Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F73 I2 R1
|
76 |
833.2 |
37290668 |
99.4% |
37066923 |
136.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
AE015451_phaM1 |
5,681,415 |
+CGGG |
intergenic (‑133/+71) |
PP_4986 CDS (Channel protein_ hemolysin III family) ← / ← PP_4987 CDS (putative Chemotaxis protein) |
–/– |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | AE015451_phaM1 | 5,681,415 | 1 | . | C | 98.9%
| 353.1
/ ‑4.3
| 93 | intergenic (‑133/+71) | PP_4986 CDS (Channel protein_ hemolysin III family)/PP_4987 CDS (putative Chemotaxis protein) | –/– |
| Reads supporting (aligned to +/- strand): ref base . (0/0); major base C (74/18); minor base G (1/0); total (75/18) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
| * | AE015451_phaM1 | 5,681,415 | 2 | . | G | 98.9%
| 353.7
/ ‑2.9
| 93 | intergenic (‑133/+71) | PP_4986 CDS (Channel protein_ hemolysin III family)/PP_4987 CDS (putative Chemotaxis protein) | –/– |
| Reads supporting (aligned to +/- strand): ref base . (1/0); new base G (74/18); total (75/18) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | AE015451_phaM1 | 5,681,415 | 3 | . | G | 98.9%
| 348.2
/ ‑2.9
| 93 | intergenic (‑133/+71) | PP_4986 CDS (Channel protein_ hemolysin III family)/PP_4987 CDS (putative Chemotaxis protein) | –/– |
| Reads supporting (aligned to +/- strand): ref base . (1/0); new base G (74/18); total (75/18) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
| * | AE015451_phaM1 | 5,681,415 | 4 | . | G | 98.9%
| 354.1
/ ‑2.9
| 93 | intergenic (‑133/+71) | PP_4986 CDS (Channel protein_ hemolysin III family)/PP_4987 CDS (putative Chemotaxis protein) | –/– |
| Reads supporting (aligned to +/- strand): ref base . (1/0); new base G (74/18); total (75/18) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 111 total aligned reads displayed.
ACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGC‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTT > AE015451_phaM1/5681279‑5681529
||||
aCATGCAAACACATACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGTGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACcgc < 2:1812551/137‑1 (MQ=255)
aCATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACcgc < 1:13490590/137‑1 (MQ=255)
aCATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACcgc < 1:245636/137‑1 (MQ=255)
aCATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACcgc < 2:6212126/137‑1 (MQ=255)
aCATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACcgc < 1:9444823/137‑1 (MQ=255)
aTGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACcgccg < 1:9861148/137‑3 (MQ=255)
gCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACcgccggg < 2:521324/137‑5 (MQ=255)
cAAACACATACCTCCTGAGTTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACcgccgggg < 2:6315287/137‑6 (MQ=255)
cAAACACATACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACcgccgggg < 2:10289412/137‑6 (MQ=255)
cAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTTTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCGTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACcgccgggg < 2:6623300/137‑6 (MQ=255)
cAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACcgccgggg < 2:6705204/137‑6 (MQ=255)
cAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACcgccgggg < 1:12936926/137‑6 (MQ=255)
cAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACcgccgggg < 1:12936927/137‑6 (MQ=255)
cAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACcgccgggg < 2:14855230/137‑6 (MQ=255)
cAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACcgccgggg < 2:6315332/137‑6 (MQ=255)
cAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACcgccgggg < 1:15208321/137‑6 (MQ=255)
aaCACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACcgccgggg > 1:8087422/1‑130 (MQ=255)
aaCACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACcgccgggg < 2:8087422/135‑6 (MQ=255)
tGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCt < 1:3015250/137‑1 (MQ=37)
gAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTa < 1:6128310/137‑1 (MQ=37)
gAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTa < 2:10651571/137‑1 (MQ=37)
gAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTa < 1:3019790/137‑1 (MQ=37)
gAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTa < 2:10217448/137‑1 (MQ=37)
gAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTa < 1:8302788/137‑1 (MQ=37)
gAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTa < 2:11337162/137‑1 (MQ=37)
gAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTa < 2:4689462/137‑1 (MQ=37)
gAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTa < 1:16198568/137‑1 (MQ=37)
gAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTa < 1:13843194/137‑1 (MQ=37)
gAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTa < 2:6600388/137‑1 (MQ=37)
gAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTa < 1:13026406/137‑1 (MQ=37)
gAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTa < 2:7869929/137‑1 (MQ=37)
gAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTa < 2:7869930/137‑1 (MQ=37)
gAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTa < 1:1017556/137‑1 (MQ=37)
gAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTa < 2:984910/137‑1 (MQ=37)
gAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTa < 2:984911/137‑1 (MQ=37)
ggTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTTGCGAAAAAGGAACGAAGCGGCCCCCAACCTTCCCTTCCACCGCACGAACCACCGCG‑‑‑GCTGCTGCGCAACCCCACCGCAACACaa > 2:7343777/1‑137 (MQ=255)
gAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCa > 2:8659386/1‑137 (MQ=38)
aaaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACCCAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAg > 1:3982213/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGTTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 1:5214632/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGTCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 2:7243030/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACGCAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 2:2026372/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCCgg > 2:12856123/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 2:5323300/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 1:1605792/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 2:1176498/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 1:12737039/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 2:9583946/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 2:3200513/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 2:13216774/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 1:17312991/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 2:16173140/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 1:11450999/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 2:17814916/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 2:17814954/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 2:17918025/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 2:2686540/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 1:8864026/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 1:4546973/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 1:6407537/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 1:6407574/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 1:6693475/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 1:10677463/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 1:3611381/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 1:18476760/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 1:9141785/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 1:14628725/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 1:3258255/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 1:2883638/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 1:15915613/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGACCCTGCGCCTCACATCCTAACCAAGGTCAgg > 1:7674085/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCACGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 2:4795272/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCACTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 1:7674060/1‑137 (MQ=38)
ggggCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCCTGA‑‑‑ACCGCCGGGGCCACTGCTCAGCCCCATCGCGACCCAATGCCGCTCCCACTCCAGCCCACCCGGTCCCTCACCTCACATTCTAAACCAGGTCCGGtt > 1:330316/1‑137 (MQ=255)
gcgcGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCa > 1:6064533/1‑137 (MQ=38)
gAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATc > 2:11883946/1‑137 (MQ=38)
gAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATc > 2:10623531/1‑137 (MQ=38)
gAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATc > 1:325854/1‑137 (MQ=38)
aGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCCCTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCcg > 1:16743814/1‑137 (MQ=38)
cccAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCAc > 2:10301610/1‑137 (MQ=38)
ccAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACg > 2:11586067/1‑137 (MQ=38)
ccAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACg > 2:11586029/1‑137 (MQ=38)
ccAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACg > 1:1746331/1‑137 (MQ=38)
ttGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGTTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCttt > 1:3453071/1‑137 (MQ=38)
ttGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCttt > 1:12468483/1‑137 (MQ=38)
ttGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCttt > 2:888961/1‑137 (MQ=38)
ttGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCttt > 1:10432337/1‑137 (MQ=38)
ttGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCttt > 2:782292/1‑137 (MQ=38)
ttGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCttt > 1:12802936/1‑137 (MQ=38)
ttGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCttt > 1:13677459/1‑137 (MQ=38)
ttGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCttt > 1:13834968/1‑137 (MQ=38)
ttGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCttt > 1:16624889/1‑137 (MQ=38)
ttGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCttt > 1:16624890/1‑137 (MQ=38)
ttGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCttt > 2:3396854/1‑137 (MQ=38)
ttGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCttt > 2:2307383/1‑137 (MQ=38)
ttGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCttt > 2:17050754/1‑137 (MQ=38)
ttGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCttt > 2:11957412/1‑137 (MQ=38)
ttGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCttt > 1:4746004/1‑137 (MQ=38)
ttGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCGCGAAACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCttt > 2:11935775/1‑137 (MQ=38)
ttGCCACTGCATGA‑‑‑ACCGCCGGGGCTGCTGCACAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTAACATCCTACCCAAGGTCAGGTTGCAGATCCGCGTCAAGCACCAGCCttt > 1:8078429/1‑137 (MQ=37)
ttGCCAATGCATGA‑‑‑ACCGCCGGGGCTGCTGCGCAGCCCTATCACGACACAAGGCCGCTCACACTCCCGACCACCAGGCCCTGCGCCTCACATCCTAACAAAGGTCAGGTTACAGATCCGCCTCACGCACCAGCCttt > 2:13191059/1‑137 (MQ=25)
||||
ACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGA‑‑‑ACCGC‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTT > AE015451_phaM1/5681279‑5681529
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGC‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGC > AE015451_phaM1/5681270‑5681564
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CACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcgggg < LH00941:114:22FVMWLT1:2:2269:38220:5740/151‑6 (MQ=60)
CACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcgggg < LH00941:114:22FVMWLT1:2:1269:34430:6124/151‑6 (MQ=60)
CACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcgggg < LH00941:114:22FVMWLT1:2:1269:34448:6124/151‑6 (MQ=60)
CACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcgggg < LH00941:114:22FVMWLT1:2:2112:32627:22729/151‑6 (MQ=60)
ACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggc < LH00941:114:22FVMWLT1:2:1140:13527:16388/151‑7 (MQ=60)
ACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggc < LH00941:114:22FVMWLT1:2:1224:8951:18198/151‑7 (MQ=60)
CCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggct > LH00941:114:22FVMWLT1:2:1252:9265:5291/1‑144 (MQ=60)
CCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggct < LH00941:114:22FVMWLT1:2:2109:50794:16693/151‑8 (MQ=60)
AATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTG < LH00941:114:22FVMWLT1:2:1145:41660:5067/151‑1 (MQ=60)
AATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTG < LH00941:114:22FVMWLT1:2:2215:1952:2521/151‑1 (MQ=60)
ACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGC < LH00941:114:22FVMWLT1:2:2163:11724:25916/151‑1 (MQ=60)
ACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGC < LH00941:114:22FVMWLT1:2:2102:44858:9711/151‑1 (MQ=60)
ACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGC < LH00941:114:22FVMWLT1:2:1104:46051:23434/151‑1 (MQ=60)
ATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAG < LH00941:114:22FVMWLT1:2:2108:29789:21753/151‑1 (MQ=60)
CAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCC < LH00941:114:22FVMWLT1:2:2155:48686:16212/151‑1 (MQ=60)
CAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCC < LH00941:114:22FVMWLT1:2:2155:48667:16212/151‑1 (MQ=60)
CAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCC < LH00941:114:22FVMWLT1:2:2155:48649:16212/151‑1 (MQ=60)
CAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCC < LH00941:114:22FVMWLT1:2:2219:30898:23002/151‑1 (MQ=60)
gctcggagatgtgtataagagacaGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATC < LH00941:114:22FVMWLT1:2:2135:20988:15700/127‑1 (MQ=60)
ACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG < LH00941:114:22FVMWLT1:2:1212:22402:23434/151‑1 (MQ=60)
ACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG < LH00941:114:22FVMWLT1:2:1230:2969:8350/151‑1 (MQ=60)
ACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG < LH00941:114:22FVMWLT1:2:1239:5253:29183/151‑1 (MQ=60)
ACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG < LH00941:114:22FVMWLT1:2:1206:6658:9295/151‑1 (MQ=60)
ACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG < LH00941:114:22FVMWLT1:2:1263:36325:4539/151‑1 (MQ=60)
ACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG < LH00941:114:22FVMWLT1:2:1101:48233:26380/151‑1 (MQ=60)
ACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG < LH00941:114:22FVMWLT1:2:2109:41308:7181/151‑1 (MQ=60)
ACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG < LH00941:114:22FVMWLT1:2:2114:21367:16548/151‑1 (MQ=60)
ACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG < LH00941:114:22FVMWLT1:2:2161:17243:22761/151‑1 (MQ=60)
ACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG < LH00941:114:22FVMWLT1:2:2214:14673:17477/151‑1 (MQ=60)
ACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG < LH00941:114:22FVMWLT1:2:1155:1564:26572/151‑1 (MQ=60)
ACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG < LH00941:114:22FVMWLT1:2:1101:48223:26364/151‑1 (MQ=60)
ACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG < LH00941:114:22FVMWLT1:2:1148:10291:23018/151‑1 (MQ=60)
ACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG < LH00941:114:22FVMWLT1:2:1148:13749:27469/151‑1 (MQ=60)
ACAGACCTCCTGAGGTGGGCTGGGTTCCTGTGGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG < LH00941:114:22FVMWLT1:2:1263:36316:4523/151‑1 (MQ=60)
CTCCTGAGGTGGGCTGGGTTCCTGTTTTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACAC < LH00941:114:22FVMWLT1:2:2167:35225:23834/151‑1 (MQ=60)
CTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACAC < LH00941:114:22FVMWLT1:2:1253:51515:11761/151‑1 (MQ=60)
CTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACAC < LH00941:114:22FVMWLT1:2:2224:45219:28942/151‑1 (MQ=60)
CTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACAC < LH00941:114:22FVMWLT1:2:2167:48297:16629/151‑1 (MQ=60)
TGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGG < LH00941:114:22FVMWLT1:2:1146:45931:14098/151‑1 (MQ=60)
GAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGC < LH00941:114:22FVMWLT1:2:1255:37102:11296/151‑1 (MQ=60)
GAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGC < LH00941:114:22FVMWLT1:2:2156:11225:26300/151‑1 (MQ=60)
GAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGC < LH00941:114:22FVMWLT1:2:1223:44424:3514/151‑1 (MQ=60)
GAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGC < LH00941:114:22FVMWLT1:2:1116:33792:15844/151‑1 (MQ=60)
GAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGC < LH00941:114:22FVMWLT1:2:1146:33293:15972/151‑1 (MQ=60)
GAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGC < LH00941:114:22FVMWLT1:2:2234:2026:20007/151‑1 (MQ=60)
GAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGC < LH00941:114:22FVMWLT1:2:1146:33302:15988/151‑1 (MQ=60)
GAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGC < LH00941:114:22FVMWLT1:2:2169:51043:4379/151‑1 (MQ=60)
AGGTGGGCTGGGTTCCTGTTTTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCC < LH00941:114:22FVMWLT1:2:2164:34282:13554/151‑1 (MQ=60)
cccttttcaaaaaaaaaaacgccacaccagatatgtgcgagcgtctcgtgggctcggagatgtgtataagagacagTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACC < LH00941:114:22FVMWLT1:2:1155:19490:4459/75‑1 (MQ=60)
GGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACCCAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTCACCAAGGTCAG > LH00941:114:22FVMWLT1:2:1160:4559:27373/1‑151 (MQ=60)
GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGTTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGG > LH00941:114:22FVMWLT1:2:1209:10716:11424/1‑151 (MQ=60)
GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGG > LH00941:114:22FVMWLT1:2:2152:31786:15828/1‑151 (MQ=60)
GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGG > LH00941:114:22FVMWLT1:2:2211:44239:2233/1‑151 (MQ=60)
GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGG > LH00941:114:22FVMWLT1:2:1144:50054:15123/1‑151 (MQ=60)
GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGG > LH00941:114:22FVMWLT1:2:2121:28652:7805/1‑151 (MQ=60)
GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGG > LH00941:114:22FVMWLT1:2:1267:43730:22906/1‑151 (MQ=60)
GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGG > LH00941:114:22FVMWLT1:2:1263:43980:19879/1‑151 (MQ=60)
GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGG > LH00941:114:22FVMWLT1:2:1150:29687:3354/1‑151 (MQ=60)
GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGG > LH00941:114:22FVMWLT1:2:2133:51274:1512/1‑151 (MQ=60)
GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGG > LH00941:114:22FVMWLT1:2:1125:42954:12017/1‑151 (MQ=60)
GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGG > LH00941:114:22FVMWLT1:2:1169:19046:9903/1‑151 (MQ=60)
GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGG > LH00941:114:22FVMWLT1:2:2230:28300:12065/1‑151 (MQ=60)
GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGG > LH00941:114:22FVMWLT1:2:2268:2414:15363/1‑151 (MQ=60)
GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGG > LH00941:114:22FVMWLT1:2:2251:41502:8862/1‑151 (MQ=60)
GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGG > LH00941:114:22FVMWLT1:2:1231:35844:15588/1‑151 (MQ=60)
GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGG > LH00941:114:22FVMWLT1:2:1227:26146:8174/1‑151 (MQ=60)
GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGG > LH00941:114:22FVMWLT1:2:1227:26137:8190/1‑151 (MQ=60)
GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGG > LH00941:114:22FVMWLT1:2:1155:32895:11921/1‑151 (MQ=60)
GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGACCCTGCGCCTCACATCCTAACCAAGGTCAGG > LH00941:114:22FVMWLT1:2:1246:47354:1801/1‑151 (MQ=60)
GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCACTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGG > LH00941:114:22FVMWLT1:2:1246:47345:1785/1‑151 (MQ=60)
ATTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCCTGAACCGCCGGGGCCACTGCTCAGCCCCATCGCGACCCAATGCCGCTCCCACTCCAGCCCACCcggtccctcacctcacattctaaaccaggtccggtt > LH00941:114:22FVMWLT1:2:1106:27940:3146/1‑115 (MQ=47)
GTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCA > LH00941:114:22FVMWLT1:2:1222:40911:4891/1‑151 (MQ=60)
CGNGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATC > LH00941:114:22FVMWLT1:2:1106:46726:1192/1‑151 (MQ=60)
CGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCCCTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCG > LH00941:114:22FVMWLT1:2:2242:28680:23930/1‑151 (MQ=60)
GGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTTTCGCGACACAAGGCCGCTCCCAC > LH00941:114:22FVMWLT1:2:1206:22458:11456/1‑90 (MQ=60)
GGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGTGACACAAGGCCGCTCCCAC > LH00941:114:22FVMWLT1:2:1225:31166:3386/1‑90 (MQ=60)
GGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACG > LH00941:114:22FVMWLT1:2:1127:34485:15251/1‑151 (MQ=60)
GCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGTTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTT > LH00941:114:22FVMWLT1:2:1152:16384:29439/1‑151 (MQ=60)
GCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTT > LH00941:114:22FVMWLT1:2:2166:52042:18854/1‑151 (MQ=60)
GCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTT > LH00941:114:22FVMWLT1:2:2241:26904:1929/1‑151 (MQ=60)
GCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTT > LH00941:114:22FVMWLT1:2:2160:27903:21144/1‑151 (MQ=60)
GCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTT > LH00941:114:22FVMWLT1:2:2168:38072:29375/1‑151 (MQ=60)
GCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTT > LH00941:114:22FVMWLT1:2:2241:26886:1929/1‑151 (MQ=60)
GCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTT > LH00941:114:22FVMWLT1:2:1126:16217:3914/1‑151 (MQ=60)
GCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTT > LH00941:114:22FVMWLT1:2:2153:40698:15764/1‑151 (MQ=60)
GCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTT > LH00941:114:22FVMWLT1:2:1202:32868:9951/1‑151 (MQ=60)
GCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTT > LH00941:114:22FVMWLT1:2:2148:16116:13826/1‑151 (MQ=60)
GCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTT > LH00941:114:22FVMWLT1:2:1202:32877:9935/1‑151 (MQ=60)
GCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTT > LH00941:114:22FVMWLT1:2:1252:20673:1416/1‑151 (MQ=60)
GCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTT > LH00941:114:22FVMWLT1:2:2117:14683:15412/1‑151 (MQ=60)
GCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCACAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTAACATCCTACCCAAGGTCAGGTTGCAGATCCGCGTCAAGCACCAGCCTTT > LH00941:114:22FVMWLT1:2:1252:20655:1416/1‑151 (MQ=60)
AGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAAT > LH00941:114:22FVMWLT1:2:2153:12455:6909/1‑151 (MQ=60)
GGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATG > LH00941:114:22FVMWLT1:2:2251:27376:14979/1‑151 (MQ=60)
GGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATG > LH00941:114:22FVMWLT1:2:1110:49194:12417/1‑151 (MQ=60)
GGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATG > LH00941:114:22FVMWLT1:2:2251:27367:14963/1‑151 (MQ=60)
GGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATG > LH00941:114:22FVMWLT1:2:1132:41715:14195/1‑151 (MQ=60)
GGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATG > LH00941:114:22FVMWLT1:2:1112:38405:21560/1‑151 (MQ=60)
GGCTTTCATTGCCACTGCATGAACCGCCGGAGCTGCTGCGCAGCCCTATCGCGCCACAAGGCCGCCCCCACTCCCGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCCGGTTGCAAATCCACGTCACGCACCAGCCTTTCCAATG > LH00941:114:22FVMWLT1:2:2237:12362:18342/1‑151 (MQ=60)
CTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCG > LH00941:114:22FVMWLT1:2:2215:26350:14515/1‑151 (MQ=60)
TTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGAC > LH00941:114:22FVMWLT1:2:2162:22587:4891/1‑151 (MQ=60)
TTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGAC > LH00941:114:22FVMWLT1:2:1244:9755:2841/1‑151 (MQ=60)
TTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGAC > LH00941:114:22FVMWLT1:2:1244:9755:2873/1‑151 (MQ=60)
TTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGAC > LH00941:114:22FVMWLT1:2:2134:28689:15876/1‑151 (MQ=60)
TTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGAC > LH00941:114:22FVMWLT1:2:2117:9764:20247/1‑151 (MQ=60)
TTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGAC > LH00941:114:22FVMWLT1:2:1231:20350:10464/1‑151 (MQ=60)
TCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACC > LH00941:114:22FVMWLT1:2:2135:27764:11296/1‑151 (MQ=60)
CATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCA > LH00941:114:22FVMWLT1:2:1203:50664:5996/1‑151 (MQ=60)
CATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCA > LH00941:114:22FVMWLT1:2:1236:43601:23866/1‑151 (MQ=60)
TTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGG > LH00941:114:22FVMWLT1:2:1163:3247:22281/1‑151 (MQ=60)
CCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTCACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCC > LH00941:114:22FVMWLT1:2:2114:8313:24811/1‑151 (MQ=60)
CCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCC > LH00941:114:22FVMWLT1:2:2156:1324:6268/1‑151 (MQ=60)
GGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTA < LH00941:114:22FVMWLT1:2:2102:8923:13666/151‑1 (MQ=60)
GCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCCGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTAC > LH00941:114:22FVMWLT1:2:2251:26757:21657/1‑151 (MQ=60)
GCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTAC > LH00941:114:22FVMWLT1:2:1216:28337:24363/1‑151 (MQ=60)
GCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTAC > LH00941:114:22FVMWLT1:2:2134:48778:25596/1‑151 (MQ=60)
GCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTAC > LH00941:114:22FVMWLT1:2:1147:34809:15812/1‑151 (MQ=60)
GCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTAC > LH00941:114:22FVMWLT1:2:2111:42880:9423/1‑151 (MQ=60)
GCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTAC > LH00941:114:22FVMWLT1:2:1112:1277:11536/1‑151 (MQ=60)
GCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTAC > LH00941:114:22FVMWLT1:2:2134:7712:3850/1‑151 (MQ=60)
GCATGAACCGCCGGGGCTGCTGCGCAGCCCCATCGCGACACAAAGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTACCATCCTAACCAAGGTCAAGTTGCAGATCCGCGTCACGCACCAGCCCTTCCAATGCGACCAGGTCCGGTAC > LH00941:114:22FVMWLT1:2:2207:32590:3834/1‑151 (MQ=60)
AACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCG > LH00941:114:22FVMWLT1:2:1252:26230:1240/1‑151 (MQ=60)
AACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCG > LH00941:114:22FVMWLT1:2:2106:26775:26204/1‑151 (MQ=60)
GG‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGC > LH00941:114:22FVMWLT1:2:2223:39413:17637/1‑151 (MQ=60)
GG‑‑‑‑GCTGCTGAGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCCGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGC > LH00941:114:22FVMWLT1:2:2154:43425:19046/1‑151 (MQ=60)
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CACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGC‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGC > AE015451_phaM1/5681270‑5681564
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |