Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F84 I10 R1
|
267 |
426.1 |
13521957 |
97.0% |
13116298 |
150.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,621,090 |
C→T |
R633R (CGC→CGT) |
rhsB → |
Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,621,090 | 0 | C | T | 96.5%
| 723.8
/ 24.3
| 395 | R633R (CGC→CGT) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
| Reads supporting (aligned to +/- strand): ref base C (6/8); new base T (201/180); total (207/188) |
| Fisher's exact test for biased strand distribution p-value = 5.89e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.06e-01 |
Only 100 of 399 total aligned reads displayed.
TGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTG > NC_000913/3620942‑3621234
|
ggAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAg < 3:781510/150‑1 (MQ=14)
gACACGCAGGGCCATGAAACTCGGTATGAATACAACATCTCCGGTGACCTGACCTCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTAAGATGCGTGTGGAAAGGCCGTCCGTACCACTCAGGGAGGTCTGACGCGTAGTATgg < 2:8903/151‑1 (MQ=11)
gACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGCCGCGTAGTATgg > 3:1058696/1‑151 (MQ=14)
gACACGCAGGGCCATCAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATgg < 8:542706/151‑1 (MQ=14)
acGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAAt > 8:1286650/1‑151 (MQ=14)
cGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAAt > 7:931568/1‑150 (MQ=14)
gCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATAc > 3:622309/1‑151 (MQ=14)
cAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACg > 4:1633950/1‑151 (MQ=14)
aGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACg > 1:1224882/1‑150 (MQ=14)
ccATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGAtgct < 6:1242212/151‑1 (MQ=14)
cATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGAtgctg < 6:1481036/151‑1 (MQ=14)
aTGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGAtgctgc < 8:1245437/151‑1 (MQ=31)
tGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGcc > 6:895512/1‑151 (MQ=14)
aaCGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGCCGCGTAGTATGGAATACGATGCTGACgg > 4:394027/1‑150 (MQ=9)
ggTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAACCGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGt < 7:169669/151‑1 (MQ=14)
tATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTc > 7:1141108/1‑150 (MQ=14)
aTGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCAt < 6:432600/151‑1 (MQ=14)
gAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATcc > 1:884700/1‑151 (MQ=14)
gAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATcc < 2:593346/151‑1 (MQ=14)
gAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATcc < 4:1567443/151‑1 (MQ=14)
gAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATcc < 8:1668333/151‑1 (MQ=14)
aaTACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCg > 5:1294864/1‑151 (MQ=14)
aaTACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCg < 1:176032/151‑1 (MQ=14)
aTACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGc > 8:367349/1‑151 (MQ=14)
tACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGcc > 5:229722/1‑151 (MQ=14)
acaacaTCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCt > 1:1053628/1‑151 (MQ=14)
caacaTCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGCCGCGTAGTATGGAATACGATGCTGCCGGACGGGTCCTCCGCCTg > 4:1073641/1‑151 (MQ=9)
aTCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGAcc > 1:459058/1‑150 (MQ=14)
cGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGt < 4:476919/151‑1 (MQ=14)
ccGGTGACCTGACCGCCGTCATTGCCCCTGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGa < 3:892800/151‑1 (MQ=14)
ccGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGa < 5:1006551/151‑1 (MQ=14)
cGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGa > 2:290428/1‑150 (MQ=14)
gTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGaaaa < 5:1634421/151‑1 (MQ=14)
gTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGACCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGaaaa < 1:671621/151‑1 (MQ=14)
gacctgaccGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACg < 6:1224335/151‑1 (MQ=14)
gacctgaccGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACg < 8:1510372/151‑1 (MQ=31)
ctgaccGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGc > 3:239644/1‑150 (MQ=14)
tgaccGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGc > 6:553238/1‑149 (MQ=14)
tgaccGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGc > 6:1036455/1‑149 (MQ=14)
gaccGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGCCCAGTGAAAACGGCAGc > 8:945720/1‑151 (MQ=14)
gaccGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGc < 4:1182938/151‑1 (MQ=14)
accGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGCCGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGcc > 7:1261187/1‑151 (MQ=14)
cgccgTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCcac > 2:1579069/1‑151 (MQ=14)
cgTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCAcacc < 8:1002288/151‑1 (MQ=14)
gTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGCCGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCAcaccc > 4:702512/1‑150 (MQ=14)
gTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGCCGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCAcacca < 8:1212247/151‑1 (MQ=14)
aTTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCt < 8:851486/151‑1 (MQ=14)
tGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCtt < 2:1491329/150‑1 (MQ=14)
tGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGGCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCtt < 4:826326/150‑1 (MQ=14)
gCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGTGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTcc < 6:354537/151‑1 (MQ=14)
gCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTcc < 7:1075359/151‑1 (MQ=14)
ccccGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCg > 3:985720/1‑151 (MQ=14)
gACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACg < 1:1532603/151‑1 (MQ=14)
aCGGCAGCAGAAACGTGACACAGTACGATGCGTGGGGAAAGGCGGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGa < 1:326029/151‑1 (MQ=9)
aCGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACg > 8:257221/1‑150 (MQ=14)
agAAACGGGACACAGTACGATGCGGGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTg < 1:566735/151‑1 (MQ=14)
gAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTg > 5:884312/1‑150 (MQ=14)
aaCGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGAcc < 4:546124/151‑1 (MQ=14)
aaCGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGAcc < 7:602059/151‑1 (MQ=14)
cacaGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGAt < 5:412306/151‑1 (MQ=14)
cacaGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGAt > 3:315454/1‑151 (MQ=14)
cacaGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGAt < 3:4403/151‑1 (MQ=14)
acaGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATa < 2:1047363/151‑1 (MQ=14)
acaGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATa < 4:1304757/151‑1 (MQ=14)
aGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATAc > 2:1330892/1‑150 (MQ=14)
gTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATAc > 7:642239/1‑149 (MQ=14)
tACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAgg > 4:1345229/1‑151 (MQ=14)
aCGATGCGTGGGGAAACGCCGTCCGGACCACGCAGGGCGGGCTGACGCGTAGGATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAgg < 2:931566/150‑1 (MQ=9)
cGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGaa < 6:250399/151‑1 (MQ=14)
cGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGa > 8:1416195/1‑150 (MQ=14)
gATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGaa > 2:41337/1‑150 (MQ=14)
tGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAAcc > 5:1196244/1‑151 (MQ=14)
gCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAAcc < 7:391485/150‑1 (MQ=14)
gCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAAcc < 3:152459/150‑1 (MQ=14)
gCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCg < 6:1605071/151‑1 (MQ=14)
gTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGc > 3:853088/1‑151 (MQ=14)
nngggAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCt > 2:233044/3‑151 (MQ=14)
gggggAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCt < 5:1536238/150‑1 (MQ=14)
gAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGCAACCGGCTTTgc > 1:1584391/1‑150 (MQ=14)
aaaGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGAc < 3:1635064/151‑1 (MQ=14)
aaaGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGAc < 5:533546/151‑1 (MQ=14)
ccgtccgtACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCg < 2:787014/151‑1 (MQ=14)
cgtccgtACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGc < 5:960816/151‑1 (MQ=14)
tccgtACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGcac > 2:176855/1‑151 (MQ=14)
ccgtACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGcaca < 3:1200455/151‑1 (MQ=14)
gtACCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGcacac > 6:1682815/1‑150 (MQ=14)
gtACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGcacaca < 2:1212544/151‑1 (MQ=31)
aCCACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAg < 4:262058/150‑1 (MQ=14)
cACGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCCTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTATGACCGCCGCACACAGcct > 3:1367861/1‑149 (MQ=255)
aCGCAGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGtt > 5:1471063/1‑151 (MQ=14)
aGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATca < 1:918203/151‑1 (MQ=14)
aGGGCGGGCTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATc > 5:690956/1‑150 (MQ=14)
gggcgggcTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATcac > 6:1069971/1‑151 (MQ=14)
gggcgggcTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATcac > 6:1137970/1‑151 (MQ=14)
gggcgggcTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATcac > 6:1405250/1‑151 (MQ=31)
gcgggcTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATcacca < 6:824964/151‑1 (MQ=14)
gggcTGACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACg > 4:174200/1‑151 (MQ=14)
gACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGAcc < 7:288188/149‑1 (MQ=11)
gACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGAcc < 7:1554068/149‑1 (MQ=11)
gACGCGTAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTg > 7:759347/1‑151 (MQ=11)
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TGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTG > NC_000913/3620942‑3621234
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
