGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGG > LH00444:96:22JGLYLT3:3:2142:8998:3451/1‑101 (MQ=60) CGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGG < LH00444:96:22JGLYLT3:3:2112:40213:10213/101‑1 (MQ=60) CGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGG < LH00444:96:22JGLYLT3:3:2173:45650:17134/101‑1 (MQ=60) CGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGG < LH00444:96:22JGLYLT3:3:2205:18004:15724/101‑1 (MQ=60) CGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGG > LH00444:96:22JGLYLT3:3:2127:34896:27148/1‑101 (MQ=60) GAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGA < LH00444:96:22JGLYLT3:3:2171:3885:19586/101‑1 (MQ=60) GAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGA < LH00444:96:22JGLYLT3:3:1117:17671:8835/101‑1 (MQ=60) AGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGATCGCC > LH00444:90:22JGJLLT3:8:2271:25752:18320/1‑151 (MQ=60) AGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGAT < LH00444:96:22JGLYLT3:3:2155:36431:4589/101‑1 (MQ=60) AGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGAT < LH00444:96:22JGLYLT3:3:2234:11605:26459/101‑1 (MQ=60) AGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGAT < LH00444:96:22JGLYLT3:3:2177:29783:14347/101‑1 (MQ=60) AGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGAT > LH00444:96:22JGLYLT3:3:2185:34943:10117/1‑101 (MQ=60) AGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGGAAACTGACCGAGGGAG < LH00444:96:22JGLYLT3:3:2151:1499:28847/101‑1 (MQ=60) GGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATT < LH00444:96:22JGLYLT3:3:1138:25058:5871/101‑1 (MQ=60) GGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATT < LH00444:96:22JGLYLT3:3:1150:25817:14683/101‑1 (MQ=60) GAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTT < LH00444:96:22JGLYLT3:3:1167:48386:2907/101‑1 (MQ=60) GAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTT < LH00444:96:22JGLYLT3:3:1111:23135:12856/101‑1 (MQ=60) GAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTT < LH00444:96:22JGLYLT3:3:1156:10329:6976/101‑1 (MQ=60) GAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTT < LH00444:96:22JGLYLT3:3:1227:15248:20691/101‑1 (MQ=60) GAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTT < LH00444:96:22JGLYLT3:3:1134:36228:26668/101‑1 (MQ=60) AGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTT < LH00444:96:22JGLYLT3:3:1158:32640:20002/101‑1 (MQ=60) CGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAA < LH00444:96:22JGLYLT3:3:2189:6760:23800/101‑1 (MQ=60) GGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAAT < LH00444:96:22JGLYLT3:3:1240:10949:15164/101‑1 (MQ=60) GGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAAT > LH00444:96:22JGLYLT3:3:1205:2304:23031/1‑101 (MQ=60) GGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAAT > LH00444:96:22JGLYLT3:3:2157:18854:11430/1‑101 (MQ=60) GGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAAT < LH00444:96:22JGLYLT3:3:1118:3607:8082/101‑1 (MQ=60) GGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAAT > LH00444:96:22JGLYLT3:3:1231:31466:8482/1‑101 (MQ=60) GGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAAT < LH00444:96:22JGLYLT3:3:2179:26492:19826/101‑1 (MQ=60) GCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGGGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACATAGGGATTTTAATT > LH00444:96:22JGLYLT3:3:1228:12733:27805/1‑101 (MQ=60) GCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATT < LH00444:96:22JGLYLT3:3:2244:4467:18865/101‑1 (MQ=60) CTGAAGGAGCTGGAGGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAATGTAAACTGACCTAGGGATTTTAATTC > LH00444:96:22JGLYLT3:3:1215:6206:21717/1‑101 (MQ=60) CTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGTGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTC < LH00444:96:22JGLYLT3:3:2256:44669:26427/101‑1 (MQ=60) CTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTATGGATTTTAATTC < LH00444:96:22JGLYLT3:3:2252:5854:14122/101‑1 (MQ=60) CTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTC < LH00444:96:22JGLYLT3:3:1107:4717:19361/101‑1 (MQ=60) TGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAGTTCA > LH00444:96:22JGLYLT3:3:2149:9488:13177/1‑101 (MQ=60) GAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCAT > LH00444:96:22JGLYLT3:3:1257:1869:3019/1‑101 (MQ=60) GAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCAT < LH00444:96:22JGLYLT3:3:1140:4255:23047/101‑1 (MQ=60) GAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCAT < LH00444:96:22JGLYLT3:3:1235:42358:15468/101‑1 (MQ=60) AAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATT > LH00444:96:22JGLYLT3:3:1129:36274:13545/1‑101 (MQ=60) AGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCACGGTAAACTGACCTAGGGATTTTAATTCATTA > LH00444:96:22JGLYLT3:3:2237:23135:5903/1‑101 (MQ=60) AGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTA < LH00444:96:22JGLYLT3:3:2265:38012:29439/101‑1 (MQ=60) AGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTA < LH00444:96:22JGLYLT3:3:1153:52085:22294/101‑1 (MQ=60) AGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTA < LH00444:96:22JGLYLT3:3:1155:2553:19906/101‑1 (MQ=60) GGAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAG < LH00444:96:22JGLYLT3:3:2239:24910:8466/101‑1 (MQ=60) GAGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGC > LH00444:96:22JGLYLT3:3:2228:46731:26668/1‑101 (MQ=60) tctTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCA < LH00444:96:22JGLYLT3:3:1203:30763:2875/98‑1 (MQ=60) AGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCA < LH00444:96:22JGLYLT3:3:1245:23172:14619/101‑1 (MQ=60) AGCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCA > LH00444:96:22JGLYLT3:3:1234:37282:21380/1‑101 (MQ=60) GCTGGAAGGCCTGCTGGTCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAG < LH00444:96:22JGLYLT3:3:2181:52002:4877/101‑1 (MQ=60) GCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAG < LH00444:96:22JGLYLT3:3:2158:39288:4765/101‑1 (MQ=60) GCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAG < LH00444:96:22JGLYLT3:3:2122:2147:17952/101‑1 (MQ=60) GCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAG < LH00444:96:22JGLYLT3:3:2271:15757:26059/101‑1 (MQ=60) GCTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGGCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAG < LH00444:96:22JGLYLT3:3:2264:22090:11430/101‑1 (MQ=60) CTGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGG < LH00444:96:22JGLYLT3:3:2241:13713:16974/101‑1 (MQ=60) TGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCagatcggaagagcacacgtctgaactccagtcaccgccttccatctaggggggcgtg > LH00444:96:22JGLYLT3:3:2235:17893:6752/1‑44 (MQ=60) TGGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGTATTTTAATTCATTAGCAGGA < LH00444:96:22JGLYLT3:3:1270:7962:22037/101‑1 (MQ=60) GGAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAG > LH00444:96:22JGLYLT3:3:1114:27518:27437/1‑101 (MQ=60) GAAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGT < LH00444:96:22JGLYLT3:3:1218:29755:14363/101‑1 (MQ=60) AAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTC < LH00444:96:22JGLYLT3:3:2220:41341:21172/101‑1 (MQ=60) AAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTC > LH00444:96:22JGLYLT3:3:1243:27573:29680/1‑101 (MQ=60) AAGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTC < LH00444:96:22JGLYLT3:3:1220:45936:19778/101‑1 (MQ=60) AGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCT < LH00444:96:22JGLYLT3:3:2214:25262:17887/101‑1 (MQ=60) AGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCT < LH00444:96:22JGLYLT3:3:2107:38983:5935/101‑1 (MQ=60) AGGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCT > LH00444:96:22JGLYLT3:3:1204:2572:26315/1‑101 (MQ=60) GGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTT > LH00444:96:22JGLYLT3:3:2258:10718:14987/1‑101 (MQ=60) GGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTT < LH00444:96:22JGLYLT3:3:1213:8896:17343/101‑1 (MQ=60) GGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTT < LH00444:96:22JGLYLT3:3:1220:14629:28398/101‑1 (MQ=60) GGCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTT < LH00444:96:22JGLYLT3:3:2119:19289:20996/101‑1 (MQ=60) GCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTT < LH00444:96:22JGLYLT3:3:2268:23958:26395/101‑1 (MQ=60) GCCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTT > LH00444:96:22JGLYLT3:3:2138:46223:10629/1‑101 (MQ=60) CCTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTG < LH00444:96:22JGLYLT3:3:2218:35007:22502/101‑1 (MQ=60) CTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGT < LH00444:96:22JGLYLT3:3:1238:16663:9171/101‑1 (MQ=60) CTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGT < LH00444:96:22JGLYLT3:3:1115:28026:2298/101‑1 (MQ=60) CTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGT > LH00444:96:22JGLYLT3:3:1223:9118:5614/1‑101 (MQ=60) CTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGT < LH00444:96:22JGLYLT3:3:2121:12761:3852/101‑1 (MQ=60) CTGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGT > LH00444:96:22JGLYLT3:3:1251:32585:16606/1‑101 (MQ=60) CTGCTGGCCGAGGCGGGAGCGATCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGAACTAGGGATTTTAATTCATTAGCAGGAGTCTTTGT > LH00444:96:22JGLYLT3:3:2280:25086:16558/1‑101 (MQ=60) TGCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTA < LH00444:96:22JGLYLT3:3:2165:25604:16878/101‑1 (MQ=60) GCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTTATTAGCAGGAGTCTTTGTAT < LH00444:96:22JGLYLT3:3:1106:34573:19345/101‑1 (MQ=60) GCTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTAT < LH00444:96:22JGLYLT3:3:2253:8573:9956/101‑1 (MQ=60) GCTGGCCGAGGCGGGAGCGCTCAACGAGCCGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTAT < LH00444:96:22JGLYLT3:3:2250:41063:29215/101‑1 (MQ=60) CTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATG < LH00444:96:22JGLYLT3:3:2231:7768:20547/101‑1 (MQ=60) CTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATG > LH00444:96:22JGLYLT3:3:2147:23773:9796/1‑101 (MQ=60) CTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATG < LH00444:96:22JGLYLT3:3:1105:26538:17054/101‑1 (MQ=60) CTGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATG < LH00444:96:22JGLYLT3:3:2271:23838:24457/101‑1 (MQ=60) TGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGC > LH00444:96:22JGLYLT3:3:1153:1139:21076/1‑101 (MQ=60) TGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGC < LH00444:96:22JGLYLT3:3:1260:10690:4333/101‑1 (MQ=60) TGGCCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTGGGTATGC < LH00444:96:22JGLYLT3:3:2175:47980:26395/101‑1 (MQ=60) CCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCT < LH00444:96:22JGLYLT3:3:1252:32215:21220/101‑1 (MQ=60) CCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCT < LH00444:96:22JGLYLT3:3:2202:37855:1673/101‑1 (MQ=60) CCGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCT < LH00444:96:22JGLYLT3:3:2181:14860:20082/101‑1 (MQ=60) CGAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTC > LH00444:96:22JGLYLT3:3:2133:5198:21028/1‑101 (MQ=60) GAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCA > LH00444:96:22JGLYLT3:3:1141:25724:23784/1‑101 (MQ=60) GAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCA > LH00444:96:22JGLYLT3:3:1268:22442:16942/1‑101 (MQ=60) GAGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCA < LH00444:96:22JGLYLT3:3:2136:10200:10309/101‑1 (MQ=60) AGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAG < LH00444:96:22JGLYLT3:3:1230:30282:26908/101‑1 (MQ=60) AGGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAG < LH00444:96:22JGLYLT3:3:1222:49625:15180/101‑1 (MQ=60) GGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGA < LH00444:96:22JGLYLT3:3:1171:24975:15212/101‑1 (MQ=60) GGCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGA > LH00444:96:22JGLYLT3:3:2286:33519:10053/1‑101 (MQ=60) GCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGAT < LH00444:96:22JGLYLT3:3:1152:33047:20451/101‑1 (MQ=60) GCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGAT < LH00444:96:22JGLYLT3:3:1136:25946:17695/101‑1 (MQ=60) GCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGAT < LH00444:96:22JGLYLT3:3:2141:45113:16173/101‑1 (MQ=60) GCGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGAT < LH00444:96:22JGLYLT3:3:2211:42765:15789/101‑1 (MQ=60) CGGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATA < LH00444:96:22JGLYLT3:3:1149:23561:4108/101‑1 (MQ=60) GGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTTTTTGTATGCCCTCAGATAT < LH00444:96:22JGLYLT3:3:2276:7666:23223/101‑1 (MQ=60) GGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATAT > LH00444:96:22JGLYLT3:3:1283:43375:2843/1‑101 (MQ=60) GGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATAT > LH00444:96:22JGLYLT3:3:1201:5688:28222/1‑101 (MQ=60) GGGAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATAT > LH00444:96:22JGLYLT3:3:2105:21804:5807/1‑101 (MQ=60) GAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCG < LH00444:96:22JGLYLT3:3:1145:30338:5791/101‑1 (MQ=60) GAGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCG < LH00444:96:22JGLYLT3:3:1124:10237:26620/101‑1 (MQ=60) AGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGA > LH00444:96:22JGLYLT3:3:1254:51539:25418/1‑101 (MQ=60) AGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGACTTTAATTCATTAGCAagatcggaagagcacacgtctgaactcc > LH00444:96:22JGLYLT3:3:2242:3108:1288/1‑73 (MQ=60) | ATCTCGGATGCCGGCGTCGCCGTGCTCTCGGCCTATGCCGGTCTGCGCTCGGCGGCCCTCAACGTCTACGTCAACGCCAAGGGCCTCGACGACCGCGCCTTCGCCGAGGAGCGGCTGAAGGAGCTGGAAGGCCTGCTGGCCGAGGCGGGCGCGCTCAACGAGCGGATCTACGAGACGGTGAAGTCCAAGGTAAACTGACCTAGGGATTTTAATTCATTAGCAGGAGTCTTTGTATGCCCTCAGATATCGAGATCGCCCGCGCGGCGACCCTGAAGCCGAT > AE015451_phaM1/5701060‑5701339 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |