Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F84 I10 R1
|
267 |
426.1 |
13521957 |
97.0% |
13116298 |
150.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,160,157 |
G→A |
L212L (CTG→TTG) |
sthA ← |
pyridine nucleotide transhydrogenase, soluble |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,160,157 | 0 | G | A | 97.7%
| 1474.9
/ 13.4
| 434 | L212L (CTG→TTG) | sthA | pyridine nucleotide transhydrogenase, soluble |
| Reads supporting (aligned to +/- strand): ref base G (3/7); new base A (224/199); total (227/207) |
| Fisher's exact test for biased strand distribution p-value = 2.04e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.86e-01 |
Only 100 of 440 total aligned reads displayed.
TCAGTTTTTTACCCGACTTCAGATGCATGATCACACCATCGTCACAGCCTTCGATCTTCTCGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAGCAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCGTGGTGCATGCTGAGAATTGAGTCGCTGTCGTAAAT > NC_000913/4160010‑4160304
|
tCAGATTTTTACCCGACTTCAGATGCATGATCACACCATCGTCACAGCCTTCGATCTTCTCCTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCcaaca < 3:446522/150‑1 (MQ=255)
cAGTTTTTTACCCGACTTCAGATGCATGATCACCCCCTCGTCACAGCCTTCGATCTTCTCGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAgg < 8:1547931/151‑1 (MQ=255)
cAGTTTTTTACCCGACTTCAGATGCATGATCACACCATCGTCACAGCCTTCGATCTTCTCGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCcaacag < 1:679030/150‑1 (MQ=255)
cAGTTTTTTACCCGACTTCAGATGCATGATCACACCATCGTCACAGCCTTCGATCTTCTCGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAgg < 4:1423591/151‑1 (MQ=255)
cAGTTTTTTACCCGACTTCAGATGCATGATCACACCATCGTCACAGCCTTCGATCTTCTCGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAgg < 3:900826/151‑1 (MQ=255)
aGTTTTTTACCCGACTTCAGATGCATGATCACACCATCGTCACAGCCTTCGATCTTCTCGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGc < 2:606129/151‑1 (MQ=255)
aGTTTTTTACCCGACTTCAGATGCATGATCACACCATCGTCACAGCCTTCGATCTTCTCGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGc > 3:1260919/1‑151 (MQ=255)
tttttACCCGACTTCAGATGCATGATCACACCATCGTCACAGCCTTCGATCTTCTCGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGa < 7:922935/150‑1 (MQ=255)
tttttACCCGACTTCAGATGCATGATCACACCATCGTCACAGCCTTCGATCTTCTCGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGAt > 2:1298129/1‑151 (MQ=255)
tACCCGACTTCAGATGCATGATCACACCATCGTCACAGCCTTCGATCTTCTCGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAGCAGGCGATcgc < 5:1367644/150‑1 (MQ=255)
aCCCGACTTCAGATGCATGATCACACCATCGTCACAGCCTTCGATCTTCTCGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCgg < 7:1245187/151‑1 (MQ=255)
cccGACTTCAGATGCATGATCACACCATCGTCACAGCCTTCGATCTTCTCGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCggg > 4:1201630/1‑151 (MQ=255)
cccGACTTCAGATGCATGATCACACCATCGTCACAGCCTTCGATCTTCTCGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCggg > 2:1368277/1‑151 (MQ=255)
ccGACTTCAGATGCATGATCACACCATCGTCACAGCCTTCGATCTTCTCGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGgt > 2:1448622/1‑151 (MQ=255)
tCAGATGCATGATCACACCATCGTGACAGCCTTCTATCTTCTCGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATATGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGa < 4:232600/150‑1 (MQ=255)
tCAGATGCATGATCACACCATCGTCACAGCCTTCGATCTTCTCGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGAt > 8:659716/1‑151 (MQ=255)
gATGCATGATCACACCATCGTCACAGCCTTCGATCTTCTCGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAg < 6:358018/151‑1 (MQ=255)
aTGCATGATCACACCATCGTCACAGCCTTCGATCTTCTCGTACTCTTCTTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGa < 5:437438/151‑1 (MQ=255)
tGCATGATCACACCATCGTCACAGCCTTCGATCTTCTCGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATc > 7:1657142/1‑147 (MQ=255)
gCATGATCACACCATGGTCACAGCCTTCGAGCTTCTCGTACTCTTCGTTGTGACGAATGACTACGCGACTGTTCCAGATGTGATAGGAGAGAGAATCTGTCATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATc < 3:1504667/151‑1 (MQ=255)
aTGATCACACCATCGTCACAGCCTTCGATCTTCTCGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATcc > 8:1130792/1‑150 (MQ=255)
cATCGTCACAGCCTTCGATCTTCTCGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATc > 1:173755/1‑151 (MQ=255)
aTCGTCACAGCCTTCGATCTTCTCGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATcc > 3:586900/1‑151 (MQ=255)
tCGTCACAGCCTTCGATCTTCTCGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATcc > 6:1315872/1‑150 (MQ=255)
tCACAGCCTTCGATCTTCTCGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATAc > 3:242986/1‑151 (MQ=255)
tCACAGCCTTCGATCTTCTCGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATAc > 5:1585745/1‑151 (MQ=255)
tCACAGCCTTCGATCTTCTCGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTCATAGGAGAGAGAATCTGACATCACTTGATCCAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACATTTACATCCATAc > 7:118280/1‑151 (MQ=255)
gcacaGCCTTCGATCTTCTCGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATAc < 4:29257/150‑1 (MQ=255)
caGCCTTCGATCTTCTCGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACcgc > 5:1022467/1‑151 (MQ=255)
caGCCTTCGATCTTCTCGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACcgc > 7:649410/1‑151 (MQ=255)
aGCCTTCGATCTTCTCGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACcgcg > 8:404440/1‑151 (MQ=255)
cTTCGATCTTCTCGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGa > 8:1249167/1‑150 (MQ=255)
cTTCGATCTTCTCGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGa > 1:798911/1‑150 (MQ=255)
ttCGATCTTCTCGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGa > 2:1117188/1‑149 (MQ=255)
cGATCTTCTCGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGa < 7:822816/150‑1 (MQ=255)
tctcGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCg < 2:335903/147‑1 (MQ=255)
tctcGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGAc < 1:563544/149‑1 (MQ=255)
tctcGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACg < 8:257734/150‑1 (MQ=255)
aCTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTc < 4:1656125/151‑1 (MQ=255)
tctTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTcac > 5:235854/1‑151 (MQ=255)
ctTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTca < 5:1221755/149‑1 (MQ=255)
ttCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTcac > 1:1643965/1‑149 (MQ=255)
gTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCg > 2:1015274/1‑151 (MQ=255)
ttGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCg > 6:57589/1‑150 (MQ=255)
gACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTTATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCa < 4:1264770/150‑1 (MQ=255)
gACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCAc > 6:535686/1‑151 (MQ=255)
cGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATNTGACATCTCTTGNTCGAGAANTGCCAACAGGCGATCGCGGGTNTNGANTAGNTNCNCTTTTACATCCATACCGNGGAANATCGACGNATATTCACAGCCGATCNCTc > 8:807502/1‑151 (MQ=255)
gAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTcc < 7:528782/151‑1 (MQ=255)
aaTCACTACGGCAATGTTCCAGAAGTGATATGAGATAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGGTGATCAGATCCACTTTTACATCCATACCGCGGAAGAGCGACGCATATTCACAGCCGATCACTc < 5:1684760/149‑1 (MQ=255)
aaTCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTcc > 1:342937/1‑150 (MQ=255)
aTCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTcc > 4:454702/1‑149 (MQ=255)
aTCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTcc > 2:978304/1‑149 (MQ=255)
tCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGc > 6:1175050/1‑151 (MQ=255)
cGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATa < 3:1606712/151‑1 (MQ=255)
gCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATac > 6:720966/1‑150 (MQ=255)
gTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAGCAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATaa < 5:1648632/149‑1 (MQ=255)
gTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGt < 5:311319/151‑1 (MQ=255)
ccAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAGCAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACa < 4:687087/151‑1 (MQ=255)
ccAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACa < 5:1328734/151‑1 (MQ=255)
cataaGTGATAGTAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACAt < 7:100938/148‑1 (MQ=255)
gTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGgcgc < 6:920595/151‑1 (MQ=255)
gTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGgcgc < 6:223343/151‑1 (MQ=255)
gATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCgg > 2:175212/1‑151 (MQ=255)
aTAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGt > 1:1291218/1‑151 (MQ=255)
aGGAGATAGTATGTCAGATATCTTGATGCAGTAATGCCTAGATGCTATGGCGGGTGTTTATCAGATCAAATTTATCATCCATAGAGAGGATCATACACGCATATTCACATACTTTCACTCCAGCACCATAGATAAGTACATGGCGCTGtt < 2:485784/150‑1 (MQ=255)
aGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGtt < 1:1200519/150‑1 (MQ=255)
