Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F11 I4 R1
|
74 |
758.2 |
33768536 |
99.3% |
33532156 |
136.1 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
AE015451_phaM1 |
5,681,415 |
+CGGG |
intergenic (‑133/+71) |
PP_4986 CDS (Channel protein_ hemolysin III family) ← / ← PP_4987 CDS (putative Chemotaxis protein) |
–/– |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | AE015451_phaM1 | 5,681,415 | 1 | . | C | 97.9%
| 356.7
/ 1.1
| 98 | intergenic (‑133/+71) | PP_4986 CDS (Channel protein_ hemolysin III family)/PP_4987 CDS (putative Chemotaxis protein) | –/– |
| Reads supporting (aligned to +/- strand): ref base . (2/0); new base C (70/24); total (73/25) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 |
| * | AE015451_phaM1 | 5,681,415 | 2 | . | G | 97.9%
| 356.9
/ 0.4
| 98 | intergenic (‑133/+71) | PP_4986 CDS (Channel protein_ hemolysin III family)/PP_4987 CDS (putative Chemotaxis protein) | –/– |
| Reads supporting (aligned to +/- strand): ref base . (2/0); new base G (70/25); total (73/25) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | AE015451_phaM1 | 5,681,415 | 3 | . | G | 98.0%
| 371.5
/ 0.4
| 98 | intergenic (‑133/+71) | PP_4986 CDS (Channel protein_ hemolysin III family)/PP_4987 CDS (putative Chemotaxis protein) | –/– |
| Reads supporting (aligned to +/- strand): ref base . (2/0); new base G (71/25); total (73/25) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | AE015451_phaM1 | 5,681,415 | 4 | . | G | 98.0%
| 367.0
/ 0.4
| 98 | intergenic (‑133/+71) | PP_4986 CDS (Channel protein_ hemolysin III family)/PP_4987 CDS (putative Chemotaxis protein) | –/– |
| Reads supporting (aligned to +/- strand): ref base . (2/0); new base G (71/25); total (73/25) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 122 total aligned reads displayed.
ACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GC‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTT > AE015451_phaM1/5681279‑5681529
||||
aCATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACc‑‑‑‑gc < 1:15257708/137‑1 (MQ=255)
aCATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACc‑‑‑‑gc < 1:11594770/137‑1 (MQ=255)
aCATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACc‑‑‑‑gc < 1:1768986/137‑1 (MQ=255)
aCATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACc‑‑‑‑gc < 1:5983412/137‑1 (MQ=255)
aCATGCAAACACAGACCTCCTGAGGTGGGCTGGGTGCCTGTTTTGATGCTGATGGCTTCGTTCTTTGTGGTAGCGGCCTTGTGTCGCGAAAGTGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACc‑‑‑‑gc < 2:12208586/137‑1 (MQ=255)
aTGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACc‑‑‑‑gccg > 2:4831475/1‑135 (MQ=255)
aTGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACc‑‑‑‑gccg > 2:15014535/1‑135 (MQ=255)
cAAACGCAGACCTCCTTAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGTGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACc‑‑‑‑gccgggg < 1:11998408/137‑6 (MQ=38)
cAAACACAGACCTCCTTAGGTGGGCTGGGTTCCTGTTTTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACc‑‑‑‑gccgggg < 2:11834377/137‑6 (MQ=255)
cAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCATGCTTTCATTGCCACTGCATGAACc‑‑‑‑gccgggg < 1:8101699/137‑6 (MQ=255)
cAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACc‑‑‑‑gccgggg < 1:8769964/137‑6 (MQ=255)
cAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACc‑‑‑‑gccgggg < 1:15091565/137‑6 (MQ=255)
cAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACc‑‑‑‑gccgggg < 1:8077905/137‑6 (MQ=255)
cAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACc‑‑‑‑gccgggg < 2:14981582/137‑6 (MQ=255)
cAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACc‑‑‑‑gccgggg < 1:4831475/137‑6 (MQ=255)
cAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACc‑‑‑‑gccgggg < 1:11998407/137‑6 (MQ=255)
cAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACc‑‑‑‑gccgggg < 2:11219626/137‑6 (MQ=255)
cAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACc‑‑‑‑gccgggg < 1:379443/137‑6 (MQ=255)
ctGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGccc < 2:6267486/137‑1 (MQ=37)
taGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTa < 2:5227424/136‑1 (MQ=37)
gAGTTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAATGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTa < 2:3778166/137‑1 (MQ=37)
gAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTa < 1:8034000/137‑1 (MQ=37)
gAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTa < 1:621638/137‑1 (MQ=37)
gAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTa < 1:10073620/137‑1 (MQ=37)
gAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTa < 2:1674111/137‑1 (MQ=37)
gAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTa < 1:9921314/137‑1 (MQ=37)
gAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTa < 2:10544390/137‑1 (MQ=37)
gAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTa < 1:4263801/137‑1 (MQ=37)
gAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTa < 2:12477095/137‑1 (MQ=37)
gAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTa < 2:4253505/137‑1 (MQ=37)
gAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTa < 2:8501218/137‑1 (MQ=37)
gAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTa < 1:13299336/137‑1 (MQ=37)
gAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTa < 2:5652837/137‑1 (MQ=37)
gAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTa < 1:16377854/137‑1 (MQ=37)
gAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTa < 1:14657894/137‑1 (MQ=37)
gAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCCTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTa < 2:12682420/137‑1 (MQ=37)
gAGGGGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTNCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTa < 1:16289006/137‑1 (MQ=37)
aGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTAt > 1:2306190/1‑137 (MQ=37)
cTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCTaca > 2:10490418/1‑137 (MQ=37)
gATGGCTTCGTTCTTTGTGGGAGCGTCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGa > 1:16087255/1‑137 (MQ=25)
cggaattGTGTCTAGAAAGGGGCGCGAAGCGGCACCAAGCTTTCATTGCCACTGCCGGAAAC‑‑‑‑GCCAGGGATGCTGCGAAGACCTCTCATGACAAAAGGCCACCCCCACTCCAGAACACCCAGACCTACGCCCcacac > 2:14118166/6‑136 (MQ=255)
tCGCGAAAGGGGCGCGAAGCGGACCCAGGCTTTCATTGCCAATGCATGAACCACCGGG‑‑‑‑GTTGCTGCACAGCCCCACCGCGACAAAAGGACGCTCCCACTCCAGAACCCCAAGCCCTGCGCCCCACATCCTAAACAAg > 2:12145880/1‑137 (MQ=255)
gAAAGGGGCGCGAAGTGGCCCCAGGCTTTCATTGCCACTGCGTGAACC‑‑‑‑GCTGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCa < 1:947837/137‑1 (MQ=38)
aaGGGGCGCGGAGCGGCCCCAGGCTTTCATTGCCACTGCATGACCC‑‑‑‑GCCGGGGCTGCTGCGAAGCCCTATCTCGACACAAGGTCGATCCAACTCCAGACCACCAGGCCCTGCGCCTCACCCCCTAACCAAGGTCAgg > 2:8399527/1‑137 (MQ=255)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACc‑‑‑‑gc < 1:11364271/48‑1 (MQ=255)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACc‑‑‑‑gc > 2:11364271/1‑48 (MQ=255)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGTTGCGCAGCCCTATCGCGACATAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 2:806606/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 2:8484896/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 2:2045007/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 2:8546338/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 2:15202188/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 2:13230526/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 2:1343742/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 2:1343772/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 2:16351871/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 2:4960131/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 2:13794815/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 2:6660494/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 2:14195869/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 2:4755846/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 1:11758237/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 2:11312075/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 1:11913436/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 1:9823604/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 1:9276284/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 1:12102297/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 1:8481380/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 1:14392284/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 1:5711473/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 1:13375830/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg > 1:13687228/1‑137 (MQ=38)
aaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCAGGGGCTGCTGCGCATCCCTATCGCGACACAAGGCCGCTCCCGCTCCAAACCACCAGGCCCTGCGCCTCCCATCCTAACCAAGGTCAgg > 2:7144314/1‑137 (MQ=255)
ggggCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGtt > 1:16736644/1‑137 (MQ=38)
gcgcGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCATGCCCTGCGCCTCACATCCTAACCAAGATCAGGTTGCa > 2:5224920/1‑137 (MQ=38)
gcgcGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGTGCCTAACATCCTAACCAAGGTCAGGTTGCa > 2:5224955/1‑137 (MQ=38)
gcgcGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGATCAGGTTGCa > 2:4804004/1‑137 (MQ=38)
gagcgAAGGGGCCCCAGGCTGTCGTTGCAAATGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCAATATCGCGACACAAGACCGCTCCCACTCCAGACCACCAGGCCCTGCGCATCACATCCTAACCAAGGCCAGATTGCa > 2:2878184/3‑137 (MQ=255)
gcgAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGa > 2:14516706/1‑137 (MQ=38)
gAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATc > 1:13212524/1‑137 (MQ=38)
gAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATc > 1:13212495/1‑137 (MQ=38)
gAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATc > 2:11815334/1‑137 (MQ=38)
aGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCcg > 2:15260894/1‑137 (MQ=38)
cGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCcgcg > 2:12522762/1‑137 (MQ=38)
ccAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACg > 2:11296005/1‑137 (MQ=38)
ccAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACg > 2:6527089/1‑137 (MQ=38)
tttCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAg > 1:1463502/1‑137 (MQ=38)
tttCATTGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAg > 1:8760439/1‑137 (MQ=38)
ttGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCttt > 1:10849907/1‑137 (MQ=38)
ttGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCttt > 1:13034994/1‑137 (MQ=38)
ttGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCttt > 2:7892136/1‑137 (MQ=38)
ttGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCttt > 2:7264514/1‑137 (MQ=38)
ttGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCttt > 1:8212937/1‑137 (MQ=38)
ttGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCttt > 1:6677346/1‑137 (MQ=38)
ttGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCttt > 1:5695810/1‑137 (MQ=38)
ttGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCttt > 2:5514710/1‑137 (MQ=38)
ttGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCttt > 1:3996619/1‑137 (MQ=38)
ttGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCttt > 1:3558060/1‑137 (MQ=38)
ttGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCttt > 2:391066/1‑137 (MQ=38)
ttGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCttt > 2:5123477/1‑137 (MQ=38)
ttGCCACTGCATGAACC‑‑‑‑GCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCttt > 1:3558033/1‑137 (MQ=38)
||||
ACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GC‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTT > AE015451_phaM1/5681279‑5681529
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGC‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGC > AE015451_phaM1/5681270‑5681564
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CACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcgggg < LH00941:114:22FVMWLT1:2:1259:1841:26797/151‑6 (MQ=60)
CACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcgggg < LH00941:114:22FVMWLT1:2:1259:46273:16965/151‑6 (MQ=60)
CAACGTAATACATGCAAACACAGACCTCCTGAGTTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTTGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcgggg < LH00941:114:22FVMWLT1:2:1259:1823:26797/151‑6 (MQ=60)
ACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggc < LH00941:114:22FVMWLT1:2:1116:2572:10928/151‑7 (MQ=60)
ACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggc < LH00941:114:22FVMWLT1:2:1247:6815:8766/151‑7 (MQ=60)
ACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggc < LH00941:114:22FVMWLT1:2:1247:6824:8750/151‑7 (MQ=60)
ACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTGGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggc < LH00941:114:22FVMWLT1:2:1247:6815:8734/151‑7 (MQ=60)
AATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTG < LH00941:114:22FVMWLT1:2:1105:11364:1689/151‑1 (MQ=60)
AATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTG < LH00941:114:22FVMWLT1:2:2213:38100:2201/151‑1 (MQ=60)
ctttttcaaagcaaaaaacacccccctagatgctactatctgtctcgtgggctcggagatgtgtataagagacaGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGC < LH00941:114:22FVMWLT1:2:2150:12427:3658/77‑1 (MQ=60)
ACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGC < LH00941:114:22FVMWLT1:2:1130:35419:16612/151‑1 (MQ=60)
ACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGC < LH00941:114:22FVMWLT1:2:1230:30584:18582/151‑1 (MQ=60)
ACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGC < LH00941:114:22FVMWLT1:2:2153:7647:28174/151‑1 (MQ=60)
ACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGC < LH00941:114:22FVMWLT1:2:2244:38738:10255/151‑1 (MQ=60)
CAAACGCAGACCTCCTTAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGTGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCC < LH00941:114:22FVMWLT1:2:2160:9505:20568/151‑1 (MQ=60)
CAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCATGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCC < LH00941:114:22FVMWLT1:2:1265:14978:18806/151‑1 (MQ=60)
CAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCC < LH00941:114:22FVMWLT1:2:1265:18649:7581/151‑1 (MQ=60)
CAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCC < LH00941:114:22FVMWLT1:2:1107:11354:11376/151‑1 (MQ=60)
CAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCC < LH00941:114:22FVMWLT1:2:2106:2322:22025/151‑1 (MQ=60)
CAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCC < LH00941:114:22FVMWLT1:2:1250:35955:14211/151‑1 (MQ=60)
CAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCC < LH00941:114:22FVMWLT1:2:2160:9487:20568/151‑1 (MQ=60)
CAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCC < LH00941:114:22FVMWLT1:2:2241:44433:17974/151‑1 (MQ=60)
CAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCC < LH00941:114:22FVMWLT1:2:1211:10051:17829/151‑1 (MQ=60)
AACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTA < LH00941:114:22FVMWLT1:2:2111:19490:11761/151‑1 (MQ=60)
ACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTAT > LH00941:114:22FVMWLT1:2:1139:13287:14883/1‑151 (MQ=60)
ACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG < LH00941:114:22FVMWLT1:2:2170:47761:26845/151‑1 (MQ=60)
ACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG < LH00941:114:22FVMWLT1:2:2168:2035:9135/151‑1 (MQ=60)
ACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG < LH00941:114:22FVMWLT1:2:2162:50609:23290/151‑1 (MQ=60)
ACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG < LH00941:114:22FVMWLT1:2:2213:39505:9983/151‑1 (MQ=60)
ACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG < LH00941:114:22FVMWLT1:2:1242:18612:28206/151‑1 (MQ=60)
ACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG < LH00941:114:22FVMWLT1:2:1238:47456:23658/151‑1 (MQ=60)
ACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG < LH00941:114:22FVMWLT1:2:1227:49869:1897/151‑1 (MQ=60)
ACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG < LH00941:114:22FVMWLT1:2:1227:49878:1913/151‑1 (MQ=60)
ACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG < LH00941:114:22FVMWLT1:2:2240:45339:9487/151‑1 (MQ=60)
ACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG < LH00941:114:22FVMWLT1:2:1237:20562:3274/151‑1 (MQ=60)
ACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG < LH00941:114:22FVMWLT1:2:2240:44368:10528/151‑1 (MQ=60)
ACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTAGCG < LH00941:114:22FVMWLT1:2:2229:43176:10031/151‑1 (MQ=60)
CAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGC < LH00941:114:22FVMWLT1:2:2243:13102:3194/151‑1 (MQ=60)
TACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGA < LH00941:114:22FVMWLT1:2:1118:52032:3370/151‑1 (MQ=60)
GACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGA < LH00941:114:22FVMWLT1:2:1118:52014:3370/151‑1 (MQ=60)
GAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGC < LH00941:114:22FVMWLT1:2:2123:26978:24026/151‑1 (MQ=60)
GAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGC < LH00941:114:22FVMWLT1:2:2262:30002:21801/151‑1 (MQ=60)
GAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGC < LH00941:114:22FVMWLT1:2:1202:33191:5996/151‑1 (MQ=60)
GAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGC < LH00941:114:22FVMWLT1:2:1264:17955:15508/151‑1 (MQ=60)
GAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGC < LH00941:114:22FVMWLT1:2:2212:40541:4731/151‑1 (MQ=60)
GAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGC < LH00941:114:22FVMWLT1:2:2213:17382:11344/151‑1 (MQ=60)
GAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGC < LH00941:114:22FVMWLT1:2:2242:34800:22169/151‑1 (MQ=60)
GAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGC < LH00941:114:22FVMWLT1:2:2262:30020:21801/151‑1 (MQ=60)
GAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGC < LH00941:114:22FVMWLT1:2:2125:48519:28798/151‑1 (MQ=60)
GAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGC < LH00941:114:22FVMWLT1:2:1111:33681:12833/151‑1 (MQ=60)
GAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGC < LH00941:114:22FVMWLT1:2:2128:5475:15700/151‑1 (MQ=60)
GAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGC < LH00941:114:22FVMWLT1:2:2234:5595:14179/151‑1 (MQ=60)
GAGGGGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTNCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGC < LH00941:114:22FVMWLT1:2:2261:25213:8446/151‑1 (MQ=60)
CCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGTCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGA > LH00941:114:22FVMWLT1:2:2257:19453:28510/1‑151 (MQ=60)
GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGG > LH00941:114:22FVMWLT1:2:2115:38008:6749/1‑151 (MQ=60)
GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGG > LH00941:114:22FVMWLT1:2:2156:46402:20552/1‑151 (MQ=60)
GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGG > LH00941:114:22FVMWLT1:2:2162:27829:12209/1‑151 (MQ=60)
GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGG > LH00941:114:22FVMWLT1:2:2124:37435:10656/1‑151 (MQ=60)
GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGG > LH00941:114:22FVMWLT1:2:2159:13166:8878/1‑151 (MQ=60)
GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGG > LH00941:114:22FVMWLT1:2:2101:2941:26813/1‑151 (MQ=60)
GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGG > LH00941:114:22FVMWLT1:2:2209:27921:22009/1‑151 (MQ=60)
GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGG > LH00941:114:22FVMWLT1:2:1226:39598:4667/1‑151 (MQ=60)
GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGG > LH00941:114:22FVMWLT1:2:2213:46763:12017/1‑151 (MQ=60)
GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGG > LH00941:114:22FVMWLT1:2:2216:43231:1705/1‑151 (MQ=60)
GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGG > LH00941:114:22FVMWLT1:2:2218:50433:15171/1‑151 (MQ=60)
GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGG > LH00941:114:22FVMWLT1:2:2230:35068:3546/1‑151 (MQ=60)
GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGG > LH00941:114:22FVMWLT1:2:1160:11623:20392/1‑151 (MQ=60)
GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAAACAAGGTCAGG > LH00941:114:22FVMWLT1:2:2159:29502:7069/1‑151 (MQ=60)
CTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTT > LH00941:114:22FVMWLT1:2:2268:24723:17845/1‑151 (MQ=60)
CGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATC > LH00941:114:22FVMWLT1:2:2210:27764:21256/1‑151 (MQ=60)
CGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATC > LH00941:114:22FVMWLT1:2:2210:27774:21240/1‑151 (MQ=60)
GAAAGGGGCGCGAAGTGGCCCCAGGCTTTCATTGCCACTGCGTGAACCGCTGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGC < LH00941:114:22FVMWLT1:2:1116:36945:25916/151‑1 (MQ=60)
AAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAG > LH00941:114:22FVMWLT1:2:1114:35983:23514/1‑151 (MQ=60)
AAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAG > LH00941:114:22FVMWLT1:2:1125:17650:13858/1‑151 (MQ=60)
AAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAG > LH00941:114:22FVMWLT1:2:2106:39811:17493/1‑151 (MQ=60)
GCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTT > LH00941:114:22FVMWLT1:2:2207:16837:23402/1‑151 (MQ=60)
GCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTT > LH00941:114:22FVMWLT1:2:2141:15505:15972/1‑151 (MQ=60)
GCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTT > LH00941:114:22FVMWLT1:2:1167:26100:21128/1‑151 (MQ=60)
GCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTT > LH00941:114:22FVMWLT1:2:1160:34180:12161/1‑151 (MQ=60)
GCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTT > LH00941:114:22FVMWLT1:2:1213:50220:29727/1‑151 (MQ=60)
GCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTT > LH00941:114:22FVMWLT1:2:1225:8470:25916/1‑151 (MQ=60)
GCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTT > LH00941:114:22FVMWLT1:2:1242:29807:3018/1‑151 (MQ=60)
GCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTT > LH00941:114:22FVMWLT1:2:1160:34190:12177/1‑151 (MQ=60)
GCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTT > LH00941:114:22FVMWLT1:2:1267:8479:14114/1‑151 (MQ=60)
AGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAAT > LH00941:114:22FVMWLT1:2:2102:30963:23274/1‑151 (MQ=60)
GGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATG > LH00941:114:22FVMWLT1:2:1159:38636:24171/1‑151 (MQ=60)
GGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATG > LH00941:114:22FVMWLT1:2:1163:16698:16180/1‑151 (MQ=60)
GGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATG > LH00941:114:22FVMWLT1:2:1211:42159:18294/1‑151 (MQ=60)
GGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATG > LH00941:114:22FVMWLT1:2:1159:38646:24155/1‑151 (MQ=60)
GGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATG > LH00941:114:22FVMWLT1:2:1251:11105:2906/1‑151 (MQ=60)
GGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATG > LH00941:114:22FVMWLT1:2:1125:43915:16693/1‑151 (MQ=60)
TTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCNTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGAC > LH00941:114:22FVMWLT1:2:2232:22753:21352/1‑151 (MQ=60)
TTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGAC > LH00941:114:22FVMWLT1:2:1132:33293:29423/1‑151 (MQ=60)
TTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGAC > LH00941:114:22FVMWLT1:2:1111:38904:23066/1‑151 (MQ=60)
TTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGAC > LH00941:114:22FVMWLT1:2:2252:16929:27373/1‑151 (MQ=60)
TTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGAC > LH00941:114:22FVMWLT1:2:2259:37545:21641/1‑151 (MQ=60)
TTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGAC > LH00941:114:22FVMWLT1:2:2259:37555:21624/1‑151 (MQ=60)
TTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGAC > LH00941:114:22FVMWLT1:2:2101:29872:12865/1‑151 (MQ=60)
TTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGAC > LH00941:114:22FVMWLT1:2:2219:11271:9407/1‑151 (MQ=60)
TTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGAC > LH00941:114:22FVMWLT1:2:2141:15210:17958/1‑151 (MQ=60)
TTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGAC > LH00941:114:22FVMWLT1:2:1258:39089:3466/1‑151 (MQ=60)
TTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGAC > LH00941:114:22FVMWLT1:2:1259:11068:6973/1‑151 (MQ=60)
CATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCA > LH00941:114:22FVMWLT1:2:2114:4846:19511/1‑151 (MQ=60)
CATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCA > LH00941:114:22FVMWLT1:2:1238:4393:8254/1‑151 (MQ=60)
GCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTC > LH00941:114:22FVMWLT1:2:1130:52088:28894/1‑151 (MQ=60)
GCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTC > LH00941:114:22FVMWLT1:2:1227:46874:8270/1‑151 (MQ=60)
CCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCC > LH00941:114:22FVMWLT1:2:2227:17465:14531/1‑151 (MQ=60)
CCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCC > LH00941:114:22FVMWLT1:2:1158:6039:18790/1‑151 (MQ=60)
CCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCC > LH00941:114:22FVMWLT1:2:1158:6029:18774/1‑151 (MQ=60)
CCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCC > LH00941:114:22FVMWLT1:2:2166:40735:13298/1‑151 (MQ=60)
CCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCC > LH00941:114:22FVMWLT1:2:2166:40726:13314/1‑151 (MQ=60)
CCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTACAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCC > LH00941:114:22FVMWLT1:2:1132:9912:12946/1‑151 (MQ=60)
CTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGT > LH00941:114:22FVMWLT1:2:1160:26100:16677/1‑151 (MQ=60)
CTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGT > LH00941:114:22FVMWLT1:2:2102:28384:20408/1‑151 (MQ=60)
CTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGT > LH00941:114:22FVMWLT1:2:2266:43666:10848/1‑151 (MQ=60)
GCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTAC > LH00941:114:22FVMWLT1:2:2233:37703:28862/1‑151 (MQ=60)
GCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTAC > LH00941:114:22FVMWLT1:2:2233:37684:28862/1‑151 (MQ=60)
GCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTAC > LH00941:114:22FVMWLT1:2:2230:12926:14803/1‑151 (MQ=60)
GCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTAC > LH00941:114:22FVMWLT1:2:2125:14442:20023/1‑151 (MQ=60)
GCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTAC > LH00941:114:22FVMWLT1:2:1258:17438:27934/1‑151 (MQ=60)
GCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCACCTCACATCCCAACCAAGGTCAGGTTGCAGATCCACGTCACGCACCAACCTTTCCAATGCGAACAGGTCCGGTAC > LH00941:114:22FVMWLT1:2:1209:33496:22441/1‑151 (MQ=60)
GCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCAACAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTAC > LH00941:114:22FVMWLT1:2:2230:12935:14787/1‑151 (MQ=60)
GG‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGC > LH00941:114:22FVMWLT1:2:2130:22005:28446/1‑151 (MQ=60)
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CACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGC‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGC > AE015451_phaM1/5681270‑5681564
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |