Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F84 I10 R1
|
267 |
426.1 |
13521957 |
97.0% |
13116298 |
150.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,351,590 |
C→T |
V25I (GTC→ATC) |
dcuS ← |
sensory histidine kinase in two‑component regulatory system with DcuR, regulator of anaerobic fumarate respiration |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,351,590 | 0 | C | T | 97.6%
| 1584.6
/ 15.7
| 464 | V25I (GTC→ATC) | dcuS | sensory histidine kinase in two‑component regulatory system with DcuR, regulator of anaerobic fumarate respiration |
| Reads supporting (aligned to +/- strand): ref base C (3/8); new base T (215/237); total (219/245) |
| Fisher's exact test for biased strand distribution p-value = 2.30e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.31e-01 |
Only 100 of 464 total aligned reads displayed.
GCAAGCCCTGACGGATTTCCGGCGAGTCGGCGAGGGTACGCGCCACTGCCAGTGCCTTGTTGGCTAGCCCATCTCGCGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGACCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTAAGCATTATCTCTGATGAGGCGGGTAATTCAAAGGGAGTAAGAATGATT > NC_000913/4351443‑4351737
|
gCAAGCCCTGACGGATTTCCGGCGAGTCGGCGAGGGTACGCGCCACTGCCAGTGCCTTGTTGGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCa < 2:1452147/150‑1 (MQ=255)
gCAAGCCCTGACGGATTTCCGGCGAGTCGGCGAGGGTACGCGCCACTGCCAGTGCCTTGTTGGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCAt > 4:834339/1‑151 (MQ=255)
cAAGCCCTGACGGATTTCCGGCGAGTCGGCGAGGGTACGCGCCACTGCCAGTGCCTTGTTGGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCAtt > 6:141160/1‑151 (MQ=255)
aaGCCCTGACGGATTTCCGGCGAGTCGGCGAGGGTACGCGCCACTGCCAGTGCCTTGTTGGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTa < 1:1047695/151‑1 (MQ=255)
aaGCCCTGACGGATTTCCGGCGAGTCGGCGAGGGTACGCGCCACTGCCAGTGCCTTGTTGGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTa < 5:603983/151‑1 (MQ=255)
aaGCCCTGACGGATTTCCGGCGAGTCGGCGAGGGTACGCGCCACTGCCAGTGCCTTGTTGGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTa < 4:1310571/151‑1 (MQ=255)
aCGGATTTCCGGCGAGTCGGCGAGGGTACGCGCCACTGCCAGTGCCTTGTTGGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATGACt > 6:1112750/1‑151 (MQ=255)
cGGATTTCCGGCGAGTCGGCGAGGGTACGCGCCACTGCCAGTGCCTTGTTGGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACtg > 5:1421984/1‑151 (MQ=255)
ggATTTCCGGCGAGTCGGCGAGGGTACGCGCCACTGCCAGTGCCTTGTTGGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACtgt > 7:1643803/1‑151 (MQ=255)
gATTTCCGGCGAGTCGGCGAGGGTACGCGCCACTGCCAGTGCCTTGTTGGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACtgtg > 8:536017/1‑151 (MQ=255)
aTTTCCGGCGAGTCGGCGAGGGTACGCGCCACTGCCAGTGCCTTGTTGGCTAGCCCATCTCGCGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGACCATTAAGATCACTGTgg > 3:191492/1‑151 (MQ=255)
tCCGGCGAGTCGGCGAGGGTACGCGCCACTGCCAGTGCCTTGTTGGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTa < 2:1235115/150‑1 (MQ=255)
tCCGGCGAGTCGGCGAGGGTACGCGCCACTGCCAGTGCCTTGTTGGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTAc > 2:1284632/1‑151 (MQ=255)
cGGCGAGTCGGCGAGGGTACGCGCCACTGCCAGTGCCTTGTTGGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTc > 4:221061/1‑151 (MQ=255)
cGAGTCGGCGAGGGTACGCGCCACTGCCAGTGCCTTGTTGGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAAt < 3:892005/151‑1 (MQ=255)
gAGTCGGCGAGGGTACGCGCCACTGCCAGTGCCTTGTTGGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAAtt < 8:1260847/151‑1 (MQ=255)
aGTCGGCGAGGGTACGCGCCACTGCCAGTGCCTTGTTGGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAAttt < 7:1071577/151‑1 (MQ=255)
cGGCGAGGGTACGCGCCACTGCCAGTGCCTTGTTGGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCAt > 6:434959/1‑151 (MQ=255)
ggCGAGGGTACGCGCCACTGCCAGTGCCTTGTTGGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATc < 4:1011768/151‑1 (MQ=255)
ggCGAGGGTACGCGCCACTGCCAGTGCCTTGTTGGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATc < 8:1489466/151‑1 (MQ=255)
gAGGGTACGCGCCACTGCCAGTGCCTTGTTGGGTAGCACATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCCCCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCCATTTCATCggc > 8:765395/1‑150 (MQ=255)
aGGGTACGCGCCACTGCCAGTGCCTTGTTGGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGAc < 4:450906/151‑1 (MQ=255)
aGGGTACGCGCCACTGCCAGTGCCTTGTTGGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGAc < 7:1522599/151‑1 (MQ=255)
ggTACGCGCCACTGCCAGTGCCTTGTT‑GCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGtt < 6:1166847/151‑1 (MQ=255)
aCGCGCCACTGCCAGTGCCTTGTTGGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCCCCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTg > 3:117873/1‑151 (MQ=255)
