Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F84 I10 R1
|
267 |
426.1 |
13521957 |
97.0% |
13116298 |
150.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,588,787 |
G→A |
P132S (CCG→TCG) |
ugpC ← |
sn‑glycerol‑3‑phosphate ABC transporter ATPase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,588,787 | 0 | G | A | 96.3%
| 1337.9
/ 24.2
| 412 | P132S (CCG→TCG) | ugpC | sn‑glycerol‑3‑phosphate ABC transporter ATPase |
| Reads supporting (aligned to +/- strand): ref base G (8/7); new base A (156/237); total (167/245) |
| Fisher's exact test for biased strand distribution p-value = 2.98e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.74e-01 |
Only 100 of 416 total aligned reads displayed.
TGCAACTGTTGCAGTTCAAGACGCATCTGCACGCGCAGCTTGGCATCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGGGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGTTCTG > NC_000913/3588639‑3588934
|
tGCAACTGTTGCAGTTCAAGACGCATCTGCACGCGCAGCTTGGCATCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGc > 1:1011738/1‑151 (MQ=255)
tGCAACTGTTGCAGTTCAAGACGCATCTGCACGCGCAGCTTGGCATCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGc > 8:1549416/1‑151 (MQ=255)
ggCAACTGTTGCAGTTCAAGACGCATCTGCACGCGCAGCTTGGCATCGAGGTTAGAGAGCGGCTCATCACACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGc < 4:1252381/150‑1 (MQ=255)
gtGTTGCAGTTCAAGACGCATCTGCACGCGCAGCTTGGCATCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGt < 5:134142/150‑1 (MQ=255)
gTTGCAGTTCAAGACGCATCTGCACGCGCAGCTTGGCATCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGtt < 8:463521/150‑1 (MQ=255)
tccAGTTCACGAGGCAGCTCCACGCGCTGGTGGGCATCGCGGTTCGCGACCGGCGCATCAAACA‑GCACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGa < 1:1398396/148‑1 (MQ=255)
tGCAGTTCAAGACGCATCTGCACGCGCAGCTTGGCATCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTg > 8:713464/1‑150 (MQ=255)
tGCAGTTCAAGACGCATCTGCACGCGCAGCTTGGCATCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTg > 2:548940/1‑150 (MQ=255)
gCAGTTCAAGACGCATCTGCACGCGCAGCTTGGCATCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTg > 2:1386005/1‑149 (MQ=255)
gCAGTTCAAGACGCATCTGCACGCGCAGCTTGGCATCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAg < 7:469682/151‑1 (MQ=255)
aGTTCAAGACGCATCTGCACGCGCAGCTTGGCATCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGGGCGACGTTTGAGc > 6:1236756/1‑150 (MQ=255)
ttCAAGACGCATCTGCACGCGCAGCTTGGCATCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTGTGAGc > 2:1338538/1‑148 (MQ=255)
aaGACGCATCTGCACGCGCAGCTTGGCATCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCg > 6:527580/1‑151 (MQ=255)
aaGACGCATCTGCACGCGCAGCTTGGCATCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCg < 5:672677/151‑1 (MQ=255)
gACGCATCTGCACGCGCAGCTTGGCATCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGCCCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTc > 1:1562223/1‑151 (MQ=255)
aCGCATCTGCACGCGCAGCTTGGCATCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTcc < 2:596687/151‑1 (MQ=255)
cGCATCTGCACGCGCAGCTTGGCATCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCa < 2:1091938/151‑1 (MQ=255)
cGCATCTGCACGCGCAGCTTGGCATCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCa < 1:1479970/151‑1 (MQ=255)
cTGCACGCGCAGCTTGGCATCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTcc > 8:326893/1‑151 (MQ=255)
cTGCACGCGCAGCTTGGCATCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCACGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCCCCGGAAAGCTCCCGCGAGCGCCGTATGAGCAGACCGTCCAGCTcc > 3:1443221/1‑151 (MQ=255)
gCACGCGCAGCTTGGCATCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAg < 4:197489/151‑1 (MQ=255)
gCAAGCGCAGCTTGGCATCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTTGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTc < 7:140438/148‑1 (MQ=255)
aCGGGCAGGTTGGCATCGAGGTTAGAGAGCGGCTCATCAAACTGGAACACCGCCGGATCGCGCAGAATCGCGCTGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGaa < 3:1562887/151‑1 (MQ=255)
cgcgCAGCTTGGCATCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAAt < 6:392473/151‑1 (MQ=255)
cgcgCAGCTTGGCATCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAAt < 8:1172777/151‑1 (MQ=255)
gcgcAGCTTGGCATCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATg < 4:643028/151‑1 (MQ=255)
cgcAGCTTGGCATCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATgc < 2:905155/151‑1 (MQ=255)
gcAGCTTGGCATCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATgcg > 3:777708/1‑151 (MQ=255)
gCTTGGCATCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGAGCGGTCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATgcgcgc > 8:625687/1‑151 (MQ=255)
tGGCATCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGcgccgc > 1:681205/1‑151 (MQ=255)
tGGCATCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGcgccg < 5:1492446/150‑1 (MQ=255)
gCATCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGctt > 2:1188231/1‑151 (MQ=255)
cagcgcggTTAGAGAGCGGCTCATCAAACAGCACCACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGcttc < 1:946798/145‑1 (MQ=255)
aTCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGcttct > 8:913307/1‑151 (MQ=255)
cGAGGTTAGAGAGCGGCTCATCAAACAGGACCACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCttt < 5:687215/151‑1 (MQ=255)
aGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTaa < 8:1048592/151‑1 (MQ=255)
aGGTTAGAGAGCGGCTCATCAAAAAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCCCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGAATCTTTa > 8:782170/1‑150 (MQ=255)
ggTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAAc < 5:1028474/151‑1 (MQ=255)
gTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAAcg < 3:680325/151‑1 (MQ=255)
cgagCGGCGCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGGGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTc < 4:1379978/150‑1 (MQ=255)
gCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGc < 3:200811/151‑1 (MQ=255)
ggCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCTCACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCaa < 1:771658/151‑1 (MQ=255)
cTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAAtt > 7:1090449/1‑151 (MQ=255)
tcatcaAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAAttt > 3:1210354/1‑151 (MQ=255)
gcatcaAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCACACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAAttt < 8:1345483/150‑1 (MQ=255)
catcaAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAAtt < 1:570608/149‑1 (MQ=255)
catcaAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAAtt < 6:1624195/149‑1 (MQ=255)
atcaAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTtgc < 6:636592/151‑1 (MQ=255)
tcaAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTtgct > 3:1120555/1‑151 (MQ=255)
aaaCAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTtgctgc < 3:513792/151‑1 (MQ=255)
aaCAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTgctgct < 8:871884/151‑1 (MQ=255)
aCAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGAGGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCtt < 4:294637/151‑1 (MQ=255)
aCAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCtt > 3:610840/1‑151 (MQ=255)
aCAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCtt < 1:608171/151‑1 (MQ=255)
aCAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCtt < 5:614476/151‑1 (MQ=255)
cAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTg < 5:784146/151‑1 (MQ=255)
ggAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGcc > 8:244428/1‑151 (MQ=255)
aaCACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGccc > 8:222064/1‑150 (MQ=255)
aaCACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCa < 6:1410411/151‑1 (MQ=255)
cacCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATg < 6:270655/151‑1 (MQ=255)
cctgATCTCTCACAATCGCGCGGCCCATCTCCACACGCTGGCGCTGACCGCAGTAAAGCTCGCTCGAGCGACGTTTGAGCAGACCGTCCAGATCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCcgcg < 7:985037/148‑1 (MQ=255)
ccgGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCcgcg < 4:74127/151‑1 (MQ=255)
cacaATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGc > 5:236961/1‑151 (MQ=255)
caATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGccc > 8:1455941/1‑151 (MQ=255)
caATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGccc < 4:444402/151‑1 (MQ=255)
caATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGccc > 4:883869/1‑151 (MQ=255)
aaTCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGcccc < 5:1132082/151‑1 (MQ=255)
aTCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGccccc < 6:1584663/151‑1 (MQ=255)
cgcgcgGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCa < 7:204106/150‑1 (MQ=255)
gcgcgGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACg < 8:1616434/151‑1 (MQ=255)
gcgGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGcc > 3:1398198/1‑151 (MQ=255)
gCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATg < 7:565716/151‑1 (MQ=255)
gCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATg < 2:1628182/151‑1 (MQ=255)
gCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATg < 3:1650529/151‑1 (MQ=255)
ccATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGGGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGtt < 4:366939/151‑1 (MQ=255)
ccATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGtt < 7:278492/151‑1 (MQ=255)
ccATCGCCACACGCTGGCGATGACCGCCGGAAAGCTCGCGCGGGCGACGTTTGAGCAGACCGTCCAGCTCCAGACTGCGCGCCCCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCACACGCCATGtt > 2:78246/1‑151 (MQ=255)
cATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGttt > 8:1270567/1‑151 (MQ=255)
cATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGttt < 2:197866/151‑1 (MQ=255)
aTCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGtttt > 3:1529502/1‑151 (MQ=255)
ccACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTttcttc > 3:974000/1‑151 (MQ=255)
ggCGCTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCat < 7:718382/151‑1 (MQ=255)
gcgcTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCata < 2:1247820/151‑1 (MQ=255)
cgcTGACCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACTCGCTCTTCAATTTGCTGATTGCCCATGCCGCGAATTTTCAGCCCCCACTCCATTTTTTCTTCGACACTCatat < 1:1255820/151‑1 (MQ=255)
aCCGCCGGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATATTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCgg > 6:758681/1‑150 (MQ=255)
cgccgGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATa < 1:252970/151‑1 (MQ=255)
gccgGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATa > 1:841780/1‑150 (MQ=255)
ccgGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATaaa < 6:1334990/151‑1 (MQ=255)
cgGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAg < 5:552672/151‑1 (MQ=255)
cgGAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGACGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATaa > 1:1138942/1‑149 (MQ=255)
ggAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCCCGCAATGTTTTCTTCGACACTCATATGCGGATaacgg > 2:1537465/1‑148 (MQ=255)
ggAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAgc < 2:974387/151‑1 (MQ=255)
ggAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAgc < 5:1393876/151‑1 (MQ=255)
ggAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAgc > 7:1625422/1‑151 (MQ=255)
ggAAAGCTCGCGCGAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAgc < 3:334938/151‑1 (MQ=255)
aaGCTCGCGCGGGCGACGTTTGAGCAGACCGTCCAGCTCGAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGcgcg < 3:571636/151‑1 (MQ=255)
cgcgcgAGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAg < 7:775543/149‑1 (MQ=255)
gcgcgGGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGTTc > 2:3267/1‑151 (MQ=255)
gcgagcgaCGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGTTCTg > 2:439339/1‑151 (MQ=255)
gcgagcgaCGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGTTCTg < 5:947564/151‑1 (MQ=255)
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TGCAACTGTTGCAGTTCAAGACGCATCTGCACGCGCAGCTTGGCATCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGCGGCCCATCGCCACACGCTGGCGCTGACCGCCGGAAAGCTCGCGCGGGCGACGTTTGAGCAGACCGTCCAGCTCCAGAATGCGCGCCGCTTCTTTAACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGTTCTG > NC_000913/3588639‑3588934
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