agagagaATCTGACATCTCTTGATCGAGAAATTCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCTTACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCgtg < 2:1519930/151‑1 (MQ=255)
agagagaATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCgtg < 2:1073306/151‑1 (MQ=255)
agagagaATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCgtg > 7:1489163/1‑151 (MQ=255)
gagaATCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCgtggtg > 7:235892/1‑151 (MQ=255)
aTCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCGTGGTGCATg > 4:613497/1‑151 (MQ=255)
tCTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCGTGGTGCATGc > 4:892949/1‑151 (MQ=255)
cTGACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCGTGGTGCATGCt > 7:1562286/1‑151 (MQ=255)
gACATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCGTGGTGCATGCTg < 3:1089542/150‑1 (MQ=255)
aCATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCGTGGTGCATGCTga < 2:862786/150‑1 (MQ=255)
aCATCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCGTGGTGCATGCTg > 7:443662/1‑149 (MQ=255)
cATATCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATAAACTTTTACATCCATACCACGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCGTGGTGCATGCTg > 4:1074001/1‑148 (MQ=255)
aTCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCGTGGTGCATGCTgaga > 8:101157/1‑150 (MQ=255)
aTCTCTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGAGCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCGTGGTGCATGCTgaga > 5:886229/1‑150 (MQ=255)
tctcTTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCGTGGTGCATGCTGAGAAt > 7:701511/1‑151 (MQ=255)
gtctTGATCGAGAAATACCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCGTGGTGCATGCTGAGAAtt < 8:1366507/150‑1 (MQ=255)
ctTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCGTGGTGCATGCTGAGAAtt < 1:139365/149‑1 (MQ=255)
ctTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCGTGGTGCATGCTGAGAAtt < 8:577781/149‑1 (MQ=255)
ctTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCGTGGTGCATGCTGAGAAt < 8:1466127/148‑1 (MQ=255)
ctTGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCGTGGTGCATGCTGAGAATTg > 6:1407993/1‑150 (MQ=255)
ttGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCGTGGTGCATGCTGAGAATTg > 7:1381214/1‑149 (MQ=255)
tGATCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCGTGGTGCATGCTGAGAATTGAGt > 5:517699/1‑151 (MQ=255)
gATCGAGAAATGCCACCAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCGTGGTGCATGCTGAGAATTGAGTc < 6:870305/151‑1 (MQ=255)
aTCGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCGTGGTGCATGCTGAGAATTGAGTCg > 2:1184905/1‑151 (MQ=255)
cGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCGTGGTGCATGCTGAGAATTGAGTCGCt > 4:1514887/1‑151 (MQ=255)
cGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCGTGGTGCATGCTGAGAATTGAGTCGCt > 5:79054/1‑151 (MQ=255)
cGAGAAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCGTGGTGCATGCTGAGAATTGAGTCGCt < 3:76409/151‑1 (MQ=255)
gaAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCGTGGTGCATGCTGAGAATTGAGTCGCTGTc < 3:1349233/151‑1 (MQ=255)
gaAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCGTGGTGCATGCTGAGAATTGAGTCGCTGTc < 5:57494/151‑1 (MQ=255)
gaAATGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACAGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCGTGGTGCATGCTGAGAATTGAGTCGATGTc > 6:1555706/1‑151 (MQ=255)
aaTGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCGTGGTGCATGCTGAGAATTGAGTCGCTGTCGt > 1:1560664/1‑151 (MQ=255)
aTGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCGTGGTGCATGCTGAGAATTGAGTCGCTGTCGTa < 5:1424402/151‑1 (MQ=255)
aTGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCGTGGTGCATGCTGAGAATTGAGTCGCTGTCGTa < 2:244854/151‑1 (MQ=255)
aTGCCAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCGTGGTGCATGCTGAGAATTGAGTCGCTGTCGTa < 5:1177296/151‑1 (MQ=255)
ccAACAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCGTGGTGCATGCTGAGAATTGAGTCGCTGTCGTAAAt < 5:1510308/151‑1 (MQ=255)
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TCAGTTTTTTACCCGACTTCAGATGCATGATCACACCATCGTCACAGCCTTCGATCTTCTCGTACTCTTCGTTGTGACGAATCACTACGCCACTGTTCCAGAAGTGATAGGAGAGAGAATCTGACATCTCTTGATCGAGAAATGCCAGCAGGCGATCGCGGGTGTTGATCAGATCCACTTTTACATCCATACCGCGGAAGATCGACGCATATTCACAGCCGATCACTCCAGCACCATAGATAAGTACATGGCGCGGTTCGTGGTGCATGCTGAGAATTGAGTCGCTGTCGTAAAT > NC_000913/4160010‑4160304
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