gcgcCACTGCCAGTGCCTTGTTGGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCg < 8:195096/151‑1 (MQ=255)
cACTGCCAGTGCCTTGTTGGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAAc > 3:971077/1‑151 (MQ=255)
cTGCCAGTGCCTTGTTGGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACAt > 1:1004833/1‑151 (MQ=255)
gCCAGTGCCTTGTTGGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGc < 8:389251/151‑1 (MQ=255)
ccAGTGCCTTGTTGGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCg < 6:244315/151‑1 (MQ=255)
cAGTGCCTTGTTGGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCgg < 3:1606679/151‑1 (MQ=255)
cAGTGCCTTGTTGGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCgg > 5:443650/1‑151 (MQ=255)
aGTGCCTTGTTGGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGt > 8:616809/1‑151 (MQ=255)
aGTGCCTTGTTGGCTAGCCCATCTCGTGTCATATAACTGTTTTGCGATAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCATTTTCATCTGACGTTTGCGTAACATGCGGt < 1:1399307/151‑1 (MQ=255)
gCCTTGTTGGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCAGCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTGAATTTCATCGGACGTTTGCGTAACATGCGGTAgg < 3:613734/151‑1 (MQ=255)
gCCTTGTTGGCTAGCCCATCTCGCGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGACCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAgg > 3:392478/1‑151 (MQ=255)
cTTGTTGGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGc > 3:1478480/1‑151 (MQ=255)
cTTGTTGGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGc > 5:93298/1‑151 (MQ=255)
tgttgGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCa < 2:1081581/150‑1 (MQ=255)
gttgGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCaa < 5:1246024/150‑1 (MQ=255)
ttgGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCaatg > 5:801881/1‑151 (MQ=255)
ttgGCTAGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCaatg > 5:1538408/1‑151 (MQ=255)
atcccATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGt < 3:576445/148‑1 (MQ=255)
aGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATGGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGtc < 2:447743/151‑1 (MQ=255)
aGCCCATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCaatgaatg < 2:774154/149‑1 (MQ=255)
gCCCATCTCGCGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGACCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGtct < 8:1637797/151‑1 (MQ=255)
cccATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGtctc > 7:203751/1‑151 (MQ=255)
cATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCtcat < 1:762182/151‑1 (MQ=255)
cATCTCGTGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCtcat > 8:1586919/1‑151 (MQ=255)
ctcGCGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGACCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCtcatc > 8:474675/1‑149 (MQ=255)
cgtgTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCANCGGACGTTTGNGTAACATGCGGTAGGGCAATGAATGTCtcatc < 5:16288/144‑1 (MQ=255)
tatCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTtgt > 3:1318413/1‑151 (MQ=255)
tCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTtgtgt > 3:255656/1‑151 (MQ=255)
cACTGATTTGCTAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTtgtgt < 4:1582654/150‑1 (MQ=255)
cACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAAGAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTtgtgtg < 7:79368/151‑1 (MQ=255)
gATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGACCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACa < 2:84313/150‑1 (MQ=255)
aTTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACaaa < 3:471169/151‑1 (MQ=255)
aTTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACaa > 6:1551582/1‑150 (MQ=255)
ttGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAAtt > 1:1610711/1‑151 (MQ=255)
tGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAAtt < 2:961858/150‑1 (MQ=255)
gCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTc < 1:455694/151‑1 (MQ=255)
gagaAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCtt > 5:887354/1‑151 (MQ=255)
gagaAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCtt < 5:231713/151‑1 (MQ=255)
cagaAGTAAATAACATGCACCACCAATAGCACAGATAACAGTACCGCACTGATCATTAAGATCACTGAGGTACTCAATTTCATCGGACTTTTGCGTAACATGCGGTAGGGCAATGATTGTCTCATCAGCTTCCTTGTATGAAAAAATTCtt > 2:658483/2‑151 (MQ=255)
agaAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTa < 4:388967/151‑1 (MQ=255)
gaAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTaa < 7:469843/151‑1 (MQ=255)
aGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTAAGc > 3:683010/1‑151 (MQ=255)
aaaTCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTAAGCAtt > 6:844487/1‑151 (MQ=255)
aaaTCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTAAGCAt < 5:277350/150‑1 (MQ=255)
aaTCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTAAGCATTa < 1:546791/151‑1 (MQ=255)
tCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTAAGCATTAt > 4:1442205/1‑150 (MQ=255)
cAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTAAGCATTAtc < 8:1059127/150‑1 (MQ=255)
aaGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTAAGCATTAtct < 1:911171/150‑1 (MQ=255)
gATGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGCACCTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTAAGCATTATctct > 2:1627870/1‑151 (MQ=255)
aTGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTAAGCATTATCTCtg < 1:604359/151‑1 (MQ=255)
aTGCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTAAGCATTATCTCtg > 4:967139/1‑151 (MQ=255)
gCACCACCAATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTAAGCATTATCTCtga < 1:284379/150‑1 (MQ=255)
accaATAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTAAGCATTATCTCTGATGAGGc < 8:350529/151‑1 (MQ=255)
aTAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTAAGCATTATCTCTGATGAGGCGGGt < 1:38884/151‑1 (MQ=255)
tAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTAAGCATTATCTCTGATGAGGCGGGt > 3:320798/1‑150 (MQ=255)
tAGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTAATCTGACGTTTTAGTAACATGCTGTAGGTAAATGAATGTCTAATAAGCTTCCTTGTTTAACAAATTTCTGAAGCATTATCTATCATGAGGAGGGt > 6:665362/1‑150 (MQ=255)
aGCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTAAGCATTATCTCTGATGAGGCGGGTa < 1:1540987/150‑1 (MQ=255)
gCACCGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTAAGCATTATCTCTGATGAGGCGGGTAAt < 7:360639/151‑1 (MQ=255)
cACCGAGAACAGTACCGCACTGACCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTAAGCATTATCTCTGATGAGGCGGGTAAtt < 7:1267669/151‑1 (MQ=255)
ccGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTAAGCATTATCTCTGATGAGGCGGGTAATTCa < 6:994960/151‑1 (MQ=255)
cGAGAACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTAAGCATTATCTCTGATGAGGCGGGTAATTCa > 8:1160100/1‑150 (MQ=255)
agaACAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTAAGCATTATCTCTGATGAGGCGGGTAATTCAAAg < 5:1043959/151‑1 (MQ=255)
aaCAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTAAGCATTATCTCTGATGAGGCGGGTAATTCAAAggg < 1:1477701/151‑1 (MQ=255)
aCAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTAAGCATTATCTCTGATGAGGCGGGTAATTCAAAggg > 1:123292/1‑150 (MQ=255)
aCAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTAAGCATTATCTCTGATGAGGCGGGTAATTCAAAGGGa < 7:898995/151‑1 (MQ=255)
cAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTAAGCATTATCTCTGATGAGGCGGGTAATTCAAAggg > 2:1548821/1‑149 (MQ=255)
cAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTAAGCATTATCTCTGATGAGGCGGGTAATTCAAAggg > 7:694558/1‑149 (MQ=255)
cAGTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTAAGCATTATCTCTGATGAGGCGAGTAATTCAAAGGGAg < 7:1390124/151‑1 (MQ=255)
gTACCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTAAGCATTATCTCTGATGAGGCGGGTAATTCAAAGGGAGTa < 4:1146134/151‑1 (MQ=255)
aCCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTAAGCATTATCTCTGATGAGGCGGGTAATTCAAAGGGAGTaa < 6:536583/150‑1 (MQ=255)
aCCGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTAAGCATTATCTCTGATGAGGCGGGTAATTCAAAGGGAGTaa < 2:194019/150‑1 (MQ=255)
cGCACTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTAAGCATTATCTCTGATGAGGCGTGTAATTCAAAGGGAGTAAGaa < 8:1314372/151‑1 (MQ=255)
aCTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTAAGCATTATCTCTGATGAGGCGGGTAATTCAAAGGGAGTAAGAATg > 1:97772/1‑150 (MQ=255)
aCTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTAAGCATTATCTCTGATGAGGCGGGTAATTCAAAGGGAGTAAGAATGa < 7:284579/151‑1 (MQ=255)
cTGATCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTAAGCATTATCTCTGATGAGGCGGGTAATTCAAAGGGAGTAAGAATGAt > 6:1657708/1‑151 (MQ=255)
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GCAAGCCCTGACGGATTTCCGGCGAGTCGGCGAGGGTACGCGCCACTGCCAGTGCCTTGTTGGCTAGCCCATCTCGCGTCATATCACTGATTTGCGAGAAGTAAATCAGATGCACCACCAATAGCACCGAGAACAGTACCGCACTGACCATTAAGATCACTGTGGTACTCAATTTCATCGGACGTTTGCGTAACATGCGGTAGGGCAATGAATGTCTCATCAGCTTCCTTGTGTGACAAATTTCTTAAGCATTATCTCTGATGAGGCGGGTAATTCAAAGGGAGTAAGAATGATT > NC_000913/4351443‑4351737
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
